RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 PREX1Q8TCU6 1659 aa0.11□□□□□ -2.39
NECTIN3-204ENST00000478327 ITSN1Q15811 1721 aa0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 TIAM2Q8IVF5 1701 aa0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 EIF2AK4Q9P2K8 1649 aaKnown RBP0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 RPS27P42677 84 aaKnown RBP0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 RPS27LQ71UM5 84 aaKnown RBP0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 C6orf48Q9UBA6 75 aa0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 WIZO95785 1651 aa0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 PLCH1Q4KWH8 1693 aa0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 TNRC6CQ9HCJ0 1690 aaKnown RBP0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 PRXQ9BXM0 1461 aa0.1□□□□□ -2.39
NECTIN3-204ENST00000478327 SPTA1P02549 2419 aa0.09□□□□□ -2.39
NECTIN3-204ENST00000478327 ABCA6Q8N139 1617 aa0.09□□□□□ -2.39
NECTIN3-204ENST00000478327 CICQ96RK0 1608 aaPredicted RBP0.09□□□□□ -2.39
NECTIN3-204ENST00000478327 NHSQ6T4R5 1651 aa0.09□□□□□ -2.39
NECTIN3-204ENST00000478327 CFAP43Q8NDM7 1665 aa0.09□□□□□ -2.39
NECTIN3-204ENST00000478327 SERF2P84101 59 aa0.09□□□□□ -2.4
NECTIN3-204ENST00000478327 WT1-ASQ06250 92 aa0.09□□□□□ -2.4
NECTIN3-204ENST00000478327 LINC00308Q8TCZ7 52 aa0.09□□□□□ -2.4
NECTIN3-204ENST00000478327 S4R3F8 94 aa0.09□□□□□ -2.4
NECTIN3-204ENST00000478327 UGGT1Q9NYU2 1555 aa0.09□□□□□ -2.4
NECTIN3-204ENST00000478327 NESP48681 1621 aa0.09□□□□□ -2.4
NECTIN3-204ENST00000478327 NRAPQ86VF7 1730 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 PARP4Q9UKK3 1724 aaKnown RBP0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 SETXQ7Z333 2677 aaKnown RBP0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 PLXNC1O60486 1568 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 SNRPGP15A8MWD9 76 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 H0YGX0 51 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 PRLHP81277 87 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 DEFB106AQ8N104 65 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 DEPDC5O75140 1603 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 RNF17Q9BXT8 1623 aaKnown RBP0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 CCDC180Q9P1Z9 1646 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 NEBP20929 6669 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 NSD1Q96L73 2696 aaPredicted RBP0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 AGLP35573 1532 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 CLASP1Q7Z460 1538 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 ABCA10Q8WWZ4 1543 aa0.08□□□□□ -2.4
NECTIN3-204ENST00000478327 TJP1Q07157 1748 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 H0YGG7 62 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 PLNP26678 52 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 TFF3Q07654 80 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 CMC2Q9NRP2 79 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 TMEM167BQ9NRX6 74 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 TIMM8BQ9Y5J9 83 aaPredicted RBP0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 ALS2Q96Q42 1657 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 KIAA0586Q9BVV6 1533 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 C4AP0C0L4 1744 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 C4BP0C0L5 1744 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 DDX60LQ5H9U9 1706 aaKnown RBP0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 HMCN2Q8NDA2 5059 aa0.07□□□□□ -2.4
NECTIN3-204ENST00000478327 TIAM1Q13009 1591 aa0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 THOC2Q8NI27 1593 aaKnown RBP0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 KMT2AQ03164 3969 aa0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 TNXBP22105 4242 aa0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 PREX2Q70Z35 1606 aa0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 HUWE1Q7Z6Z7 4374 aaKnown RBP0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 FANCD2Q9BXW9 1451 aa0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 SPRR2BP35325 72 aa0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 KAAG1Q9UBP8 84 aa0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 CNOT1A5YKK6 2376 aaKnown RBP0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 EFCAB6Q5THR3 1501 aa0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 MAP1BP46821 2468 aaKnown RBP0.06□□□□□ -2.4
NECTIN3-204ENST00000478327 CHD8Q9HCK8 2581 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 DSTQ03001 7570 aaKnown RBP0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 FLNAP21333 2647 aaKnown RBP0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 C3P01024 1663 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 FAT2Q9NYQ8 4349 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 IGLV5-48A0A075B6I7 105 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 SMIM27A0A1W2PRY6 76 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 LINC01546A6NGU7 62 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 H3BNG1 76 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 H3BUA1 57 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 KRTAP6-2Q3LI66 62 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 WFDC10BQ8IUB3 73 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 ABRACLQ9P1F3 81 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 KNL1Q8NG31 2342 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 MAST1Q9Y2H9 1570 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 MROH2AA6NES4 1674 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 BSNQ9UPA5 3926 aa0.05□□□□□ -2.4
NECTIN3-204ENST00000478327 TRANK1O15050 2925 aa0.04□□□□□ -2.4
NECTIN3-204ENST00000478327 EP300Q09472 2414 aaPredicted RBP0.04□□□□□ -2.4
NECTIN3-204ENST00000478327 TOMM5Q8N4H5 51 aa0.04□□□□□ -2.4
NECTIN3-204ENST00000478327 SMIM2Q9BVW6 85 aa0.04□□□□□ -2.4
NECTIN3-204ENST00000478327 KIF1AQ12756 1690 aa0.04□□□□□ -2.4
NECTIN3-204ENST00000478327 ITSN2Q9NZM3 1697 aa0.04□□□□□ -2.4
NECTIN3-204ENST00000478327 SYCP2Q9BX26 1530 aa0.03□□□□□ -2.4
NECTIN3-204ENST00000478327 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.4
NECTIN3-204ENST00000478327 ADCY10Q96PN6 1610 aa0.03□□□□□ -2.4
NECTIN3-204ENST00000478327 C9orf92A6NGG3 77 aa0.03□□□□□ -2.4
NECTIN3-204ENST00000478327 LY75O60449 1722 aa0.03□□□□□ -2.4
NECTIN3-204ENST00000478327 TENM2Q9NT68 2774 aa0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 PDE4DIPQ5VU43 2346 aa0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 MAP1AP78559 2803 aaPredicted RBP0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 MYCBP2O75592 4640 aa0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 CROCC2H7BZ55 1655 aa0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 PCNX1Q96RV3 2341 aa0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 HSPG2P98160 4391 aa0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 SPRR2AP35326 72 aa0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 DEFB110Q30KQ9 67 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms