RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 IGHV3-30-5P0DP03 117 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 CKS2P33552 79 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 RNASE4P34096 147 aaKnown RBP1.58□□□□□ -2.16
GTF3A-207ENST00000482655 CRYBA4P53673 196 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 Q6Q795 121 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 S100A7AQ86SG5 101 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 ODF3Q96PU9 254 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 C22orf24Q9Y442 160 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 SPCS1Q9Y6A9 102 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
GTF3A-207ENST00000482655 TRAV7A0A075B6U4 112 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 TRAV26-2A0A0B4J265 109 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 MYMXA0A1B0GTQ4 84 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 SMIM9A6NGZ8 99 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 H7C2G1 150 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 IGHV3-33P01772 117 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 FABP2P12104 132 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 PLNP26678 52 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 CCL18P55774 89 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 TEN1Q86WV5 123 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 WFDC10BQ8IUB3 73 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 C10orf126Q8N4M7 172 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 ANKRD29Q8N6D5 301 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 Q8TAT8 98 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 PLEKHB2Q96CS7 222 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 PRO2289Q9P1D8 64 aa1.57□□□□□ -2.16
GTF3A-207ENST00000482655 TRBV20-1A0A075B6N2 111 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 TMSB15BA0A087X1C1 80 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 A0A0G2JQZ4 141 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 TRBV30A0A0K0K1B3 111 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 K7ERJ3 54 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 M0QY20 66 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 M0R2P5 195 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 GNG7O60262 68 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 TCL1BO95988 128 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 PPP1R17O96001 155 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 DEFB130BP0DP73 79 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 DEFB130AP0DP74 79 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 RPL28P46779 137 aaKnown RBP1.56□□□□□ -2.16
GTF3A-207ENST00000482655 MRPS36P82909 103 aaKnown RBP1.56□□□□□ -2.16
GTF3A-207ENST00000482655 ETDBQ3ZM63 59 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 Q6ZUT4 128 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 KTN1-AS1Q86SY8 53 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 Q8N814 137 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 Q8NDZ9 215 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 TMEM263Q8WUH6 116 aaKnown RBP1.56□□□□□ -2.16
GTF3A-207ENST00000482655 TMEM141Q96I45 108 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 NAA38Q9BRA0 125 aaKnown RBP1.56□□□□□ -2.16
GTF3A-207ENST00000482655 VPS25Q9BRG1 176 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 LINC00467Q9BRT7 94 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 DPH3P1Q9H4G8 78 aa1.56□□□□□ -2.16
GTF3A-207ENST00000482655 TRAV21A0A0B4J279 112 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 TIMM17BO60830 172 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 RHOHQ15669 191 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 TMEM78Q5T7P6 136 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 SAMD13Q5VXD3 122 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 LYPD5Q6UWN5 251 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 PPDPFLQ8WWR9 84 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 RPL39LQ96EH5 51 aaKnown RBP1.55□□□□□ -2.16
GTF3A-207ENST00000482655 PRADC1Q9BSG0 188 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 TIMM21Q9BVV7 248 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 SPANXDQ9BXN6 97 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 NHP2Q9NX24 153 aaKnown RBP1.55□□□□□ -2.16
GTF3A-207ENST00000482655 SPANXCQ9NY87 97 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 ERG28Q9UKR5 140 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 PKIGQ9Y2B9 76 aa1.55□□□□□ -2.16
GTF3A-207ENST00000482655 TRAV12-2A0A075B6T6 113 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 LOC107984156A0A0G2JMH3 177 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 TRBV7-7A0A0K0K1E9 115 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 TMEM262E9PQX1 116 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 H3BNG1 76 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 MT-ATP8P03928 68 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 RPL37AP61513 92 aaKnown RBP1.54□□□□□ -2.16
GTF3A-207ENST00000482655 SPINK13Q1W4C9 94 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 KRTAP6-3Q3LI67 103 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 ARL17AQ8IVW1 177 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 RAB37Q96AX2 223 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 AP1S3Q96PC3 154 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 CYSLTR1Q9Y271 337 aa1.54□□□□□ -2.16
GTF3A-207ENST00000482655 IGHV1-58A0A0C4DH39 117 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 TRBV10-2A0A0K0K1G8 114 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 A0A1B0GV72 72 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 ZNF815PA8K554 130 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 H3BVH4 76 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 J3QR89 54 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 LINC00694P0DN24 101 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 IFITM1P13164 125 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 RPL39P62891 51 aaKnown RBP1.53□□□□□ -2.16
GTF3A-207ENST00000482655 C2orf82Q6UX34 121 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 C5orf38Q86SI9 138 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 OBSCN-AS1Q96MR7 158 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 SCGB3A1Q96QR1 104 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 KRTAP4-1Q9BYQ7 146 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 IMUPQ9GZP8 106 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 NOP10Q9NPE3 64 aaKnown RBP1.53□□□□□ -2.16
GTF3A-207ENST00000482655 SPANXA1Q9NS26 97 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 PRO1854Q9UHT4 67 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 UBE2D4Q9Y2X8 147 aa1.53□□□□□ -2.16
GTF3A-207ENST00000482655 TRAV4A0A0B4J268 109 aa1.52□□□□□ -2.17
GTF3A-207ENST00000482655 IBA57-AS1B1ANH7 110 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms