RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 ZNF706Q9Y5V0 76 aaPredicted RBP3.41□□□□□ -1.86
SGIP1-210ENST00000483060 CREBBPQ92793 2442 aa3.41□□□□□ -1.86
SGIP1-210ENST00000483060 PTPRZ1P23471 2315 aaPredicted RBP3.41□□□□□ -1.86
SGIP1-210ENST00000483060 ABCA2Q9BZC7 2435 aa3.4□□□□□ -1.86
SGIP1-210ENST00000483060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.4□□□□□ -1.87
SGIP1-210ENST00000483060 TRIOBPQ9H2D6 2365 aa3.39□□□□□ -1.87
SGIP1-210ENST00000483060 CFAP54Q96N23 3096 aa3.39□□□□□ -1.87
SGIP1-210ENST00000483060 KALRNO60229 2985 aa3.39□□□□□ -1.87
SGIP1-210ENST00000483060 HTN3P15516 51 aa3.39□□□□□ -1.87
SGIP1-210ENST00000483060 KRTAP10-1P60331 282 aa3.39□□□□□ -1.87
SGIP1-210ENST00000483060 DEFB135Q30KP9 77 aa3.39□□□□□ -1.87
SGIP1-210ENST00000483060 AKAP6Q13023 2319 aa3.38□□□□□ -1.87
SGIP1-210ENST00000483060 ACACAQ13085 2346 aa3.38□□□□□ -1.87
SGIP1-210ENST00000483060 FRYLO94915 3013 aa3.38□□□□□ -1.87
SGIP1-210ENST00000483060 ROMO1P60602 79 aa3.38□□□□□ -1.87
SGIP1-210ENST00000483060 CSAG1Q6PB30 78 aa3.38□□□□□ -1.87
SGIP1-210ENST00000483060 ZFHX3Q15911 3703 aa3.38□□□□□ -1.87
SGIP1-210ENST00000483060 DSPP15924 2871 aaKnown RBP3.37□□□□□ -1.87
SGIP1-210ENST00000483060 CFAP47Q6ZTR5 3102 aa3.37□□□□□ -1.87
SGIP1-210ENST00000483060 C1orf134Q5TEV5 83 aa3.37□□□□□ -1.87
SGIP1-210ENST00000483060 FREM2Q5SZK8 3169 aa3.37□□□□□ -1.87
SGIP1-210ENST00000483060 OTOGLQ3ZCN5 2332 aa3.36□□□□□ -1.87
SGIP1-210ENST00000483060 K7ERS5 55 aa3.36□□□□□ -1.87
SGIP1-210ENST00000483060 ZNF861PO60384 105 aa3.36□□□□□ -1.87
SGIP1-210ENST00000483060 IGLV7-43P04211 117 aa3.36□□□□□ -1.87
SGIP1-210ENST00000483060 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
SGIP1-210ENST00000483060 SPEGQ15772 3267 aa3.36□□□□□ -1.87
SGIP1-210ENST00000483060 SPTBN5Q9NRC6 3674 aaKnown RBP3.36□□□□□ -1.87
SGIP1-210ENST00000483060 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
SGIP1-210ENST00000483060 LINC00483Q53H64 154 aa3.35□□□□□ -1.87
SGIP1-210ENST00000483060 Q96NJ1 140 aa3.35□□□□□ -1.87
SGIP1-210ENST00000483060 SPTAN1Q13813 2472 aaKnown RBP3.35□□□□□ -1.87
SGIP1-210ENST00000483060 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
SGIP1-210ENST00000483060 FAM168BA1KXE4 195 aa3.34□□□□□ -1.87
SGIP1-210ENST00000483060 WDFY4Q6ZS81 3184 aa3.34□□□□□ -1.88
SGIP1-210ENST00000483060 C2CD3Q4AC94 2353 aa3.33□□□□□ -1.88
SGIP1-210ENST00000483060 LY6G6CO95867 125 aa3.33□□□□□ -1.88
SGIP1-210ENST00000483060 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
SGIP1-210ENST00000483060 NCOR1O75376 2440 aa3.33□□□□□ -1.88
SGIP1-210ENST00000483060 DCHS1Q96JQ0 3298 aa3.32□□□□□ -1.88
SGIP1-210ENST00000483060 DEFB4AO15263 64 aa3.32□□□□□ -1.88
SGIP1-210ENST00000483060 PRLHP81277 87 aa3.32□□□□□ -1.88
SGIP1-210ENST00000483060 ANAPC11Q9NYG5 84 aa3.32□□□□□ -1.88
SGIP1-210ENST00000483060 SPTA1P02549 2419 aa3.32□□□□□ -1.88
SGIP1-210ENST00000483060 MGAQ8IWI9 3026 aa3.31□□□□□ -1.88
SGIP1-210ENST00000483060 PRRC2CQ9Y520 2896 aaKnown RBP3.31□□□□□ -1.88
SGIP1-210ENST00000483060 TTC28Q96AY4 2481 aa3.31□□□□□ -1.88
SGIP1-210ENST00000483060 MYO15AQ9UKN7 3530 aa3.31□□□□□ -1.88
SGIP1-210ENST00000483060 CELSR3Q9NYQ7 3312 aa3.3□□□□□ -1.88
