RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	RRBP1	Q9P2E9	1410 aa	Known RBP	-0.06	□□□□□ -2.42
CCNL1-223	ENST00000481173	DMXL1	Q9Y485	3027 aa		-0.06	□□□□□ -2.42
CCNL1-223	ENST00000481173	RGPD2	P0DJD1	1756 aa		-0.06	□□□□□ -2.42
CCNL1-223	ENST00000481173	ADAMTS12	P58397	1594 aa		-0.06	□□□□□ -2.42
CCNL1-223	ENST00000481173	THOC2	Q8NI27	1593 aa	Known RBP	-0.06	□□□□□ -2.42
CCNL1-223	ENST00000481173	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	-0.06	□□□□□ -2.42
CCNL1-223	ENST00000481173	NBEA	Q8NFP9	2946 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	SUPT6H	Q7KZ85	1726 aa	Known RBP	-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	VPS13D	Q5THJ4	4388 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	PKD1	P98161	4303 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	ETDC	A0A1B0GVM5	59 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	IAPP	P10997	89 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	KCNQ1DN	Q9H478	68 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	SMCO4	Q9NRQ5	59 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	GNG13	Q9P2W3	67 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	DEPDC5	O75140	1603 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	HERC1	Q15751	4861 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	FAT3	Q8TDW7	4589 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	DIP2B	Q9P265	1576 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	MYH4	Q9Y623	1939 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	MUC12	Q9UKN1	5478 aa		-0.07	□□□□□ -2.42
CCNL1-223	ENST00000481173	ITPR3	Q14573	2671 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	DNAH6	Q9C0G6	4158 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	PIK3C2B	O00750	1634 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	RGPD4	Q7Z3J3	1758 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173		H0YAA0	97 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	DEFB130B	P0DP73	79 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	DEFB130A	P0DP74	79 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	ENHO	Q6UWT2	76 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	FASN	P49327	2511 aa	Known RBP	-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	TNRC6C	Q9HCJ0	1690 aa	Known RBP	-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	SPG11	Q96JI7	2443 aa		-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	FLG	P20930	4061 aa	Predicted RBP	-0.08	□□□□□ -2.42
CCNL1-223	ENST00000481173	RGPD3	A6NKT7	1758 aa	Predicted RBP	-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	RGPD1	P0DJD0	1748 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	PLXNC1	O60486	1568 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	CFAP74	Q9C0B2	1584 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	SPRR2E	P22531	72 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	KRTAP6-2	Q3LI66	62 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	KRTAP19-7	Q3SYF9	63 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	MINOS1	Q5TGZ0	78 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	DEFB106A	Q8N104	65 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	MTOR	P42345	2549 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	AKAP9	Q99996	3911 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	MAP3K1	Q13233	1512 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	PPL	O60437	1756 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	TMEM131L	A2VDJ0	1609 aa		-0.09	□□□□□ -2.42
CCNL1-223	ENST00000481173	SVEP1	Q4LDE5	3571 aa		-0.1	□□□□□ -2.42
CCNL1-223	ENST00000481173	ANKRD36	A6QL64	1941 aa		-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	SON	P18583	2426 aa	Known RBP	-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173		H3BUA1	57 aa		-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	CRIP1	P50238	77 aa		-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	DEFB114	Q30KQ6	69 aa		-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	GCN1	Q92616	2671 aa	Known RBP	-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	LMTK2	Q8IWU2	1503 aa		-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	PCLO	Q9Y6V0	5065 aa		-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	NES	P48681	1621 aa		-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	POLR1A	O95602	1720 aa	Predicted RBP	-0.1	□□□□□ -2.43
CCNL1-223	ENST00000481173	WIZ	O95785	1651 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	TEP1	Q99973	2627 aa	Known RBP	-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	DNAH11	Q96DT5	4516 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	LTN1	O94822	1766 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	FAT1	Q14517	4588 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	DUOX2	Q9NRD8	1548 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	SERF2	P84101	59 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	WT1-AS	Q06250	92 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	TIAM2	Q8IVF5	1701 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	LAMA5	O15230	3695 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	LAMA1	P25391	3075 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	NBAS	A2RRP1	2371 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	PKD1L2	Q7Z442	2459 aa		-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	RANBP2	P49792	3224 aa	Known RBP	-0.11	□□□□□ -2.43
CCNL1-223	ENST00000481173	TRIO	O75962	3097 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	MGAM2	Q2M2H8	2515 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	LRRK2	Q5S007	2527 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	KIAA0586	Q9BVV6	1533 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	FRY	Q5TBA9	3013 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	UBR1	Q8IWV7	1749 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173		K7EMI3	77 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	MT1A	P04731	61 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	FCER1G	P30273	86 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	NCBP2-AS2	Q69YL0	99 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	NOP10	Q9NPE3	64 aa	Known RBP	-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	C6orf48	Q9UBA6	75 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173		S4R3F8	94 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	CD163L1	Q9NR16	1453 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	ANKHD1	Q8IWZ3	2542 aa	Known RBP	-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	ARFGEF2	Q9Y6D5	1785 aa		-0.12	□□□□□ -2.43
CCNL1-223	ENST00000481173	NBPF19	A0A087WUL8	3843 aa		-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	APOB	P04114	4563 aa	Known RBP	-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	USP9Y	O00507	2555 aa	Predicted RBP	-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	CEP290	O15078	2479 aa		-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	STARD9	Q9P2P6	4700 aa		-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	DNAH3	Q8TD57	4116 aa		-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	KRTAP19-8	Q3LI54	63 aa		-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	HILPDA	Q9Y5L2	63 aa		-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	C4A	P0C0L4	1744 aa		-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	C4B	P0C0L5	1744 aa		-0.13	□□□□□ -2.43
CCNL1-223	ENST00000481173	DOT1L	Q8TEK3	1739 aa		-0.13	□□□□□ -2.43

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms