RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 TRIAP1O43715 76 aa9.06□□□□□ -0.96
HDLBP-238ENST00000479894 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
HDLBP-238ENST00000479894 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-238ENST00000479894 PPDPFLQ8WWR9 84 aa9.06□□□□□ -0.96
HDLBP-238ENST00000479894 DNAL4O96015 105 aa9.04□□□□□ -0.96
HDLBP-238ENST00000479894 SPRR1BP22528 89 aa9.04□□□□□ -0.96
HDLBP-238ENST00000479894 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
HDLBP-238ENST00000479894 IGLV5-48A0A075B6I7 105 aa9.02□□□□□ -0.97
HDLBP-238ENST00000479894 Q6ZQY7 126 aa9.01□□□□□ -0.97
HDLBP-238ENST00000479894 ST20-AS1Q8NBB2 130 aa9.01□□□□□ -0.97
HDLBP-238ENST00000479894 DEFB105AQ8NG35 78 aa9.01□□□□□ -0.97
HDLBP-238ENST00000479894 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
HDLBP-238ENST00000479894 PCP4L1A6NKN8 68 aa9□□□□□ -0.97
HDLBP-238ENST00000479894 COL5A1-AS1Q5SY13 56 aa9□□□□□ -0.97
HDLBP-238ENST00000479894 F8WEM9 126 aa8.99□□□□□ -0.97
HDLBP-238ENST00000479894 TRBV20-1A0A075B6N2 111 aa8.98□□□□□ -0.97
HDLBP-238ENST00000479894 A0A087X002 238 aa8.98□□□□□ -0.97
HDLBP-238ENST00000479894 TRACP01848 142 aa8.98□□□□□ -0.97
HDLBP-238ENST00000479894 SSBP3-AS1Q7Z2R9 100 aa8.98□□□□□ -0.97
HDLBP-238ENST00000479894 ANAPC11Q9NYG5 84 aa8.98□□□□□ -0.97
HDLBP-238ENST00000479894 C9orf118A6NHY6 69 aa8.97□□□□□ -0.97
HDLBP-238ENST00000479894 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
HDLBP-238ENST00000479894 SNHG12Q9BXW3 62 aa8.97□□□□□ -0.97
HDLBP-238ENST00000479894 IGLV7-46A0A075B6I9 117 aa8.96□□□□□ -0.98
HDLBP-238ENST00000479894 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
HDLBP-238ENST00000479894 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.98
HDLBP-238ENST00000479894 CLEC2BQ92478 149 aa8.96□□□□□ -0.98
HDLBP-238ENST00000479894 LST1O00453 97 aa8.95□□□□□ -0.98
HDLBP-238ENST00000479894 SPAG11AQ6PDA7 123 aa8.95□□□□□ -0.98
HDLBP-238ENST00000479894 FAM218AQ96MZ4 157 aa8.95□□□□□ -0.98
HDLBP-238ENST00000479894 ORMDL1Q9P0S3 153 aa8.95□□□□□ -0.98
HDLBP-238ENST00000479894 IGLV9-49A0A0B4J1Y8 123 aa8.94□□□□□ -0.98
HDLBP-238ENST00000479894 H3BUT2 72 aa8.94□□□□□ -0.98
HDLBP-238ENST00000479894 FABP2P12104 132 aa8.94□□□□□ -0.98
HDLBP-238ENST00000479894 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
HDLBP-238ENST00000479894 Q8N377 158 aa8.94□□□□□ -0.98
HDLBP-238ENST00000479894 Q8NBF4 154 aa8.94□□□□□ -0.98
HDLBP-238ENST00000479894 TMEM256-PLSCR3K7ERE1 68 aa8.93□□□□□ -0.98
HDLBP-238ENST00000479894 TAX1BP3O14907 124 aa8.92□□□□□ -0.98
HDLBP-238ENST00000479894 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
HDLBP-238ENST00000479894 MOBPQ13875 183 aa8.91□□□□□ -0.98
HDLBP-238ENST00000479894 A0A1W2PPM0 123 aa8.9□□□□□ -0.98
HDLBP-238ENST00000479894 Q6JHZ5 121 aa8.9□□□□□ -0.98
HDLBP-238ENST00000479894 C3orf22Q8N5N4 141 aa8.9□□□□□ -0.98
HDLBP-238ENST00000479894 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
HDLBP-238ENST00000479894 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
HDLBP-238ENST00000479894 NAA38Q9BRA0 125 aaKnown RBP8.89□□□□□ -0.99
HDLBP-238ENST00000479894 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
HDLBP-238ENST00000479894 TCL1BO95988 128 aa8.87□□□□□ -0.99
HDLBP-238ENST00000479894 SPINK1P00995 79 aa8.87□□□□□ -0.99
HDLBP-238ENST00000479894 NDUFV3P56181 108 aaKnown RBP8.87□□□□□ -0.99
HDLBP-238ENST00000479894 UBE2V1Q13404 147 aa8.87□□□□□ -0.99
HDLBP-238ENST00000479894 IGLV8-61A0A075B6I0 122 aa8.85□□□□□ -0.99
HDLBP-238ENST00000479894 CD164Q04900 197 aa8.85□□□□□ -0.99
HDLBP-238ENST00000479894 KRTAP9-7A8MTY7 169 aa8.84□□□□□ -0.99
HDLBP-238ENST00000479894 BAALC-AS2P0C853 105 aa8.84□□□□□ -0.99
HDLBP-238ENST00000479894 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
HDLBP-238ENST00000479894 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
HDLBP-238ENST00000479894 H3BMG7 143 aa8.82□□□□□ -1
HDLBP-238ENST00000479894 SPCS1Q9Y6A9 102 aa8.82□□□□□ -1
HDLBP-238ENST00000479894 ANKRD29Q8N6D5 301 aa8.81□□□□□ -1
HDLBP-238ENST00000479894 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
HDLBP-238ENST00000479894 GTF2H5Q6ZYL4 71 aa8.8□□□□□ -1
HDLBP-238ENST00000479894 FP248Q71RG6 208 aaPredicted RBP8.8□□□□□ -1
HDLBP-238ENST00000479894 LIMD2Q9BT23 127 aa8.8□□□□□ -1
HDLBP-238ENST00000479894 C9JAW5 83 aa8.79□□□□□ -1
HDLBP-238ENST00000479894 JMJD7-PLA2G4BH0Y9G9 81 aa8.79□□□□□ -1
HDLBP-238ENST00000479894 C21orf62-AS1Q17RA5 79 aa8.78□□□□□ -1
HDLBP-238ENST00000479894 H3BT86 120 aa8.77□□□□□ -1.01
HDLBP-238ENST00000479894 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
HDLBP-238ENST00000479894 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
HDLBP-238ENST00000479894 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
HDLBP-238ENST00000479894 DSCR8Q96T75 97 aa8.76□□□□□ -1.01
HDLBP-238ENST00000479894 K7EP34 96 aa8.75□□□□□ -1.01
HDLBP-238ENST00000479894 PDE6GP18545 87 aa8.75□□□□□ -1.01
HDLBP-238ENST00000479894 IGFL1Q6UW32 110 aa8.75□□□□□ -1.01
HDLBP-238ENST00000479894 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.74□□□□□ -1.01
HDLBP-238ENST00000479894 TEN1Q86WV5 123 aa8.74□□□□□ -1.01
HDLBP-238ENST00000479894 Q6Q795 121 aa8.73□□□□□ -1.01
HDLBP-238ENST00000479894 MT1HP80294 61 aa8.72□□□□□ -1.01
HDLBP-238ENST00000479894 Q5XG85 94 aa8.72□□□□□ -1.01
HDLBP-238ENST00000479894 HRCT1Q6UXD1 115 aa8.71□□□□□ -1.02
HDLBP-238ENST00000479894 SS18L2Q9UHA2 77 aa8.71□□□□□ -1.02
HDLBP-238ENST00000479894 LORP23490 312 aaPredicted RBP8.7□□□□□ -1.02
HDLBP-238ENST00000479894 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
HDLBP-238ENST00000479894 TRBV7-4A0A0J9YYF1 115 aa8.68□□□□□ -1.02
HDLBP-238ENST00000479894 A0A1B0GW54 56 aa8.68□□□□□ -1.02
HDLBP-238ENST00000479894 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
HDLBP-238ENST00000479894 F8W1H4 67 aa8.67□□□□□ -1.02
HDLBP-238ENST00000479894 CCKP06307 115 aa8.67□□□□□ -1.02
HDLBP-238ENST00000479894 LOC110117498A0A087WWA1 95 aa8.65□□□□□ -1.02
HDLBP-238ENST00000479894 A0A1B0GV72 72 aa8.65□□□□□ -1.02
HDLBP-238ENST00000479894 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
HDLBP-238ENST00000479894 OBSCN-AS1Q96MR7 158 aa8.65□□□□□ -1.02
HDLBP-238ENST00000479894 A0A0G2JQZ4 141 aa8.64□□□□□ -1.03
HDLBP-238ENST00000479894 A0A1W2PNM2 257 aa8.61□□□□□ -1.03
HDLBP-238ENST00000479894 MTURNQ8N3F0 131 aa8.61□□□□□ -1.03
HDLBP-238ENST00000479894 VPS25Q9BRG1 176 aa8.61□□□□□ -1.03
HDLBP-238ENST00000479894 A0A087WSZ3 146 aa8.6□□□□□ -1.03
HDLBP-238ENST00000479894 XP32Q5T750 250 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms