RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 LCE6AA0A183 80 aa9.15□□□□□ -0.94
CCDC78-211ENST00000481804 PSPHP1O15172 72 aa9.15□□□□□ -0.94
CCDC78-211ENST00000481804 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
CCDC78-211ENST00000481804 IGFL1Q6UW32 110 aa9.14□□□□□ -0.95
CCDC78-211ENST00000481804 ZCCHC13Q8WW36 166 aaKnown RBP9.12□□□□□ -0.95
CCDC78-211ENST00000481804 LINC00208Q96KT6 92 aa9.12□□□□□ -0.95
CCDC78-211ENST00000481804 NDUFB1O75438 58 aa9.12□□□□□ -0.95
CCDC78-211ENST00000481804 RPL37AP61513 92 aaKnown RBP9.11□□□□□ -0.95
CCDC78-211ENST00000481804 UBE2AP49459 152 aa9.1□□□□□ -0.95
CCDC78-211ENST00000481804 SEC61GP60059 68 aa9.1□□□□□ -0.95
CCDC78-211ENST00000481804 Q1T7F1 81 aa9.07□□□□□ -0.96
CCDC78-211ENST00000481804 V9GYY9 64 aa9.07□□□□□ -0.96
CCDC78-211ENST00000481804 TRAV22A0A0B4J277 110 aa9.06□□□□□ -0.96
CCDC78-211ENST00000481804 A0A096LNI7 61 aa9.05□□□□□ -0.96
CCDC78-211ENST00000481804 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
CCDC78-211ENST00000481804 CYP4F30PQ9H0H9 118 aa9.05□□□□□ -0.96
CCDC78-211ENST00000481804 H0Y9P7 68 aa9.04□□□□□ -0.96
CCDC78-211ENST00000481804 KRTAP24-1Q3LI83 254 aa9.04□□□□□ -0.96
CCDC78-211ENST00000481804 B9D2Q9BPU9 175 aa9.04□□□□□ -0.96
CCDC78-211ENST00000481804 A8MUN3 132 aa9.01□□□□□ -0.97
CCDC78-211ENST00000481804 H0Y9J4 135 aa9.01□□□□□ -0.97
CCDC78-211ENST00000481804 C16orf90A8MZG2 172 aa9□□□□□ -0.97
CCDC78-211ENST00000481804 CMYA5Q8N3K9 4069 aa9□□□□□ -0.97
CCDC78-211ENST00000481804 PRR15Q8IV56 129 aa8.98□□□□□ -0.97
CCDC78-211ENST00000481804 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
CCDC78-211ENST00000481804 CHTF8P0CG12 524 aa8.97□□□□□ -0.97
CCDC78-211ENST00000481804 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
CCDC78-211ENST00000481804 STAB2Q8WWQ8 2551 aa8.96□□□□□ -0.98
CCDC78-211ENST00000481804 A8MWP4 228 aa8.95□□□□□ -0.98
CCDC78-211ENST00000481804 KRTAP29-1A8MX34 341 aaPredicted RBP8.95□□□□□ -0.98
CCDC78-211ENST00000481804 UBE2DNLQ8IWF7 75 aa8.95□□□□□ -0.98
CCDC78-211ENST00000481804 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
CCDC78-211ENST00000481804 SRRM2Q9UQ35 2752 aaKnown RBP8.94□□□□□ -0.98
CCDC78-211ENST00000481804 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
CCDC78-211ENST00000481804 H3BPC8 53 aa8.93□□□□□ -0.98
CCDC78-211ENST00000481804 TENM2Q9NT68 2774 aa8.93□□□□□ -0.98
CCDC78-211ENST00000481804 PMAIP1Q13794 54 aa8.92□□□□□ -0.98
CCDC78-211ENST00000481804 PRR15LQ9BU68 103 aa8.92□□□□□ -0.98
CCDC78-211ENST00000481804 SPANXA2-OT1Q8N9U9 137 aa8.91□□□□□ -0.98
CCDC78-211ENST00000481804 CSMD3Q7Z407 3707 aa8.91□□□□□ -0.98
CCDC78-211ENST00000481804 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
CCDC78-211ENST00000481804 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.99
CCDC78-211ENST00000481804 LINC00472Q9H8W2 130 aa8.89□□□□□ -0.99
CCDC78-211ENST00000481804 LYSTQ99698 3801 aa8.89□□□□□ -0.99
CCDC78-211ENST00000481804 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
CCDC78-211ENST00000481804 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
CCDC78-211ENST00000481804 Q5VV11 94 aa8.88□□□□□ -0.99
CCDC78-211ENST00000481804 COL7A1Q02388 2944 aa8.87□□□□□ -0.99
CCDC78-211ENST00000481804 IGLV9-49A0A0B4J1Y8 123 aa8.87□□□□□ -0.99
CCDC78-211ENST00000481804 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
CCDC78-211ENST00000481804 NDUFS5O43920 106 aa8.86□□□□□ -0.99
CCDC78-211ENST00000481804 Q8N9P0 234 aaPredicted RBP8.86□□□□□ -0.99
CCDC78-211ENST00000481804 A8MU10 97 aa8.85□□□□□ -0.99
CCDC78-211ENST00000481804 SPTSSBQ8NFR3 76 aa8.85□□□□□ -0.99
CCDC78-211ENST00000481804 SPRR1BP22528 89 aa8.84□□□□□ -0.99
CCDC78-211ENST00000481804 COA5Q86WW8 74 aa8.84□□□□□ -0.99
CCDC78-211ENST00000481804 MMP24-AS1A0A0U1RRL7 71 aa8.84□□□□□ -0.99
CCDC78-211ENST00000481804 A6NED7 52 aa8.82□□□□□ -1
CCDC78-211ENST00000481804 C9orf163Q8N9P6 203 aa8.82□□□□□ -1
CCDC78-211ENST00000481804 K7EIL1 84 aa8.8□□□□□ -1
CCDC78-211ENST00000481804 CDK2AP2O75956 126 aa8.8□□□□□ -1
CCDC78-211ENST00000481804 DNAH3Q8TD57 4116 aa8.79□□□□□ -1
CCDC78-211ENST00000481804 IGHV6-1A0A0B4J1U7 121 aa8.79□□□□□ -1
CCDC78-211ENST00000481804 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
CCDC78-211ENST00000481804 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
CCDC78-211ENST00000481804 TP53AIP1Q9HCN2 124 aa8.76□□□□□ -1.01
CCDC78-211ENST00000481804 DNAH10Q8IVF4 4471 aa8.76□□□□□ -1.01
CCDC78-211ENST00000481804 SPAG11AQ6PDA7 123 aa8.76□□□□□ -1.01
CCDC78-211ENST00000481804 MOBPQ13875 183 aa8.75□□□□□ -1.01
CCDC78-211ENST00000481804 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
CCDC78-211ENST00000481804 CD164Q04900 197 aa8.74□□□□□ -1.01
CCDC78-211ENST00000481804 PANO1I0J062 215 aa8.73□□□□□ -1.01
CCDC78-211ENST00000481804 Q75L30 129 aa8.71□□□□□ -1.02
CCDC78-211ENST00000481804 LOC101927531A0A1B0GV80 90 aa8.69□□□□□ -1.02
CCDC78-211ENST00000481804 APLNQ9ULZ1 77 aa8.69□□□□□ -1.02
CCDC78-211ENST00000481804 A0A1B0GVX0 72 aa8.69□□□□□ -1.02
CCDC78-211ENST00000481804 Q96NJ1 140 aa8.69□□□□□ -1.02
CCDC78-211ENST00000481804 LCA10Q71F78 164 aa8.68□□□□□ -1.02
CCDC78-211ENST00000481804 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
CCDC78-211ENST00000481804 KRTAP13-1Q8IUC0 172 aa8.67□□□□□ -1.02
CCDC78-211ENST00000481804 ATP11AUNQ6ZP68 121 aa8.67□□□□□ -1.02
CCDC78-211ENST00000481804 ANAPC11Q9NYG5 84 aa8.67□□□□□ -1.02
CCDC78-211ENST00000481804 MRPL34Q9BQ48 92 aaKnown RBP8.66□□□□□ -1.02
CCDC78-211ENST00000481804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.66□□□□□ -1.02
CCDC78-211ENST00000481804 DNAH7Q8WXX0 4024 aa8.66□□□□□ -1.02
CCDC78-211ENST00000481804 DNAH1Q9P2D7 4330 aa8.66□□□□□ -1.02
CCDC78-211ENST00000481804 NBDYA0A0U1RRE5 68 aa8.65□□□□□ -1.02
CCDC78-211ENST00000481804 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
CCDC78-211ENST00000481804 Q6ZR54 194 aa8.64□□□□□ -1.03
CCDC78-211ENST00000481804 DNAH9Q9NYC9 4486 aa8.64□□□□□ -1.03
CCDC78-211ENST00000481804 KTN1-AS1Q86SY8 53 aa8.63□□□□□ -1.03
CCDC78-211ENST00000481804 HRES1P13985 223 aa8.62□□□□□ -1.03
CCDC78-211ENST00000481804 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
CCDC78-211ENST00000481804 LINC01558Q9Y6Z2 57 aa8.62□□□□□ -1.03
CCDC78-211ENST00000481804 ASB16-AS1Q495Z4 193 aa8.61□□□□□ -1.03
CCDC78-211ENST00000481804 MDFIQ99750 246 aa8.61□□□□□ -1.03
CCDC78-211ENST00000481804 A0A087X002 238 aa8.61□□□□□ -1.03
CCDC78-211ENST00000481804 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
CCDC78-211ENST00000481804 SPACA4Q8TDM5 124 aa8.61□□□□□ -1.03
CCDC78-211ENST00000481804 WWC2-AS2Q96NR7 200 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms