RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 FLNAP21333 2647 aaKnown RBP7.27□□□□□ -1.25
DDX39B-219ENST00000481456 LRBAP50851 2863 aa7.26□□□□□ -1.25
DDX39B-219ENST00000481456 TNP2Q05952 138 aa7.26□□□□□ -1.25
DDX39B-219ENST00000481456 Q5VV11 94 aa7.25□□□□□ -1.25
DDX39B-219ENST00000481456 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
DDX39B-219ENST00000481456 IGLV8-61A0A075B6I0 122 aa7.24□□□□□ -1.25
DDX39B-219ENST00000481456 LCA10Q71F78 164 aa7.23□□□□□ -1.25
DDX39B-219ENST00000481456 TACC2O95359 2948 aa7.22□□□□□ -1.25
DDX39B-219ENST00000481456 UQCR11O14957 56 aa7.21□□□□□ -1.25
DDX39B-219ENST00000481456 STAB1Q9NY15 2570 aa7.21□□□□□ -1.25
DDX39B-219ENST00000481456 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
DDX39B-219ENST00000481456 MMP24-AS1A0A0U1RRL7 71 aa7.21□□□□□ -1.26
DDX39B-219ENST00000481456 CHD6Q8TD26 2715 aa7.2□□□□□ -1.26
DDX39B-219ENST00000481456 LINC01558Q9Y6Z2 57 aa7.19□□□□□ -1.26
DDX39B-219ENST00000481456 KRTAP4-16G5E9R7 235 aaPredicted RBP7.19□□□□□ -1.26
DDX39B-219ENST00000481456 ZNF861PO60384 105 aa7.18□□□□□ -1.26
DDX39B-219ENST00000481456 MIR22HGQ0VDD5 57 aa7.18□□□□□ -1.26
DDX39B-219ENST00000481456 K7EIL1 84 aa7.18□□□□□ -1.26
DDX39B-219ENST00000481456 LINC00472Q9H8W2 130 aa7.17□□□□□ -1.26
DDX39B-219ENST00000481456 ITPR3Q14573 2671 aa7.17□□□□□ -1.26
DDX39B-219ENST00000481456 RBM12B-AS1Q9P1G2 102 aa7.17□□□□□ -1.26
DDX39B-219ENST00000481456 LCE6AA0A183 80 aa7.16□□□□□ -1.26
DDX39B-219ENST00000481456 SPRR1BP22528 89 aa7.16□□□□□ -1.26
DDX39B-219ENST00000481456 CENPEQ02224 2701 aa7.16□□□□□ -1.26
DDX39B-219ENST00000481456 COX6B2Q6YFQ2 88 aa7.14□□□□□ -1.27
DDX39B-219ENST00000481456 Q96NJ1 140 aa7.14□□□□□ -1.27
DDX39B-219ENST00000481456 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
DDX39B-219ENST00000481456 WDFY3Q8IZQ1 3526 aa7.14□□□□□ -1.27
DDX39B-219ENST00000481456 HELZ2Q9BYK8 2649 aaKnown RBP7.14□□□□□ -1.27
DDX39B-219ENST00000481456 GCN1Q92616 2671 aaKnown RBP7.13□□□□□ -1.27
DDX39B-219ENST00000481456 LOC400499M0QZD8 3231 aa7.13□□□□□ -1.27
DDX39B-219ENST00000481456 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
DDX39B-219ENST00000481456 MAP1AP78559 2803 aaPredicted RBP7.13□□□□□ -1.27
DDX39B-219ENST00000481456 PRR26Q8N8Z3 221 aa7.13□□□□□ -1.27
DDX39B-219ENST00000481456 TNRC18O15417 2968 aaPredicted RBP7.12□□□□□ -1.27
DDX39B-219ENST00000481456 PSORS1C2Q9UIG4 136 aa7.12□□□□□ -1.27
DDX39B-219ENST00000481456 APLNQ9ULZ1 77 aa7.12□□□□□ -1.27
DDX39B-219ENST00000481456 SETXQ7Z333 2677 aaKnown RBP7.12□□□□□ -1.27
DDX39B-219ENST00000481456 KRTAP29-1A8MX34 341 aaPredicted RBP7.11□□□□□ -1.27
DDX39B-219ENST00000481456 ATMQ13315 3056 aa7.11□□□□□ -1.27
DDX39B-219ENST00000481456 HRES1P13985 223 aa7.1□□□□□ -1.27
DDX39B-219ENST00000481456 A0A087WTM6 91 aa7.1□□□□□ -1.27
DDX39B-219ENST00000481456 HRNRQ86YZ3 2850 aaPredicted RBP7.08□□□□□ -1.28
DDX39B-219ENST00000481456 LINC00304Q8N9R0 145 aa7.07□□□□□ -1.28
DDX39B-219ENST00000481456 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
DDX39B-219ENST00000481456 DMXL2Q8TDJ6 3036 aa7.06□□□□□ -1.28
DDX39B-219ENST00000481456 TEX15Q9BXT5 2789 aa7.05□□□□□ -1.28
DDX39B-219ENST00000481456 SPINK7P58062 85 aa7.05□□□□□ -1.28
DDX39B-219ENST00000481456 NBEAL2Q6ZNJ1 2754 aa7.04□□□□□ -1.28
DDX39B-219ENST00000481456 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.29
DDX39B-219ENST00000481456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.02□□□□□ -1.29
DDX39B-219ENST00000481456 Q6ZR54 194 aa7.01□□□□□ -1.29
DDX39B-219ENST00000481456 CFAP47Q6ZTR5 3102 aa6.99□□□□□ -1.29
DDX39B-219ENST00000481456 KRTAP7-1Q8IUC3 87 aa6.98□□□□□ -1.29
DDX39B-219ENST00000481456 UNC79Q9P2D8 2635 aa6.98□□□□□ -1.29
DDX39B-219ENST00000481456 KRTAP1-5Q9BYS1 174 aa6.98□□□□□ -1.29
DDX39B-219ENST00000481456 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
DDX39B-219ENST00000481456 CFAP46Q8IYW2 2715 aa6.98□□□□□ -1.29
DDX39B-219ENST00000481456 ZFHX4Q86UP3 3567 aa6.97□□□□□ -1.29
DDX39B-219ENST00000481456 IGSF10Q6WRI0 2623 aa6.97□□□□□ -1.29
DDX39B-219ENST00000481456 DMXL1Q9Y485 3027 aa6.97□□□□□ -1.29
DDX39B-219ENST00000481456 ITPR1Q14643 2758 aa6.96□□□□□ -1.3
DDX39B-219ENST00000481456 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
DDX39B-219ENST00000481456 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
DDX39B-219ENST00000481456 TEP1Q99973 2627 aaKnown RBP6.95□□□□□ -1.3
DDX39B-219ENST00000481456 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
DDX39B-219ENST00000481456 C9orf92A6NGG3 77 aa6.94□□□□□ -1.3
DDX39B-219ENST00000481456 LINC00483Q53H64 154 aa6.94□□□□□ -1.3
DDX39B-219ENST00000481456 COL12A1Q99715 3063 aa6.94□□□□□ -1.3
DDX39B-219ENST00000481456 Q5W150 140 aa6.94□□□□□ -1.3
DDX39B-219ENST00000481456 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
DDX39B-219ENST00000481456 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
DDX39B-219ENST00000481456 A6NN06 94 aa6.92□□□□□ -1.3
DDX39B-219ENST00000481456 Q8N1X5 172 aa6.91□□□□□ -1.3
DDX39B-219ENST00000481456 FLNCQ14315 2725 aa6.91□□□□□ -1.3
DDX39B-219ENST00000481456 DMAC1Q96GE9 116 aa6.9□□□□□ -1.31
DDX39B-219ENST00000481456 DCHS1Q96JQ0 3298 aa6.89□□□□□ -1.31
DDX39B-219ENST00000481456 DMDP11532 3685 aa6.89□□□□□ -1.31
DDX39B-219ENST00000481456 A8MU10 97 aa6.88□□□□□ -1.31
DDX39B-219ENST00000481456 SMG1Q96Q15 3661 aaKnown RBP6.87□□□□□ -1.31
DDX39B-219ENST00000481456 UTP20O75691 2785 aaKnown RBP6.87□□□□□ -1.31
DDX39B-219ENST00000481456 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
DDX39B-219ENST00000481456 ASB16-AS1Q495Z4 193 aa6.85□□□□□ -1.31
DDX39B-219ENST00000481456 PANO1I0J062 215 aa6.83□□□□□ -1.32
DDX39B-219ENST00000481456 CSMD1Q96PZ7 3565 aa6.83□□□□□ -1.32
DDX39B-219ENST00000481456 ASPMQ8IZT6 3477 aa6.83□□□□□ -1.32
DDX39B-219ENST00000481456 NBEAL1Q6ZS30 2694 aa6.83□□□□□ -1.32
DDX39B-219ENST00000481456 ZANQ9Y493 2812 aa6.82□□□□□ -1.32
DDX39B-219ENST00000481456 COL6A5A8TX70 2615 aa6.82□□□□□ -1.32
DDX39B-219ENST00000481456 A0A087X002 238 aa6.81□□□□□ -1.32
DDX39B-219ENST00000481456 CSAG1Q6PB30 78 aa6.81□□□□□ -1.32
DDX39B-219ENST00000481456 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
DDX39B-219ENST00000481456 A0A1B0GU33 70 aa6.8□□□□□ -1.32
DDX39B-219ENST00000481456 Q6ZSA8 131 aa6.8□□□□□ -1.32
DDX39B-219ENST00000481456 DCHS2Q6V1P9 2916 aa6.79□□□□□ -1.32
DDX39B-219ENST00000481456 NOTCH1P46531 2555 aa6.78□□□□□ -1.32
DDX39B-219ENST00000481456 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
DDX39B-219ENST00000481456 LUZP6Q538Z0 58 aa6.78□□□□□ -1.32
DDX39B-219ENST00000481456 KRTAP13-1Q8IUC0 172 aa6.78□□□□□ -1.32
DDX39B-219ENST00000481456 ASH1LQ9NR48 2969 aaKnown RBP6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms