RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 SPG11Q96JI7 2443 aa1.17□□□□□ -2.22
SMNDC1-205ENST00000477763 LAMA4Q16363 1823 aa1.17□□□□□ -2.22
SMNDC1-205ENST00000477763 AKAP9Q99996 3911 aa1.17□□□□□ -2.22
SMNDC1-205ENST00000477763 ABCA2Q9BZC7 2435 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 G3V318 75 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 H0Y9P7 68 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 LY6G6CO95867 125 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 GCHFRP30047 84 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 SPINT3P49223 89 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 ATP5EP2Q5VTU8 51 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 Q6JHZ5 121 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 DEFB124Q8NES8 71 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 SPENQ96T58 3664 aaKnown RBP1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 CRYBG3Q68DQ2 2970 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 ATMQ13315 3056 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 RYR3Q15413 4870 aa1.16□□□□□ -2.22
SMNDC1-205ENST00000477763 F8P00451 2351 aa1.15□□□□□ -2.22
SMNDC1-205ENST00000477763 NBEAL2Q6ZNJ1 2754 aa1.15□□□□□ -2.22
SMNDC1-205ENST00000477763 PCNX1Q96RV3 2341 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 TLN1Q9Y490 2541 aaKnown RBP1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 OTOGQ6ZRI0 2925 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 CD52P31358 61 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 C10orf113Q5VZT2 155 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 C6orf201Q7Z4U5 140 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 DEFB107AQ8IZN7 70 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 PROK2Q9HC23 129 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 DOCK11Q5JSL3 2073 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 ANK3Q12955 4377 aaKnown RBP1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 RYR1P21817 5038 aa1.15□□□□□ -2.23
SMNDC1-205ENST00000477763 EPPK1P58107 5090 aaKnown RBP1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 PKD1L1Q8TDX9 2849 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 ANKHD1Q8IWZ3 2542 aaKnown RBP1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 ACANP16112 2415 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 MED13LQ71F56 2210 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 BOD1L1Q8NFC6 3051 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 A0A087WXM4 84 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 K7EIL1 84 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 FXYD6P3P58550 94 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 Q9Y3F1 56 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 SPTBN1Q01082 2364 aaKnown RBP1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 APCP25054 2843 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 JMJD1CQ15652 2540 aa1.14□□□□□ -2.23
SMNDC1-205ENST00000477763 TACC2O95359 2948 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 COL6A5A8TX70 2615 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 ATRQ13535 2644 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 VPS13CQ709C8 3753 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 PRRC2CQ9Y520 2896 aaKnown RBP1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 TRBV7-4A0A0J9YYF1 115 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 TRBV6-1A0A0K0K1D8 114 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 A0A1B0GUT8 65 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 S100A3P33764 101 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 SPINK7P58062 85 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 CELSR1Q9NYQ6 3014 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 NOTCH1P46531 2555 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 TGP01266 2768 aa1.13□□□□□ -2.23
SMNDC1-205ENST00000477763 BIRC6Q9NR09 4857 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 CCDC168Q8NDH2 2452 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 A0A087WWC5 75 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 IFI27P40305 119 aaPredicted RBP1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 HAMPP81172 84 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 HIVEP3Q5T1R4 2406 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 HYDINQ4G0P3 5121 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 CSMD2Q7Z408 3487 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 ZNF236Q9UL36 1845 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 BSNQ9UPA5 3926 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 TLN2Q9Y4G6 2542 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 ADGRG4Q8IZF6 3080 aa1.12□□□□□ -2.23
SMNDC1-205ENST00000477763 STAB1Q9NY15 2570 aa1.11□□□□□ -2.23
SMNDC1-205ENST00000477763 CNTRLQ7Z7A1 2325 aa1.11□□□□□ -2.23
SMNDC1-205ENST00000477763 FLNAP21333 2647 aaKnown RBP1.11□□□□□ -2.23
SMNDC1-205ENST00000477763 TSC2P49815 1807 aa1.11□□□□□ -2.23
SMNDC1-205ENST00000477763 MXRA5Q9NR99 2828 aa1.11□□□□□ -2.23
SMNDC1-205ENST00000477763 RYR2Q92736 4967 aa1.11□□□□□ -2.23
SMNDC1-205ENST00000477763 ZNF469Q96JG9 3925 aaPredicted RBP1.1□□□□□ -2.23
SMNDC1-205ENST00000477763 ROS1P08922 2347 aa1.1□□□□□ -2.23
SMNDC1-205ENST00000477763 CMYA5Q8N3K9 4069 aa1.1□□□□□ -2.23
SMNDC1-205ENST00000477763 PCLOQ9Y6V0 5065 aa1.1□□□□□ -2.23
SMNDC1-205ENST00000477763 NDUFB1O75438 58 aa1.1□□□□□ -2.23
SMNDC1-205ENST00000477763 SFTA3P0C7M3 94 aa1.1□□□□□ -2.23
SMNDC1-205ENST00000477763 KMT2CQ8NEZ4 4911 aaKnown RBP1.1□□□□□ -2.23
SMNDC1-205ENST00000477763 CSPG4Q6UVK1 2322 aa1.1□□□□□ -2.23
SMNDC1-205ENST00000477763 DCHS2Q6V1P9 2916 aa1.09□□□□□ -2.23
SMNDC1-205ENST00000477763 NCOA6Q14686 2063 aaPredicted RBP1.09□□□□□ -2.23
SMNDC1-205ENST00000477763 MYO7BQ6PIF6 2116 aa1.09□□□□□ -2.23
SMNDC1-205ENST00000477763 UBR4Q5T4S7 5183 aa1.09□□□□□ -2.23
SMNDC1-205ENST00000477763 AKAP6Q13023 2319 aa1.09□□□□□ -2.23
SMNDC1-205ENST00000477763 COX8AP10176 69 aa1.09□□□□□ -2.23
SMNDC1-205ENST00000477763 PRB3Q04118 309 aaPredicted RBP1.09□□□□□ -2.23
SMNDC1-205ENST00000477763 ANKRD36A6QL64 1941 aa1.09□□□□□ -2.24
SMNDC1-205ENST00000477763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.09□□□□□ -2.242e-6■■■■□ 24.7
SMNDC1-205ENST00000477763 PKDREJQ9NTG1 2253 aa1.08□□□□□ -2.24
SMNDC1-205ENST00000477763 MGAM2Q2M2H8 2515 aa1.08□□□□□ -2.24
SMNDC1-205ENST00000477763 A0A1B0GU69 56 aa1.08□□□□□ -2.24
SMNDC1-205ENST00000477763 UBE2DNLQ8IWF7 75 aa1.08□□□□□ -2.24
SMNDC1-205ENST00000477763 SMR3AQ99954 134 aa1.08□□□□□ -2.24
SMNDC1-205ENST00000477763 GNG13Q9P2W3 67 aa1.08□□□□□ -2.24
SMNDC1-205ENST00000477763 SONP18583 2426 aaKnown RBP1.07□□□□□ -2.24
SMNDC1-205ENST00000477763 H3BVH4 76 aa1.07□□□□□ -2.24
SMNDC1-205ENST00000477763 TRAV21A0A0B4J279 112 aa1.06□□□□□ -2.24
SMNDC1-205ENST00000477763 IFI6P09912 130 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms