RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 PSMB2P49721 201 aa11.65□□□□□ -0.54
CTSA-206ENST00000480961 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.65□□□□□ -0.54
CTSA-206ENST00000480961 SPINK1P00995 79 aa11.64□□□□□ -0.55
CTSA-206ENST00000480961 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
CTSA-206ENST00000480961 A0A0G2JQZ4 141 aa11.63□□□□□ -0.55
CTSA-206ENST00000480961 TSTD3H0UI37 97 aa11.62□□□□□ -0.55
CTSA-206ENST00000480961 CLEC2BQ92478 149 aa11.62□□□□□ -0.55
CTSA-206ENST00000480961 M0R143 59 aa11.59□□□□□ -0.55
CTSA-206ENST00000480961 SNCGO76070 127 aa11.59□□□□□ -0.55
CTSA-206ENST00000480961 F8WEM9 126 aa11.56□□□□□ -0.56
CTSA-206ENST00000480961 SNHG12Q9BXW3 62 aa11.56□□□□□ -0.56
CTSA-206ENST00000480961 COX6CP09669 75 aa11.54□□□□□ -0.56
CTSA-206ENST00000480961 IGLV7-46A0A075B6I9 117 aa11.53□□□□□ -0.56
CTSA-206ENST00000480961 A0A1B0GX51 115 aa11.53□□□□□ -0.56
CTSA-206ENST00000480961 SCGB1C2P0DMR2 95 aa11.53□□□□□ -0.56
CTSA-206ENST00000480961 BATFQ16520 125 aa11.53□□□□□ -0.56
CTSA-206ENST00000480961 RPS29P62273 56 aaKnown RBP11.52□□□□□ -0.57
CTSA-206ENST00000480961 OCIAD2Q56VL3 154 aa11.52□□□□□ -0.57
CTSA-206ENST00000480961 PPDPFLQ8WWR9 84 aa11.52□□□□□ -0.57
CTSA-206ENST00000480961 NAA38Q9BRA0 125 aaKnown RBP11.52□□□□□ -0.57
CTSA-206ENST00000480961 H3BUT2 72 aa11.5□□□□□ -0.57
CTSA-206ENST00000480961 FABP2P12104 132 aa11.5□□□□□ -0.57
CTSA-206ENST00000480961 CD164Q04900 197 aa11.48□□□□□ -0.57
CTSA-206ENST00000480961 RNF213Q63HN8 5207 aa11.47□□□□□ -0.57
CTSA-206ENST00000480961 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
CTSA-206ENST00000480961 DNAL4O96015 105 aa11.47□□□□□ -0.57
CTSA-206ENST00000480961 IGFL1Q6UW32 110 aa11.47□□□□□ -0.57
CTSA-206ENST00000480961 NDUFV3P56181 108 aaKnown RBP11.46□□□□□ -0.57
CTSA-206ENST00000480961 Q6JHZ5 121 aa11.45□□□□□ -0.58
CTSA-206ENST00000480961 FP248Q71RG6 208 aaPredicted RBP11.45□□□□□ -0.58
CTSA-206ENST00000480961 LIMD2Q9BT23 127 aa11.45□□□□□ -0.58
CTSA-206ENST00000480961 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
CTSA-206ENST00000480961 LST1O00453 97 aa11.42□□□□□ -0.58
CTSA-206ENST00000480961 A0A1B0GV72 72 aa11.41□□□□□ -0.58
CTSA-206ENST00000480961 GHRHP01286 108 aa11.41□□□□□ -0.58
CTSA-206ENST00000480961 H3BMG7 143 aa11.4□□□□□ -0.58
CTSA-206ENST00000480961 TRACP01848 142 aa11.39□□□□□ -0.59
CTSA-206ENST00000480961 TPRXLQ17RH7 258 aa11.38□□□□□ -0.59
CTSA-206ENST00000480961 TCL1BO95988 128 aa11.37□□□□□ -0.59
CTSA-206ENST00000480961 CDIP1Q9H305 208 aa11.37□□□□□ -0.59
CTSA-206ENST00000480961 TRBV7-7A0A0K0K1E9 115 aa11.35□□□□□ -0.59
CTSA-206ENST00000480961 TMEM256-PLSCR3K7ERE1 68 aa11.35□□□□□ -0.59
CTSA-206ENST00000480961 Q5XG85 94 aa11.35□□□□□ -0.59
CTSA-206ENST00000480961 KRTAP13-3Q3SY46 172 aa11.34□□□□□ -0.59
CTSA-206ENST00000480961 H3BQ85 93 aa11.33□□□□□ -0.6
CTSA-206ENST00000480961 ATXN8Q156A1 80 aa11.33□□□□□ -0.6
CTSA-206ENST00000480961 C1orf195Q5TG92 126 aa11.33□□□□□ -0.6
CTSA-206ENST00000480961 TAX1BP3O14907 124 aa11.32□□□□□ -0.6
CTSA-206ENST00000480961 MUC17Q685J3 4493 aa11.31□□□□□ -0.6
CTSA-206ENST00000480961 BAALC-AS2P0C853 105 aa11.31□□□□□ -0.6
CTSA-206ENST00000480961 C9orf118A6NHY6 69 aa11.29□□□□□ -0.6
CTSA-206ENST00000480961 UBE2V1Q13404 147 aa11.29□□□□□ -0.6
CTSA-206ENST00000480961 ANKRD29Q8N6D5 301 aa11.28□□□□□ -0.6
CTSA-206ENST00000480961 A0A1W2PNM2 257 aa11.26□□□□□ -0.61
CTSA-206ENST00000480961 TEN1Q86WV5 123 aa11.26□□□□□ -0.61
CTSA-206ENST00000480961 PCP4L1A6NKN8 68 aa11.25□□□□□ -0.61
CTSA-206ENST00000480961 LYRM7Q5U5X0 104 aa11.25□□□□□ -0.61
CTSA-206ENST00000480961 Q6Q795 121 aa11.25□□□□□ -0.61
CTSA-206ENST00000480961 A0A087WSZ3 146 aa11.23□□□□□ -0.61
CTSA-206ENST00000480961 A0A1W2PPM0 123 aa11.23□□□□□ -0.61
CTSA-206ENST00000480961 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
CTSA-206ENST00000480961 TRBV20-1A0A075B6N2 111 aa11.22□□□□□ -0.61
CTSA-206ENST00000480961 ASB16-AS1Q495Z4 193 aa11.22□□□□□ -0.61
CTSA-206ENST00000480961 MUC2Q02817 5179 aa11.22□□□□□ -0.61
CTSA-206ENST00000480961 C9JAW5 83 aa11.2□□□□□ -0.62
CTSA-206ENST00000480961 RBM3P98179 157 aaKnown RBP11.19□□□□□ -0.62
CTSA-206ENST00000480961 CCKP06307 115 aa11.17□□□□□ -0.62
CTSA-206ENST00000480961 COL5A1-AS1Q5SY13 56 aa11.17□□□□□ -0.62
CTSA-206ENST00000480961 XP32Q5T750 250 aa11.17□□□□□ -0.62
CTSA-206ENST00000480961 TRBV7-4A0A0J9YYF1 115 aa11.16□□□□□ -0.62
CTSA-206ENST00000480961 DSCR8Q96T75 97 aa11.16□□□□□ -0.62
CTSA-206ENST00000480961 VPS25Q9BRG1 176 aa11.16□□□□□ -0.62
CTSA-206ENST00000480961 SS18L2Q9UHA2 77 aa11.16□□□□□ -0.62
CTSA-206ENST00000480961 MTURNQ8N3F0 131 aa11.14□□□□□ -0.63
CTSA-206ENST00000480961 SPCS1Q9Y6A9 102 aa11.11□□□□□ -0.63
CTSA-206ENST00000480961 Q96NJ1 140 aa11.09□□□□□ -0.63
CTSA-206ENST00000480961 JMJD7-PLA2G4BH0Y9G9 81 aa11.08□□□□□ -0.64
CTSA-206ENST00000480961 C14orf132Q9NPU4 83 aa11.06□□□□□ -0.64
CTSA-206ENST00000480961 DEFB116Q30KQ4 102 aa11.05□□□□□ -0.64
CTSA-206ENST00000480961 SEC61BP60468 96 aaKnown RBP11.04□□□□□ -0.64
CTSA-206ENST00000480961 Q6ZQT0 140 aa11.04□□□□□ -0.64
CTSA-206ENST00000480961 H3BT86 120 aa11.03□□□□□ -0.64
CTSA-206ENST00000480961 OBSCN-AS1Q96MR7 158 aa11.03□□□□□ -0.64
CTSA-206ENST00000480961 LOC110117498A0A087WWA1 95 aa11.02□□□□□ -0.65
CTSA-206ENST00000480961 SIGMAR1Q99720 223 aa11.02□□□□□ -0.65
CTSA-206ENST00000480961 IGKV4-1P06312 121 aa11□□□□□ -0.65
CTSA-206ENST00000480961 LINC00472Q9H8W2 130 aa11□□□□□ -0.65
CTSA-206ENST00000480961 K7EP34 96 aa10.98□□□□□ -0.65
CTSA-206ENST00000480961 PDE6GP18545 87 aa10.97□□□□□ -0.65
CTSA-206ENST00000480961 SMCPP49901 116 aaPredicted RBP10.97□□□□□ -0.65
CTSA-206ENST00000480961 PCOTHQ58A44 107 aa10.97□□□□□ -0.65
CTSA-206ENST00000480961 KRTAP4-1Q9BYQ7 146 aa10.97□□□□□ -0.65
CTSA-206ENST00000480961 DSCR10P59022 87 aa10.94□□□□□ -0.66
CTSA-206ENST00000480961 FAT4Q6V0I7 4981 aa10.93□□□□□ -0.66
CTSA-206ENST00000480961 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
CTSA-206ENST00000480961 PRO0461Q9UI25 63 aa10.92□□□□□ -0.66
CTSA-206ENST00000480961 C21orf62-AS1Q17RA5 79 aa10.9□□□□□ -0.66
CTSA-206ENST00000480961 IGHV6-1A0A0B4J1U7 121 aa10.87□□□□□ -0.67
CTSA-206ENST00000480961 GTF2H5Q6ZYL4 71 aa10.87□□□□□ -0.67
CTSA-206ENST00000480961 NOTCH2NLQ7Z3S9 236 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms