RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 UGGT2Q9NYU1 1516 aa-0.05□□□□□ -2.42
VLDLR-204ENST00000478776 RALGAPBQ86X10 1494 aa-0.05□□□□□ -2.42
VLDLR-204ENST00000478776 HFM1A2PYH4 1435 aa-0.05□□□□□ -2.42
VLDLR-204ENST00000478776 PCNX1Q96RV3 2341 aa-0.05□□□□□ -2.42
VLDLR-204ENST00000478776 RNF17Q9BXT8 1623 aaKnown RBP-0.05□□□□□ -2.42
VLDLR-204ENST00000478776 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
VLDLR-204ENST00000478776 DEFB131BA0A096LNP1 70 aa-0.06□□□□□ -2.42
VLDLR-204ENST00000478776 H0YAA0 97 aa-0.06□□□□□ -2.42
VLDLR-204ENST00000478776 AKAP13Q12802 2813 aa-0.06□□□□□ -2.42
VLDLR-204ENST00000478776 LRP1BQ9NZR2 4599 aa-0.07□□□□□ -2.42
VLDLR-204ENST00000478776 H0YGG7 62 aa-0.07□□□□□ -2.42
VLDLR-204ENST00000478776 KCNQ1DNQ9H478 68 aa-0.07□□□□□ -2.42
VLDLR-204ENST00000478776 SMCO4Q9NRQ5 59 aa-0.07□□□□□ -2.42
VLDLR-204ENST00000478776 PDE4DIPQ5VU43 2346 aa-0.08□□□□□ -2.42
VLDLR-204ENST00000478776 LYNX1G3V0Z9 82 aa-0.08□□□□□ -2.42
VLDLR-204ENST00000478776 MRPL33O75394 65 aaKnown RBP-0.08□□□□□ -2.42
VLDLR-204ENST00000478776 CDC42BPGQ6DT37 1551 aa-0.08□□□□□ -2.42
VLDLR-204ENST00000478776 NRAPQ86VF7 1730 aa-0.08□□□□□ -2.42
VLDLR-204ENST00000478776 ZC3H13Q5T200 1668 aaKnown RBP-0.08□□□□□ -2.42
VLDLR-204ENST00000478776 PCLOQ9Y6V0 5065 aa-0.09□□□□□ -2.42
VLDLR-204ENST00000478776 H3BVH4 76 aa-0.09□□□□□ -2.42
VLDLR-204ENST00000478776 UBL5Q9BZL1 73 aa-0.09□□□□□ -2.42
VLDLR-204ENST00000478776 NHSQ6T4R5 1651 aa-0.09□□□□□ -2.42
VLDLR-204ENST00000478776 DUOX2Q9NRD8 1548 aa-0.09□□□□□ -2.42
VLDLR-204ENST00000478776 STAB1Q9NY15 2570 aa-0.1□□□□□ -2.43
VLDLR-204ENST00000478776 MAP1AP78559 2803 aaPredicted RBP-0.1□□□□□ -2.43
VLDLR-204ENST00000478776 PDCD5O14737 125 aa-0.1□□□□□ -2.43
VLDLR-204ENST00000478776 DEFA5Q01523 94 aa-0.1□□□□□ -2.43
VLDLR-204ENST00000478776 KMT2CQ8NEZ4 4911 aaKnown RBP-0.1□□□□□ -2.43
VLDLR-204ENST00000478776 DIP2AQ14689 1571 aa-0.11□□□□□ -2.43
VLDLR-204ENST00000478776 ABCA9Q8IUA7 1624 aa-0.11□□□□□ -2.43
VLDLR-204ENST00000478776 ENHOQ6UWT2 76 aa-0.11□□□□□ -2.43
VLDLR-204ENST00000478776 INO80Q9ULG1 1556 aaPredicted RBP-0.11□□□□□ -2.43
VLDLR-204ENST00000478776 SPRR2AP35326 72 aa-0.12□□□□□ -2.43
VLDLR-204ENST00000478776 TNRC18O15417 2968 aaPredicted RBP-0.12□□□□□ -2.43
VLDLR-204ENST00000478776 RYR3Q15413 4870 aa-0.13□□□□□ -2.43
VLDLR-204ENST00000478776 PKHD1P08F94 4074 aa-0.13□□□□□ -2.43
VLDLR-204ENST00000478776 DSPP15924 2871 aaKnown RBP-0.13□□□□□ -2.43
VLDLR-204ENST00000478776 ATXN8Q156A1 80 aa-0.13□□□□□ -2.43
VLDLR-204ENST00000478776 PKD1P98161 4303 aa-0.13□□□□□ -2.43
VLDLR-204ENST00000478776 PRRC2CQ9Y520 2896 aaKnown RBP-0.13□□□□□ -2.43
VLDLR-204ENST00000478776 ASXL1Q8IXJ9 1541 aa-0.13□□□□□ -2.43
VLDLR-204ENST00000478776 HECTD1Q9ULT8 2610 aa-0.14□□□□□ -2.43
VLDLR-204ENST00000478776 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.14□□□□□ -2.43
VLDLR-204ENST00000478776 LYSTQ99698 3801 aa-0.14□□□□□ -2.43
VLDLR-204ENST00000478776 NBASA2RRP1 2371 aa-0.14□□□□□ -2.43
VLDLR-204ENST00000478776 DEFB130BP0DP73 79 aa-0.14□□□□□ -2.43
VLDLR-204ENST00000478776 DEFB130AP0DP74 79 aa-0.14□□□□□ -2.43
VLDLR-204ENST00000478776 IAPPP10997 89 aa-0.14□□□□□ -2.43
VLDLR-204ENST00000478776 KIAA0586Q9BVV6 1533 aa-0.14□□□□□ -2.43
VLDLR-204ENST00000478776 KRTAP6-2Q3LI66 62 aa-0.15□□□□□ -2.43
VLDLR-204ENST00000478776 HILPDAQ9Y5L2 63 aa-0.15□□□□□ -2.43
VLDLR-204ENST00000478776 BPTFQ12830 3046 aa-0.15□□□□□ -2.43
VLDLR-204ENST00000478776 RNF213Q63HN8 5207 aa-0.16□□□□□ -2.43
VLDLR-204ENST00000478776 CREBBPQ92793 2442 aa-0.16□□□□□ -2.43
VLDLR-204ENST00000478776 SETD2Q9BYW2 2564 aaPredicted RBP-0.16□□□□□ -2.43
VLDLR-204ENST00000478776 FLGP20930 4061 aaPredicted RBP-0.16□□□□□ -2.43
VLDLR-204ENST00000478776 C3P01024 1663 aa-0.16□□□□□ -2.44
VLDLR-204ENST00000478776 ETDCA0A1B0GVM5 59 aa-0.16□□□□□ -2.44
VLDLR-204ENST00000478776 CRIP1P50238 77 aa-0.16□□□□□ -2.44
VLDLR-204ENST00000478776 DEFB114Q30KQ6 69 aa-0.16□□□□□ -2.44
VLDLR-204ENST00000478776 DOPEY1Q5JWR5 2465 aa-0.16□□□□□ -2.44
VLDLR-204ENST00000478776 PDZD2O15018 2839 aa-0.17□□□□□ -2.44
VLDLR-204ENST00000478776 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
VLDLR-204ENST00000478776 SVEP1Q4LDE5 3571 aa-0.17□□□□□ -2.44
VLDLR-204ENST00000478776 RYR2Q92736 4967 aa-0.18□□□□□ -2.44
VLDLR-204ENST00000478776 SPTBN4Q9H254 2564 aa-0.18□□□□□ -2.44
VLDLR-204ENST00000478776 PRLHP81277 87 aa-0.18□□□□□ -2.44
VLDLR-204ENST00000478776 UBR4Q5T4S7 5183 aa-0.18□□□□□ -2.44
VLDLR-204ENST00000478776 ITSN2Q9NZM3 1697 aa-0.18□□□□□ -2.44
VLDLR-204ENST00000478776 SRRM2Q9UQ35 2752 aaKnown RBP-0.18□□□□□ -2.44
VLDLR-204ENST00000478776 USH2AO75445 5202 aa-0.19□□□□□ -2.44
VLDLR-204ENST00000478776 STAB2Q8WWQ8 2551 aa-0.19□□□□□ -2.44
VLDLR-204ENST00000478776 NF1P21359 2839 aa-0.19□□□□□ -2.44
VLDLR-204ENST00000478776 GNG13Q9P2W3 67 aa-0.19□□□□□ -2.44
VLDLR-204ENST00000478776 NBEAL1Q6ZS30 2694 aa-0.19□□□□□ -2.44
VLDLR-204ENST00000478776 HYDINQ4G0P3 5121 aa-0.19□□□□□ -2.44
VLDLR-204ENST00000478776 RYR1P21817 5038 aa-0.2□□□□□ -2.44
VLDLR-204ENST00000478776 C9orf92A6NGG3 77 aa-0.2□□□□□ -2.44
VLDLR-204ENST00000478776 SPRR2EP22531 72 aa-0.2□□□□□ -2.44
VLDLR-204ENST00000478776 EFCAB5A4FU69 1503 aa-0.2□□□□□ -2.44
VLDLR-204ENST00000478776 DNMBPQ6XZF7 1577 aa-0.2□□□□□ -2.44
VLDLR-204ENST00000478776 MROH1Q8NDA8 1641 aa-0.2□□□□□ -2.44
VLDLR-204ENST00000478776 KIAA1109Q2LD37 5005 aa-0.21□□□□□ -2.44
VLDLR-204ENST00000478776 MADDQ8WXG6 1647 aa-0.21□□□□□ -2.44
VLDLR-204ENST00000478776 SONP18583 2426 aaKnown RBP-0.22□□□□□ -2.44
VLDLR-204ENST00000478776 EPPK1P58107 5090 aaKnown RBP-0.22□□□□□ -2.44
VLDLR-204ENST00000478776 ZZEF1O43149 2961 aa-0.22□□□□□ -2.44
VLDLR-204ENST00000478776 TGP01266 2768 aa-0.22□□□□□ -2.44
VLDLR-204ENST00000478776 ABCC6O95255 1503 aa-0.23□□□□□ -2.45
VLDLR-204ENST00000478776 ABCA13Q86UQ4 5058 aa-0.23□□□□□ -2.45
VLDLR-204ENST00000478776 ANKRD36CQ5JPF3 1778 aa-0.23□□□□□ -2.45
VLDLR-204ENST00000478776 H3BNG1 76 aa-0.23□□□□□ -2.45
VLDLR-204ENST00000478776 HIVEP1P15822 2718 aa-0.23□□□□□ -2.45
VLDLR-204ENST00000478776 KIF1AQ12756 1690 aa-0.24□□□□□ -2.45
VLDLR-204ENST00000478776 DEFB106AQ8N104 65 aa-0.24□□□□□ -2.45
VLDLR-204ENST00000478776 S4R3F8 94 aa-0.24□□□□□ -2.45
VLDLR-204ENST00000478776 VPS13BQ7Z7G8 4022 aa-0.24□□□□□ -2.45
VLDLR-204ENST00000478776 KRTAP19-7Q3SYF9 63 aa-0.25□□□□□ -2.45
VLDLR-204ENST00000478776 MINOS1Q5TGZ0 78 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms