RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 MOBPQ13875 183 aa7.81□□□□□ -1.16
HDAC1-208ENST00000482310 TEX49A0A1B0GTD5 131 aa7.8□□□□□ -1.16
HDAC1-208ENST00000482310 LINC01547P58512 204 aaPredicted RBP7.8□□□□□ -1.16
HDAC1-208ENST00000482310 DNAL4O96015 105 aa7.79□□□□□ -1.16
HDAC1-208ENST00000482310 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
HDAC1-208ENST00000482310 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.79□□□□□ -1.16
HDAC1-208ENST00000482310 Q8N377 158 aa7.79□□□□□ -1.16
HDAC1-208ENST00000482310 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
HDAC1-208ENST00000482310 C9orf118A6NHY6 69 aa7.78□□□□□ -1.16
HDAC1-208ENST00000482310 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
HDAC1-208ENST00000482310 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
HDAC1-208ENST00000482310 COL5A1-AS1Q5SY13 56 aa7.77□□□□□ -1.17
HDAC1-208ENST00000482310 LST1O00453 97 aa7.76□□□□□ -1.17
HDAC1-208ENST00000482310 TCL1BO95988 128 aa7.76□□□□□ -1.17
HDAC1-208ENST00000482310 SPRR1BP22528 89 aa7.76□□□□□ -1.17
HDAC1-208ENST00000482310 A0A1B0GX51 115 aa7.75□□□□□ -1.17
HDAC1-208ENST00000482310 SMIM29Q86T20 159 aa7.75□□□□□ -1.17
HDAC1-208ENST00000482310 Q8NBF4 154 aa7.75□□□□□ -1.17
HDAC1-208ENST00000482310 A0A1B0GV72 72 aa7.74□□□□□ -1.17
HDAC1-208ENST00000482310 FABP2P12104 132 aa7.74□□□□□ -1.17
HDAC1-208ENST00000482310 ATXN8Q156A1 80 aa7.74□□□□□ -1.17
HDAC1-208ENST00000482310 LYRM7Q5U5X0 104 aa7.74□□□□□ -1.17
HDAC1-208ENST00000482310 ORMDL1Q9P0S3 153 aa7.74□□□□□ -1.17
HDAC1-208ENST00000482310 A0A1W2PPM0 123 aa7.73□□□□□ -1.17
HDAC1-208ENST00000482310 F8WEM9 126 aa7.73□□□□□ -1.17
HDAC1-208ENST00000482310 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
HDAC1-208ENST00000482310 A0A0G2JQZ4 141 aa7.72□□□□□ -1.17
HDAC1-208ENST00000482310 TRACP01848 142 aa7.72□□□□□ -1.17
HDAC1-208ENST00000482310 OCIAD2Q56VL3 154 aa7.71□□□□□ -1.18
HDAC1-208ENST00000482310 HRCT1Q6UXD1 115 aa7.71□□□□□ -1.18
HDAC1-208ENST00000482310 PPDPFLQ8WWR9 84 aa7.69□□□□□ -1.18
HDAC1-208ENST00000482310 NDUFV3P56181 108 aaKnown RBP7.68□□□□□ -1.18
HDAC1-208ENST00000482310 MTURNQ8N3F0 131 aa7.68□□□□□ -1.18
HDAC1-208ENST00000482310 SPCS1Q9Y6A9 102 aa7.68□□□□□ -1.18
HDAC1-208ENST00000482310 TRBV20-1A0A075B6N2 111 aa7.67□□□□□ -1.18
HDAC1-208ENST00000482310 C9JAW5 83 aa7.67□□□□□ -1.18
HDAC1-208ENST00000482310 SSBP3-AS1Q7Z2R9 100 aa7.67□□□□□ -1.18
HDAC1-208ENST00000482310 H3BMG7 143 aa7.66□□□□□ -1.18
HDAC1-208ENST00000482310 GHRHP01286 108 aa7.66□□□□□ -1.18
HDAC1-208ENST00000482310 BAALC-AS2P0C853 105 aa7.66□□□□□ -1.18
HDAC1-208ENST00000482310 TMEM256-PLSCR3K7ERE1 68 aa7.65□□□□□ -1.18
HDAC1-208ENST00000482310 IGFL1Q6UW32 110 aa7.64□□□□□ -1.19
HDAC1-208ENST00000482310 H3BQ85 93 aa7.62□□□□□ -1.19
HDAC1-208ENST00000482310 ANKRD29Q8N6D5 301 aa7.62□□□□□ -1.19
HDAC1-208ENST00000482310 RETNLBQ9BQ08 111 aa7.62□□□□□ -1.19
HDAC1-208ENST00000482310 K7EP34 96 aa7.61□□□□□ -1.19
HDAC1-208ENST00000482310 SPAG11AQ6PDA7 123 aa7.61□□□□□ -1.19
HDAC1-208ENST00000482310 IGLV8-61A0A075B6I0 122 aa7.6□□□□□ -1.19
HDAC1-208ENST00000482310 UBE2V1Q13404 147 aa7.6□□□□□ -1.19
HDAC1-208ENST00000482310 Q6JHZ5 121 aa7.6□□□□□ -1.19
HDAC1-208ENST00000482310 SPINK1P00995 79 aa7.59□□□□□ -1.19
HDAC1-208ENST00000482310 LRP2P98164 4655 aa7.58□□□□□ -1.2
HDAC1-208ENST00000482310 PRR4Q16378 134 aa7.56□□□□□ -1.2
HDAC1-208ENST00000482310 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
HDAC1-208ENST00000482310 GTF2H5Q6ZYL4 71 aa7.56□□□□□ -1.2
HDAC1-208ENST00000482310 VPS25Q9BRG1 176 aa7.56□□□□□ -1.2
HDAC1-208ENST00000482310 RNF213Q63HN8 5207 aa7.56□□□□□ -1.2
HDAC1-208ENST00000482310 H3BT86 120 aa7.55□□□□□ -1.2
HDAC1-208ENST00000482310 RBM3P98179 157 aaKnown RBP7.55□□□□□ -1.2
HDAC1-208ENST00000482310 CD164Q04900 197 aa7.55□□□□□ -1.2
HDAC1-208ENST00000482310 DSCR8Q96T75 97 aa7.54□□□□□ -1.2
HDAC1-208ENST00000482310 LIMD2Q9BT23 127 aa7.54□□□□□ -1.2
HDAC1-208ENST00000482310 TRBV7-7A0A0K0K1E9 115 aa7.53□□□□□ -1.2
HDAC1-208ENST00000482310 C14orf132Q9NPU4 83 aa7.53□□□□□ -1.2
HDAC1-208ENST00000482310 A0A1B0GV90 55 aa7.52□□□□□ -1.21
HDAC1-208ENST00000482310 A0A1W2PNM2 257 aa7.52□□□□□ -1.21
HDAC1-208ENST00000482310 CCKP06307 115 aa7.52□□□□□ -1.21
HDAC1-208ENST00000482310 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
HDAC1-208ENST00000482310 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
HDAC1-208ENST00000482310 TRBV7-4A0A0J9YYF1 115 aa7.5□□□□□ -1.21
HDAC1-208ENST00000482310 JMJD7-PLA2G4BH0Y9G9 81 aa7.5□□□□□ -1.21
HDAC1-208ENST00000482310 PRO0461Q9UI25 63 aa7.5□□□□□ -1.21
HDAC1-208ENST00000482310 A0A087WSZ3 146 aa7.49□□□□□ -1.21
HDAC1-208ENST00000482310 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
HDAC1-208ENST00000482310 Q6Q795 121 aa7.46□□□□□ -1.22
HDAC1-208ENST00000482310 Q6ZQT0 140 aa7.46□□□□□ -1.22
HDAC1-208ENST00000482310 OBSCN-AS1Q96MR7 158 aa7.46□□□□□ -1.22
HDAC1-208ENST00000482310 IGLV7-46A0A075B6I9 117 aa7.45□□□□□ -1.22
HDAC1-208ENST00000482310 LOC110117498A0A087WWA1 95 aa7.44□□□□□ -1.22
HDAC1-208ENST00000482310 SS18L2Q9UHA2 77 aa7.44□□□□□ -1.22
HDAC1-208ENST00000482310 F8W1H4 67 aa7.43□□□□□ -1.22
HDAC1-208ENST00000482310 C1orf195Q5TG92 126 aa7.43□□□□□ -1.22
HDAC1-208ENST00000482310 LPAP08519 4548 aa7.42□□□□□ -1.22
HDAC1-208ENST00000482310 Q5XG85 94 aa7.42□□□□□ -1.22
HDAC1-208ENST00000482310 ETDBQ3ZM63 59 aa7.41□□□□□ -1.22
HDAC1-208ENST00000482310 FP248Q71RG6 208 aaPredicted RBP7.41□□□□□ -1.22
HDAC1-208ENST00000482310 PDE6GP18545 87 aa7.4□□□□□ -1.22
HDAC1-208ENST00000482310 DEFB116Q30KQ4 102 aa7.39□□□□□ -1.23
HDAC1-208ENST00000482310 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
HDAC1-208ENST00000482310 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
HDAC1-208ENST00000482310 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
HDAC1-208ENST00000482310 Q96NJ1 140 aa7.36□□□□□ -1.23
HDAC1-208ENST00000482310 IGKV4-1P06312 121 aa7.34□□□□□ -1.23
HDAC1-208ENST00000482310 TPRXLQ17RH7 258 aa7.33□□□□□ -1.24
HDAC1-208ENST00000482310 KRTAP13-3Q3SY46 172 aa7.33□□□□□ -1.24
HDAC1-208ENST00000482310 CDIP1Q9H305 208 aa7.33□□□□□ -1.24
HDAC1-208ENST00000482310 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
HDAC1-208ENST00000482310 LINC00472Q9H8W2 130 aa7.31□□□□□ -1.24
HDAC1-208ENST00000482310 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
HDAC1-208ENST00000482310 NREPQ16612 68 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms