RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TRAV23DV6A0A075B6W5 121 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 A0A0B4J2C4 111 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 ETDCA0A1B0GVM5 59 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 SMR3BP02814 79 aaPredicted RBP2.11□□□□□ -2.07
UBR3-209ENST00000477461 VAMP3Q15836 100 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 C1orf137Q5JT78 98 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 LINC00337Q8N6G1 96 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 Q8NDZ9 215 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 PRO1854Q9UHT4 67 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 K7ERJ3 54 aa2.1□□□□□ -2.07
UBR3-209ENST00000477461 ZNF73O43830 326 aaPredicted RBP2.1□□□□□ -2.07
UBR3-209ENST00000477461 SNCGO76070 127 aa2.1□□□□□ -2.07
UBR3-209ENST00000477461 IGLV6-57P01721 117 aa2.1□□□□□ -2.07
UBR3-209ENST00000477461 COX6CP09669 75 aa2.1□□□□□ -2.07
UBR3-209ENST00000477461 PSMB2P49721 201 aa2.1□□□□□ -2.07
UBR3-209ENST00000477461 RPL37AP61513 92 aaKnown RBP2.1□□□□□ -2.07
UBR3-209ENST00000477461 FAM19A1Q7Z5A9 133 aa2.1□□□□□ -2.07
UBR3-209ENST00000477461 DIRC1Q969H9 104 aa2.1□□□□□ -2.07
UBR3-209ENST00000477461 SLC25A20O43772 301 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 BCE1O60756 84 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 SCGB1C2P0DMR2 95 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 COX7BP24311 80 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 RPL28P46779 137 aaKnown RBP2.09□□□□□ -2.07
UBR3-209ENST00000477461 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 C6orf99Q4VX62 202 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 COL5A1-AS1Q5SY13 56 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 LYRM7Q5U5X0 104 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 SMIM11BQ8TCY0 68 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 KCNQ1DNQ9H478 68 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 PSORS1C2Q9UIG4 136 aa2.09□□□□□ -2.07
UBR3-209ENST00000477461 DYNC2H1Q8NCM8 4307 aaKnown RBP2.09□□□□□ -2.08
UBR3-209ENST00000477461 TRBV7-6A0A0J9YX20 115 aa2.08□□□□□ -2.08
UBR3-209ENST00000477461 H0YGX0 51 aa2.08□□□□□ -2.08
UBR3-209ENST00000477461 IGLV7-43P04211 117 aa2.08□□□□□ -2.08
UBR3-209ENST00000477461 PRLHP81277 87 aa2.08□□□□□ -2.08
UBR3-209ENST00000477461 Q5VSD8 79 aa2.08□□□□□ -2.08
UBR3-209ENST00000477461 Q6ZRX8 168 aa2.08□□□□□ -2.08
UBR3-209ENST00000477461 HIGD2AQ9BW72 106 aa2.08□□□□□ -2.08
UBR3-209ENST00000477461 SNHG12Q9BXW3 62 aa2.08□□□□□ -2.08
UBR3-209ENST00000477461 H3BUT2 72 aa2.07□□□□□ -2.08
UBR3-209ENST00000477461 DNAL4O96015 105 aa2.07□□□□□ -2.08
UBR3-209ENST00000477461 INAFM2P0DMQ5 153 aa2.07□□□□□ -2.08
UBR3-209ENST00000477461 SPRR1AP35321 89 aa2.07□□□□□ -2.08
UBR3-209ENST00000477461 ELOF1P60002 83 aaKnown RBP2.07□□□□□ -2.08
UBR3-209ENST00000477461 NAA38Q9BRA0 125 aaKnown RBP2.07□□□□□ -2.08
UBR3-209ENST00000477461 ZNF706Q9Y5V0 76 aaPredicted RBP2.07□□□□□ -2.08
UBR3-209ENST00000477461 A0A1B0GX51 115 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 hADV29S1A0JD25 119 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 TAX1BP3O14907 124 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 FABP2P12104 132 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 ATXN8Q156A1 80 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 KRTAP13-2Q52LG2 175 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 SPINK6Q6UWN8 80 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 LINC00575Q6W349 94 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 SMCR5Q8TEV8 140 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 CLEC2BQ92478 149 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 LYSTQ99698 3801 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 PLECQ15149 4684 aaKnown RBP2.06□□□□□ -2.08
UBR3-209ENST00000477461 KMT2AQ03164 3969 aa2.06□□□□□ -2.08
UBR3-209ENST00000477461 DNAH6Q9C0G6 4158 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 TRBV20-1A0A075B6N2 111 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 A0A0U1RQV1 116 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 A0A1W2PPM0 123 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 OXTP01178 125 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 TRACP01848 142 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 OCIAD2Q56VL3 154 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.05□□□□□ -2.08
UBR3-209ENST00000477461 DEFB105AQ8NG35 78 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 Q9BRP9 147 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 SPCS1Q9Y6A9 102 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 VPS13DQ5THJ4 4388 aa2.05□□□□□ -2.08
UBR3-209ENST00000477461 F8WEM9 126 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 H3BQ85 93 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 LST1O00453 97 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 ERC2-IT1O76042 136 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 TCL1BO95988 128 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 Q6ZQY7 126 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 GTF2H5Q6ZYL4 71 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 KRTAP13-1Q8IUC0 172 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 SPRR4Q96PI1 79 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 ORMDL1Q9P0S3 153 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 LAMTOR3Q9UHA4 124 aa2.04□□□□□ -2.08
UBR3-209ENST00000477461 TEX49A0A1B0GTD5 131 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 C9JAW5 83 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 K7EP34 96 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 TMEM256-PLSCR3K7ERE1 68 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 BAALC-AS2P0C853 105 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 CRYGAP11844 174 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 KRTAP10-4P60372 401 aaPredicted RBP2.03□□□□□ -2.08
UBR3-209ENST00000477461 C9orf153Q5TBE3 101 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 ST20-AS1Q8NBB2 130 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 PPDPFLQ8WWR9 84 aa2.03□□□□□ -2.08
UBR3-209ENST00000477461 IGLV5-48A0A075B6I7 105 aa2.02□□□□□ -2.09
UBR3-209ENST00000477461 H3BMG7 143 aa2.02□□□□□ -2.09
UBR3-209ENST00000477461 BPY2O14599 106 aa2.02□□□□□ -2.09
UBR3-209ENST00000477461 SPRR1BP22528 89 aa2.02□□□□□ -2.09
UBR3-209ENST00000477461 FAM229BQ4G0N7 80 aa2.02□□□□□ -2.09
UBR3-209ENST00000477461 DNAH1Q9P2D7 4330 aa2.02□□□□□ -2.09
UBR3-209ENST00000477461 A0A1B0GV90 55 aa2.01□□□□□ -2.09
UBR3-209ENST00000477461 H3BT86 120 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms