RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 NOTCH1P46531 2555 aa13.14□□□□□ -0.31
COL13A1-208ENST00000479733 A8MUN3 132 aa13.13□□□□□ -0.31
COL13A1-208ENST00000479733 IGLV5-37A0A075B6J1 123 aa13.12□□□□□ -0.31
COL13A1-208ENST00000479733 MP68P56378 58 aa13.12□□□□□ -0.31
COL13A1-208ENST00000479733 DNAH10OSP0CZ25 163 aa13.12□□□□□ -0.31
COL13A1-208ENST00000479733 IGKV2-24A0A0C4DH68 120 aa13.1□□□□□ -0.31
COL13A1-208ENST00000479733 CYP4F30PQ9H0H9 118 aa13.1□□□□□ -0.31
COL13A1-208ENST00000479733 PRR15Q8IV56 129 aa13.09□□□□□ -0.31
COL13A1-208ENST00000479733 A8MU10 97 aa13.08□□□□□ -0.32
COL13A1-208ENST00000479733 LINC00588Q9Y4M8 146 aa13.08□□□□□ -0.32
COL13A1-208ENST00000479733 SEC61GP60059 68 aa13.07□□□□□ -0.32
COL13A1-208ENST00000479733 FBN1P35555 2871 aaKnown RBP13.07□□□□□ -0.32
COL13A1-208ENST00000479733 NDUFB1O75438 58 aa13.06□□□□□ -0.32
COL13A1-208ENST00000479733 STAB1Q9NY15 2570 aa13.06□□□□□ -0.32
COL13A1-208ENST00000479733 B9D2Q9BPU9 175 aa13.06□□□□□ -0.32
COL13A1-208ENST00000479733 COL6A5A8TX70 2615 aa13.03□□□□□ -0.32
COL13A1-208ENST00000479733 H0Y9P7 68 aa13.02□□□□□ -0.33
COL13A1-208ENST00000479733 PMAIP1Q13794 54 aa13.02□□□□□ -0.33
COL13A1-208ENST00000479733 A0A096LNI7 61 aa13.01□□□□□ -0.33
COL13A1-208ENST00000479733 CSMD3Q7Z407 3707 aa13□□□□□ -0.33
COL13A1-208ENST00000479733 UBE2AP49459 152 aa13□□□□□ -0.33
COL13A1-208ENST00000479733 CASC2Q6XLA1 102 aa13□□□□□ -0.33
COL13A1-208ENST00000479733 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
COL13A1-208ENST00000479733 Q5VV11 94 aa12.95□□□□□ -0.34
COL13A1-208ENST00000479733 NBEAL1Q6ZS30 2694 aa12.95□□□□□ -0.34
COL13A1-208ENST00000479733 CHKB-CPT1BH3BT56 60 aa12.94□□□□□ -0.34
COL13A1-208ENST00000479733 CNBPP62633 177 aaKnown RBP12.94□□□□□ -0.34
COL13A1-208ENST00000479733 H0Y9J4 135 aa12.91□□□□□ -0.34
COL13A1-208ENST00000479733 PRR15LQ9BU68 103 aa12.91□□□□□ -0.34
COL13A1-208ENST00000479733 Q8N9P0 234 aaPredicted RBP12.9□□□□□ -0.34
COL13A1-208ENST00000479733 KRTAP11-1Q8IUC1 163 aa12.89□□□□□ -0.35
COL13A1-208ENST00000479733 DNAH10Q8IVF4 4471 aa12.89□□□□□ -0.35
COL13A1-208ENST00000479733 IGLV8-61A0A075B6I0 122 aa12.89□□□□□ -0.35
COL13A1-208ENST00000479733 CHTF8P0CG12 524 aa12.88□□□□□ -0.35
COL13A1-208ENST00000479733 PHF5AQ7RTV0 110 aaKnown RBP12.87□□□□□ -0.35
COL13A1-208ENST00000479733 A8MWP4 228 aa12.86□□□□□ -0.35
COL13A1-208ENST00000479733 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
COL13A1-208ENST00000479733 SPANXA2-OT1Q8N9U9 137 aa12.85□□□□□ -0.35
COL13A1-208ENST00000479733 SPTSSBQ8NFR3 76 aa12.85□□□□□ -0.35
COL13A1-208ENST00000479733 C16orf90A8MZG2 172 aa12.84□□□□□ -0.35
COL13A1-208ENST00000479733 PCOTHQ58A44 107 aa12.84□□□□□ -0.35
COL13A1-208ENST00000479733 LINC00472Q9H8W2 130 aa12.83□□□□□ -0.36
COL13A1-208ENST00000479733 DNAH1Q9P2D7 4330 aa12.83□□□□□ -0.36
COL13A1-208ENST00000479733 LYSTQ99698 3801 aa12.82□□□□□ -0.36
COL13A1-208ENST00000479733 LIMD2Q9BT23 127 aa12.81□□□□□ -0.36
COL13A1-208ENST00000479733 C9orf163Q8N9P6 203 aa12.8□□□□□ -0.36
COL13A1-208ENST00000479733 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
COL13A1-208ENST00000479733 H3BPC8 53 aa12.79□□□□□ -0.36
COL13A1-208ENST00000479733 COA5Q86WW8 74 aa12.79□□□□□ -0.36
COL13A1-208ENST00000479733 A6NED7 52 aa12.75□□□□□ -0.37
COL13A1-208ENST00000479733 MMP24-AS1A0A0U1RRL7 71 aa12.75□□□□□ -0.37
COL13A1-208ENST00000479733 TENM2Q9NT68 2774 aa12.75□□□□□ -0.37
COL13A1-208ENST00000479733 LCA10Q71F78 164 aa12.72□□□□□ -0.37
COL13A1-208ENST00000479733 STAB2Q8WWQ8 2551 aa12.71□□□□□ -0.37
COL13A1-208ENST00000479733 IGLV9-49A0A0B4J1Y8 123 aa12.7□□□□□ -0.38
COL13A1-208ENST00000479733 SPAG11AQ6PDA7 123 aa12.69□□□□□ -0.38
COL13A1-208ENST00000479733 IGLV7-46A0A075B6I9 117 aa12.68□□□□□ -0.38
COL13A1-208ENST00000479733 NDUFS5O43920 106 aa12.68□□□□□ -0.38
COL13A1-208ENST00000479733 CMYA5Q8N3K9 4069 aa12.68□□□□□ -0.38
COL13A1-208ENST00000479733 SPRR1BP22528 89 aa12.68□□□□□ -0.38
COL13A1-208ENST00000479733 CD164Q04900 197 aa12.68□□□□□ -0.38
COL13A1-208ENST00000479733 KRTAP24-1Q3LI83 254 aa12.66□□□□□ -0.38
COL13A1-208ENST00000479733 Q75L30 129 aa12.64□□□□□ -0.39
COL13A1-208ENST00000479733 DNAH9Q9NYC9 4486 aa12.63□□□□□ -0.39
COL13A1-208ENST00000479733 IGHV6-1A0A0B4J1U7 121 aa12.61□□□□□ -0.39
COL13A1-208ENST00000479733 UBE2DNLQ8IWF7 75 aa12.61□□□□□ -0.39
COL13A1-208ENST00000479733 MGAM2Q2M2H8 2515 aa12.61□□□□□ -0.39
COL13A1-208ENST00000479733 PANO1I0J062 215 aa12.6□□□□□ -0.39
COL13A1-208ENST00000479733 LOC101927531A0A1B0GV80 90 aa12.6□□□□□ -0.39
COL13A1-208ENST00000479733 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.4
COL13A1-208ENST00000479733 Q96NJ1 140 aa12.58□□□□□ -0.4
COL13A1-208ENST00000479733 ATP11AUNQ6ZP68 121 aa12.57□□□□□ -0.4
COL13A1-208ENST00000479733 KTN1-AS1Q86SY8 53 aa12.57□□□□□ -0.4
COL13A1-208ENST00000479733 C8orf17Q9NRJ1 99 aa12.56□□□□□ -0.4
COL13A1-208ENST00000479733 TP53AIP1Q9HCN2 124 aa12.53□□□□□ -0.4
COL13A1-208ENST00000479733 MOBPQ13875 183 aa12.52□□□□□ -0.4
COL13A1-208ENST00000479733 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
COL13A1-208ENST00000479733 K7EIL1 84 aa12.51□□□□□ -0.41
COL13A1-208ENST00000479733 HRES1P13985 223 aa12.51□□□□□ -0.41
COL13A1-208ENST00000479733 ANAPC11Q9NYG5 84 aa12.51□□□□□ -0.41
COL13A1-208ENST00000479733 A0A087X002 238 aa12.5□□□□□ -0.41
COL13A1-208ENST00000479733 NOTCH2NLQ7Z3S9 236 aa12.5□□□□□ -0.41
COL13A1-208ENST00000479733 CDC42SE1Q9NRR8 79 aa12.5□□□□□ -0.41
COL13A1-208ENST00000479733 SPINK7P58062 85 aa12.49□□□□□ -0.41
COL13A1-208ENST00000479733 C14orf177Q52M58 125 aa12.49□□□□□ -0.41
COL13A1-208ENST00000479733 LINC01558Q9Y6Z2 57 aa12.49□□□□□ -0.41
COL13A1-208ENST00000479733 CDK2AP2O75956 126 aa12.48□□□□□ -0.41
COL13A1-208ENST00000479733 RBM12B-AS1Q9P1G2 102 aa12.48□□□□□ -0.41
COL13A1-208ENST00000479733 ASB16-AS1Q495Z4 193 aa12.48□□□□□ -0.41
COL13A1-208ENST00000479733 Q6ZR54 194 aa12.48□□□□□ -0.41
COL13A1-208ENST00000479733 A6NN06 94 aa12.47□□□□□ -0.41
COL13A1-208ENST00000479733 KRTAP13-1Q8IUC0 172 aa12.47□□□□□ -0.41
COL13A1-208ENST00000479733 A0A1B0GVX0 72 aa12.46□□□□□ -0.41
COL13A1-208ENST00000479733 DNAH7Q8WXX0 4024 aa12.44□□□□□ -0.42
COL13A1-208ENST00000479733 MRPL34Q9BQ48 92 aaKnown RBP12.43□□□□□ -0.42
COL13A1-208ENST00000479733 PRR26Q8N8Z3 221 aa12.42□□□□□ -0.42
COL13A1-208ENST00000479733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.42□□□□□ -0.42
COL13A1-208ENST00000479733 SPINK6Q6UWN8 80 aa12.41□□□□□ -0.42
COL13A1-208ENST00000479733 PLAC8Q9NZF1 115 aa12.4□□□□□ -0.42
COL13A1-208ENST00000479733 APLNQ9ULZ1 77 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms