RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 KIAA1551Q9HCM1 1747 aa-0.02□□□□□ -2.41
PDE1C-208ENST00000478736 DNAH2Q9P225 4427 aa-0.02□□□□□ -2.41
PDE1C-208ENST00000478736 FANCAO15360 1455 aa-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 UQCRHLA0A096LP55 91 aa-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 ARMS2P0C7Q2 107 aa-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 FAUP35544 74 aaKnown RBP-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 GNGT1P63211 74 aa-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 ETDBQ3ZM63 59 aa-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 COL5A1-AS1Q5SY13 56 aa-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 SMARCA2P51531 1590 aa-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 NKTRP30414 1462 aaKnown RBP-0.03□□□□□ -2.41
PDE1C-208ENST00000478736 TROQ12816 1431 aaPredicted RBP-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 ANKRD36A6QL64 1941 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 SPINK4O60575 86 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 PKIAP61925 76 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 ZNF720Q7Z2F6 126 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 DEFB105AQ8NG35 78 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 SNHG12Q9BXW3 62 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 SAMD9Q5K651 1589 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 KIAA0586Q9BVV6 1533 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 CRYBG1Q9Y4K1 1723 aa-0.04□□□□□ -2.42
PDE1C-208ENST00000478736 CCNB3Q8WWL7 1395 aa-0.05□□□□□ -2.42
PDE1C-208ENST00000478736 MYO3AQ8NEV4 1616 aa-0.05□□□□□ -2.42
PDE1C-208ENST00000478736 F8WEM9 126 aa-0.05□□□□□ -2.42
PDE1C-208ENST00000478736 HMGN3Q15651 99 aa-0.05□□□□□ -2.42
PDE1C-208ENST00000478736 KLK9Q2XQG4 91 aa-0.05□□□□□ -2.42
PDE1C-208ENST00000478736 ATP10BO94823 1461 aa-0.05□□□□□ -2.42
PDE1C-208ENST00000478736 ALKQ9UM73 1620 aa-0.05□□□□□ -2.42
PDE1C-208ENST00000478736 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.06□□□□□ -2.42
PDE1C-208ENST00000478736 LOC730098B7Z3J9 87 aa-0.06□□□□□ -2.42
PDE1C-208ENST00000478736 PSENENQ9NZ42 101 aa-0.06□□□□□ -2.42
PDE1C-208ENST00000478736 CRIPTQ9P021 101 aa-0.06□□□□□ -2.42
PDE1C-208ENST00000478736 RALGAPBQ86X10 1494 aa-0.06□□□□□ -2.42
PDE1C-208ENST00000478736 CEP162Q5TB80 1403 aa-0.06□□□□□ -2.42
PDE1C-208ENST00000478736 PKD1L3Q7Z443 1732 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 KIF20BQ96Q89 1820 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 CPSF4LA6NMK7 179 aaKnown RBP-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 D6R8Y8 96 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 I3L3M4 83 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 LEPROTL1O95214 131 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 GYPAP02724 150 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 MUSTN1Q8IVN3 82 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 HIGD1BQ9P298 99 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 APLNQ9ULZ1 77 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 TTC37Q6PGP7 1564 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 MYH4Q9Y623 1939 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 UBR1Q8IWV7 1749 aa-0.07□□□□□ -2.42
PDE1C-208ENST00000478736 NESP48681 1621 aa-0.08□□□□□ -2.42
PDE1C-208ENST00000478736 ALKAL2Q6UX46 152 aa-0.08□□□□□ -2.42
PDE1C-208ENST00000478736 UBE2D4Q9Y2X8 147 aa-0.08□□□□□ -2.42
PDE1C-208ENST00000478736 ADAMTS12P58397 1594 aa-0.08□□□□□ -2.42
PDE1C-208ENST00000478736 TJP1Q07157 1748 aa-0.08□□□□□ -2.42
PDE1C-208ENST00000478736 QSER1Q2KHR3 1735 aa-0.08□□□□□ -2.42
PDE1C-208ENST00000478736 LRRC7Q96NW7 1537 aa-0.08□□□□□ -2.42
PDE1C-208ENST00000478736 RGPD4Q7Z3J3 1758 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 UBR3Q6ZT12 1888 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 NWD1Q149M9 1564 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 SPTY2D1-AS1A0A0U1RR47 76 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 M0R2T5 61 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 IGLC2P0DOY2 106 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 IGLC3P0DOY3 106 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 MRPL34Q9BQ48 92 aaKnown RBP-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 C20orf78Q9BR46 151 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 BCORQ6W2J9 1755 aa-0.09□□□□□ -2.42
PDE1C-208ENST00000478736 CCL22O00626 93 aa-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 HMGN2P05204 90 aaKnown RBP-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 MT1BP07438 61 aa-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 SMIM11AP58511 58 aa-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 PEA15Q15121 130 aa-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 H1FX-AS1Q4G0G2 97 aa-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 KRTAP8-1Q8IUC2 63 aa-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 ABCC3O15438 1527 aa-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 RGPD3A6NKT7 1758 aaPredicted RBP-0.1□□□□□ -2.43
PDE1C-208ENST00000478736 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 WIZO95785 1651 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 EEA1Q15075 1411 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 EFCAB6Q5THR3 1501 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 TMEM131LA2VDJ0 1609 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 MAP3K4Q9Y6R4 1608 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 DEFB112Q30KQ8 113 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 NMSQ5H8A3 153 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 DEFB104AQ8WTQ1 72 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 Q9H521 79 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 ATP7BP35670 1465 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 THOC2Q8NI27 1593 aaKnown RBP-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 PREX1Q8TCU6 1659 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 RGPD2P0DJD1 1756 aa-0.11□□□□□ -2.43
PDE1C-208ENST00000478736 NEXMIFQ5QGS0 1516 aa-0.12□□□□□ -2.43
PDE1C-208ENST00000478736 CLASP1Q7Z460 1538 aa-0.12□□□□□ -2.43
PDE1C-208ENST00000478736 RGPD1P0DJD0 1748 aa-0.12□□□□□ -2.43
PDE1C-208ENST00000478736 LYNX1G3V0Z9 82 aa-0.12□□□□□ -2.43
PDE1C-208ENST00000478736 MT1HL1P0DM35 61 aa-0.12□□□□□ -2.43
PDE1C-208ENST00000478736 MT1HP80294 61 aa-0.12□□□□□ -2.43
PDE1C-208ENST00000478736 V9GYS6 101 aa-0.12□□□□□ -2.43
PDE1C-208ENST00000478736 CLIP1P30622 1438 aa-0.13□□□□□ -2.43
PDE1C-208ENST00000478736 ASXL1Q8IXJ9 1541 aa-0.13□□□□□ -2.43
PDE1C-208ENST00000478736 SUPT6HQ7KZ85 1726 aaKnown RBP-0.13□□□□□ -2.43
PDE1C-208ENST00000478736 RGPD8O14715 1765 aaPredicted RBP-0.13□□□□□ -2.43
PDE1C-208ENST00000478736 RGPD5Q99666 1765 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms