RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ORMDL2Q53FV1 153 aa4.23□□□□□ -1.73
CSDE1-206ENST00000483030 BAGE3Q86Y29 109 aa4.23□□□□□ -1.73
CSDE1-206ENST00000483030 NKAPP1Q8N9T2 125 aa4.23□□□□□ -1.73
CSDE1-206ENST00000483030 IGLV5-37A0A075B6J1 123 aa4.22□□□□□ -1.73
CSDE1-206ENST00000483030 IGKV2-28A0A075B6P5 120 aa4.22□□□□□ -1.73
CSDE1-206ENST00000483030 H3BT86 120 aa4.22□□□□□ -1.73
CSDE1-206ENST00000483030 IGKV2D-28P01615 120 aa4.22□□□□□ -1.73
CSDE1-206ENST00000483030 LINC01547P58512 204 aaPredicted RBP4.22□□□□□ -1.73
CSDE1-206ENST00000483030 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
CSDE1-206ENST00000483030 PRLHP81277 87 aa4.22□□□□□ -1.73
CSDE1-206ENST00000483030 ATP5L2Q7Z4Y8 100 aa4.22□□□□□ -1.73
CSDE1-206ENST00000483030 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.74
CSDE1-206ENST00000483030 NDUFS5O43920 106 aa4.21□□□□□ -1.74
CSDE1-206ENST00000483030 NPC2P61916 151 aa4.21□□□□□ -1.74
CSDE1-206ENST00000483030 PAPPA-AS1Q5QFB9 102 aa4.21□□□□□ -1.74
CSDE1-206ENST00000483030 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
CSDE1-206ENST00000483030 COX7B2Q8TF08 81 aa4.21□□□□□ -1.74
CSDE1-206ENST00000483030 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
CSDE1-206ENST00000483030 ATOX1O00244 68 aa4.2□□□□□ -1.74
CSDE1-206ENST00000483030 SPAG11AQ6PDA7 123 aa4.2□□□□□ -1.74
CSDE1-206ENST00000483030 C2orf91Q6ZV80 131 aa4.2□□□□□ -1.74
CSDE1-206ENST00000483030 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
CSDE1-206ENST00000483030 PCP2Q8IVA1 136 aa4.2□□□□□ -1.74
CSDE1-206ENST00000483030 CEND1Q8N111 149 aa4.2□□□□□ -1.74
CSDE1-206ENST00000483030 NXT2Q9NPJ8 142 aaKnown RBP4.2□□□□□ -1.74
CSDE1-206ENST00000483030 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 K7EMI3 77 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 IGKCP01834 107 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 ASB16-AS1Q495Z4 193 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 FP248Q71RG6 208 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-206ENST00000483030 TOMM6Q96B49 74 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 SCGB3A1Q96QR1 104 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 TIMM17AQ99595 171 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
CSDE1-206ENST00000483030 M0R378 163 aa4.18□□□□□ -1.74
CSDE1-206ENST00000483030 TCL1BO95988 128 aa4.18□□□□□ -1.74
CSDE1-206ENST00000483030 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
CSDE1-206ENST00000483030 IGLV5-45A0A087WSX0 123 aa4.17□□□□□ -1.74
CSDE1-206ENST00000483030 SCGB1C2P0DMR2 95 aa4.17□□□□□ -1.74
CSDE1-206ENST00000483030 DSCR8Q96T75 97 aa4.17□□□□□ -1.74
CSDE1-206ENST00000483030 HIGD2AQ9BW72 106 aa4.17□□□□□ -1.74
CSDE1-206ENST00000483030 SND1-IT1Q9HBX3 110 aa4.17□□□□□ -1.74
CSDE1-206ENST00000483030 HIGD1BQ9P298 99 aa4.17□□□□□ -1.74
CSDE1-206ENST00000483030 DAND5Q8N907 189 aa4.16□□□□□ -1.74
CSDE1-206ENST00000483030 SPRR4Q96PI1 79 aa4.16□□□□□ -1.74
CSDE1-206ENST00000483030 LGALS3P17931 250 aaKnown RBP4.15□□□□□ -1.75
CSDE1-206ENST00000483030 Q6ZVQ6 151 aa4.15□□□□□ -1.75
CSDE1-206ENST00000483030 Q8NBF4 154 aa4.15□□□□□ -1.75
CSDE1-206ENST00000483030 Q8NDZ9 215 aa4.15□□□□□ -1.75
CSDE1-206ENST00000483030 ACYP1P07311 99 aa4.14□□□□□ -1.75
CSDE1-206ENST00000483030 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-206ENST00000483030 ZNF625Q96I27 306 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-206ENST00000483030 IGLV5-39A0A0G2JS06 123 aa4.13□□□□□ -1.75
CSDE1-206ENST00000483030 hADV29S1A0JD25 119 aa4.13□□□□□ -1.75
CSDE1-206ENST00000483030 SPINK1P00995 79 aa4.13□□□□□ -1.75
CSDE1-206ENST00000483030 ZNF706Q9Y5V0 76 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-206ENST00000483030 LINC01549A6NIU2 74 aa4.12□□□□□ -1.75
CSDE1-206ENST00000483030 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
CSDE1-206ENST00000483030 COX17Q14061 63 aa4.12□□□□□ -1.75
CSDE1-206ENST00000483030 SERP2Q8N6R1 65 aa4.12□□□□□ -1.75
CSDE1-206ENST00000483030 ZNF73O43830 326 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-206ENST00000483030 ZNF22P17026 224 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-206ENST00000483030 PSMB2P49721 201 aa4.11□□□□□ -1.75
CSDE1-206ENST00000483030 TMEM170BQ5T4T1 132 aa4.11□□□□□ -1.75
CSDE1-206ENST00000483030 LCA10Q71F78 164 aa4.11□□□□□ -1.75
CSDE1-206ENST00000483030 SMCR5Q8TEV8 140 aa4.11□□□□□ -1.75
CSDE1-206ENST00000483030 LINC01546A6NGU7 62 aa4.1□□□□□ -1.75
CSDE1-206ENST00000483030 LINC00158P58513 81 aa4.1□□□□□ -1.75
CSDE1-206ENST00000483030 NDUFA12Q9UI09 145 aa4.1□□□□□ -1.75
CSDE1-206ENST00000483030 LINC00643Q86TS7 51 aa4.09□□□□□ -1.75
CSDE1-206ENST00000483030 Q8N377 158 aa4.09□□□□□ -1.75
CSDE1-206ENST00000483030 CHCHD1Q96BP2 118 aaKnown RBP4.09□□□□□ -1.75
CSDE1-206ENST00000483030 IGLV9-49A0A0B4J1Y8 123 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 ETDCA0A1B0GVM5 59 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 A8MUN3 132 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 LST1O00453 97 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 SLC25A20O43772 301 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 HBDP02042 147 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 MP68P56378 58 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 HERVK_113P61574 105 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 MT1HP80294 61 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 MOBPQ13875 183 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 KRTAP19-2Q3LHN2 52 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 LINC00483Q53H64 154 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 SSBP3-AS1Q7Z2R9 100 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 URB1-AS1Q96HZ7 61 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 KCNQ1DNQ9H478 68 aa4.08□□□□□ -1.76
CSDE1-206ENST00000483030 C11orf86A6NJI1 115 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 KRTAP4-16G5E9R7 235 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-206ENST00000483030 TMEM256-PLSCR3K7ERE1 68 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 NCR3O14931 201 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 TIMM17BO60830 172 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 SPRR1AP35321 89 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
CSDE1-206ENST00000483030 SFTA2Q6UW10 78 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 FAM19A2Q8N3H0 131 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 MPLKIPQ8TAP9 179 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
CSDE1-206ENST00000483030 A0A096LNJ9 63 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 454.3 ms