SGIP1-210ENST00000483060 DMXL2Q8TDJ6 3036 aa3.29□□□□□ -1.88
SGIP1-210ENST00000483060 A8MUU9 505 aa3.29□□□□□ -1.88
SGIP1-210ENST00000483060 SSBP3-AS1Q7Z2R9 100 aa3.29□□□□□ -1.88
SGIP1-210ENST00000483060 KRTAP13-1Q8IUC0 172 aa3.29□□□□□ -1.88
SGIP1-210ENST00000483060 CSPG4Q6UVK1 2322 aa3.27□□□□□ -1.89
SGIP1-210ENST00000483060 A0A096LNI7 61 aa3.27□□□□□ -1.89
SGIP1-210ENST00000483060 A0A0G2JQZ4 141 aa3.27□□□□□ -1.89
SGIP1-210ENST00000483060 A0A1W2PNN7 141 aa3.27□□□□□ -1.89
SGIP1-210ENST00000483060 Q5W150 140 aa3.27□□□□□ -1.89
SGIP1-210ENST00000483060 MUC3AQ02505 3323 aa3.27□□□□□ -1.89
SGIP1-210ENST00000483060 TACC2O95359 2948 aa3.26□□□□□ -1.89
SGIP1-210ENST00000483060 ADGRG4Q8IZF6 3080 aa3.26□□□□□ -1.89
SGIP1-210ENST00000483060 AKAP13Q12802 2813 aa3.26□□□□□ -1.89
SGIP1-210ENST00000483060 EYSQ5T1H1 3165 aa3.25□□□□□ -1.89
SGIP1-210ENST00000483060 TLN1Q9Y490 2541 aaKnown RBP3.24□□□□□ -1.89
SGIP1-210ENST00000483060 NUPR2A6NF83 97 aa3.24□□□□□ -1.89
SGIP1-210ENST00000483060 COX6B2Q6YFQ2 88 aa3.24□□□□□ -1.89
SGIP1-210ENST00000483060 NBASA2RRP1 2371 aa3.24□□□□□ -1.89
SGIP1-210ENST00000483060 PIEZO1Q92508 2521 aa3.24□□□□□ -1.89
SGIP1-210ENST00000483060 ANKRD11Q6UB99 2663 aaPredicted RBP3.24□□□□□ -1.89
SGIP1-210ENST00000483060 HIVEP3Q5T1R4 2406 aa3.23□□□□□ -1.89
SGIP1-210ENST00000483060 PANO1I0J062 215 aa3.23□□□□□ -1.89
SGIP1-210ENST00000483060 HRNRQ86YZ3 2850 aaPredicted RBP3.23□□□□□ -1.89
SGIP1-210ENST00000483060 DMDP11532 3685 aa3.22□□□□□ -1.89
SGIP1-210ENST00000483060 BDP1A6H8Y1 2624 aa3.22□□□□□ -1.89
SGIP1-210ENST00000483060 CHTF8P0CG12 524 aa3.22□□□□□ -1.89
SGIP1-210ENST00000483060 LINC00304Q8N9R0 145 aa3.22□□□□□ -1.89
SGIP1-210ENST00000483060 SMG1Q96Q15 3661 aaKnown RBP3.22□□□□□ -1.89
SGIP1-210ENST00000483060 A0A1B0GU33 70 aa3.21□□□□□ -1.9
SGIP1-210ENST00000483060 SPG11Q96JI7 2443 aa3.21□□□□□ -1.9
SGIP1-210ENST00000483060 CACNA1AO00555 2505 aa3.21□□□□□ -1.9
SGIP1-210ENST00000483060 LOC400499M0QZD8 3231 aa3.21□□□□□ -1.9
SGIP1-210ENST00000483060 CSMD1Q96PZ7 3565 aa3.21□□□□□ -1.9
SGIP1-210ENST00000483060 KMT2BQ9UMN6 2715 aaPredicted RBP3.2□□□□□ -1.9
SGIP1-210ENST00000483060 MAP1AP78559 2803 aaPredicted RBP3.2□□□□□ -1.9
SGIP1-210ENST00000483060 ATRXP46100 2492 aa3.2□□□□□ -1.9
SGIP1-210ENST00000483060 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
SGIP1-210ENST00000483060 ZFHX4Q86UP3 3567 aa3.18□□□□□ -1.9
SGIP1-210ENST00000483060 CASC10Q5T4H9 136 aa3.18□□□□□ -1.9
SGIP1-210ENST00000483060 TYMSOSQ8TAI1 123 aa3.18□□□□□ -1.9
SGIP1-210ENST00000483060 LRBAP50851 2863 aa3.18□□□□□ -1.9
SGIP1-210ENST00000483060 SPENQ96T58 3664 aaKnown RBP3.17□□□□□ -1.9
SGIP1-210ENST00000483060 K7EIL1 84 aa3.17□□□□□ -1.9
SGIP1-210ENST00000483060 H1FX-AS1Q4G0G2 97 aa3.17□□□□□ -1.9
SGIP1-210ENST00000483060 Q6ZSA8 131 aa3.17□□□□□ -1.9
SGIP1-210ENST00000483060 DCHS2Q6V1P9 2916 aa3.17□□□□□ -1.9
SGIP1-210ENST00000483060 TLN2Q9Y4G6 2542 aa3.17□□□□□ -1.9
SGIP1-210ENST00000483060 NCOR2Q9Y618 2525 aa3.17□□□□□ -1.9
SGIP1-210ENST00000483060 SPACA4Q8TDM5 124 aa3.16□□□□□ -1.9
SGIP1-210ENST00000483060 C20orf166-AS1Q96NR2 134 aa3.16□□□□□ -1.9
SGIP1-210ENST00000483060 H0YAA0 97 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms