RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-208ENST00000477440 CDIP1Q9H305 208 aa14.26□□□□□ -0.13
ARHGEF3-208ENST00000477440 UQCR10Q9UDW1 63 aa14.26□□□□□ -0.13
ARHGEF3-208ENST00000477440 PRO1854Q9UHT4 67 aa14.26□□□□□ -0.13
ARHGEF3-208ENST00000477440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF3-208ENST00000477440 CD164Q04900 197 aa14.23□□□□□ -0.13
ARHGEF3-208ENST00000477440 LIMD2Q9BT23 127 aa14.23□□□□□ -0.13
ARHGEF3-208ENST00000477440 KRTAP13-3Q3SY46 172 aa14.21□□□□□ -0.13
ARHGEF3-208ENST00000477440 FAM218AQ96MZ4 157 aa14.21□□□□□ -0.13
ARHGEF3-208ENST00000477440 F8WEM9 126 aa14.2□□□□□ -0.14
ARHGEF3-208ENST00000477440 H0YGX0 51 aa14.2□□□□□ -0.14
ARHGEF3-208ENST00000477440 K7ERJ3 54 aa14.18□□□□□ -0.14
ARHGEF3-208ENST00000477440 TRIAP1O43715 76 aa14.15□□□□□ -0.14
ARHGEF3-208ENST00000477440 PPDPFLQ8WWR9 84 aa14.15□□□□□ -0.14
ARHGEF3-208ENST00000477440 MUC17Q685J3 4493 aa14.13□□□□□ -0.15
ARHGEF3-208ENST00000477440 IGLV8-61A0A075B6I0 122 aa14.12□□□□□ -0.15
ARHGEF3-208ENST00000477440 SNCGO76070 127 aa14.11□□□□□ -0.15
ARHGEF3-208ENST00000477440 MUC2Q02817 5179 aa14.11□□□□□ -0.15
ARHGEF3-208ENST00000477440 OCIAD2Q56VL3 154 aa14.1□□□□□ -0.15
ARHGEF3-208ENST00000477440 SNHG12Q9BXW3 62 aa14.1□□□□□ -0.15
ARHGEF3-208ENST00000477440 Q5XG85 94 aa14.09□□□□□ -0.15
ARHGEF3-208ENST00000477440 Q6JHZ5 121 aa14.09□□□□□ -0.15
ARHGEF3-208ENST00000477440 IGFL1Q6UW32 110 aa14.09□□□□□ -0.15
ARHGEF3-208ENST00000477440 CLEC2BQ92478 149 aa14.08□□□□□ -0.16
ARHGEF3-208ENST00000477440 A0A1B0GX51 115 aa14.07□□□□□ -0.16
ARHGEF3-208ENST00000477440 SMIM6P0DI80 62 aa14.07□□□□□ -0.16
ARHGEF3-208ENST00000477440 H3BUT2 72 aa14.05□□□□□ -0.16
ARHGEF3-208ENST00000477440 PSMB2P49721 201 aa14.05□□□□□ -0.16
ARHGEF3-208ENST00000477440 C1orf195Q5TG92 126 aa14.02□□□□□ -0.17
ARHGEF3-208ENST00000477440 NDUFV3P56181 108 aaKnown RBP13.99□□□□□ -0.17
ARHGEF3-208ENST00000477440 TRBV7-7A0A0K0K1E9 115 aa13.98□□□□□ -0.17
ARHGEF3-208ENST00000477440 TCL1BO95988 128 aa13.97□□□□□ -0.17
ARHGEF3-208ENST00000477440 COX6CP09669 75 aa13.97□□□□□ -0.17
ARHGEF3-208ENST00000477440 FABP2P12104 132 aa13.96□□□□□ -0.17
ARHGEF3-208ENST00000477440 XP32Q5T750 250 aa13.96□□□□□ -0.17
ARHGEF3-208ENST00000477440 DNAL4O96015 105 aa13.94□□□□□ -0.18
ARHGEF3-208ENST00000477440 GHRHP01286 108 aa13.94□□□□□ -0.18
ARHGEF3-208ENST00000477440 LOC105371267A0A1B0GV96 52 aa13.93□□□□□ -0.18
ARHGEF3-208ENST00000477440 C9orf92A6NGG3 77 aa13.93□□□□□ -0.18
ARHGEF3-208ENST00000477440 ASB16-AS1Q495Z4 193 aa13.92□□□□□ -0.18
ARHGEF3-208ENST00000477440 ORMDL1Q9P0S3 153 aa13.91□□□□□ -0.18
ARHGEF3-208ENST00000477440 H3BMG7 143 aa13.9□□□□□ -0.18
ARHGEF3-208ENST00000477440 M0R143 59 aa13.9□□□□□ -0.18
ARHGEF3-208ENST00000477440 SCGB1C2P0DMR2 95 aa13.86□□□□□ -0.19
ARHGEF3-208ENST00000477440 SEC61BP60468 96 aaKnown RBP13.86□□□□□ -0.19
ARHGEF3-208ENST00000477440 Q6Q795 121 aa13.85□□□□□ -0.19
ARHGEF3-208ENST00000477440 TSTD3H0UI37 97 aa13.84□□□□□ -0.19
ARHGEF3-208ENST00000477440 LST1O00453 97 aa13.84□□□□□ -0.19
ARHGEF3-208ENST00000477440 TEN1Q86WV5 123 aa13.84□□□□□ -0.19
ARHGEF3-208ENST00000477440 TRACP01848 142 aa13.83□□□□□ -0.2
ARHGEF3-208ENST00000477440 A0A1B0GV72 72 aa13.82□□□□□ -0.2
ARHGEF3-208ENST00000477440 H3BQ85 93 aa13.82□□□□□ -0.2
ARHGEF3-208ENST00000477440 TMEM256-PLSCR3K7ERE1 68 aa13.81□□□□□ -0.2
ARHGEF3-208ENST00000477440 NAA38Q9BRA0 125 aaKnown RBP13.8□□□□□ -0.2
ARHGEF3-208ENST00000477440 A0A0U1RQV1 116 aa13.78□□□□□ -0.2
ARHGEF3-208ENST00000477440 KRTAP4-1Q9BYQ7 146 aa13.78□□□□□ -0.2
ARHGEF3-208ENST00000477440 A0A1W2PNM2 257 aa13.77□□□□□ -0.21
ARHGEF3-208ENST00000477440 SS18L2Q9UHA2 77 aa13.77□□□□□ -0.21
ARHGEF3-208ENST00000477440 A0A087WSZ3 146 aa13.76□□□□□ -0.21
ARHGEF3-208ENST00000477440 UBE2V1Q13404 147 aa13.74□□□□□ -0.21
ARHGEF3-208ENST00000477440 ANKRD29Q8N6D5 301 aa13.74□□□□□ -0.21
ARHGEF3-208ENST00000477440 FAT4Q6V0I7 4981 aa13.72□□□□□ -0.21
ARHGEF3-208ENST00000477440 BATFQ16520 125 aa13.71□□□□□ -0.21
ARHGEF3-208ENST00000477440 PCOTHQ58A44 107 aa13.69□□□□□ -0.22
ARHGEF3-208ENST00000477440 TRBV7-4A0A0J9YYF1 115 aa13.66□□□□□ -0.22
ARHGEF3-208ENST00000477440 BAALC-AS2P0C853 105 aa13.66□□□□□ -0.22
ARHGEF3-208ENST00000477440 ATXN8Q156A1 80 aa13.66□□□□□ -0.22
ARHGEF3-208ENST00000477440 Q96NJ1 140 aa13.66□□□□□ -0.22
ARHGEF3-208ENST00000477440 CCKP06307 115 aa13.63□□□□□ -0.23
ARHGEF3-208ENST00000477440 RPL37P61927 97 aaKnown RBP13.63□□□□□ -0.23
ARHGEF3-208ENST00000477440 RBM3P98179 157 aaKnown RBP13.61□□□□□ -0.23
ARHGEF3-208ENST00000477440 OBSCN-AS1Q96MR7 158 aa13.61□□□□□ -0.23
ARHGEF3-208ENST00000477440 LYRM7Q5U5X0 104 aa13.57□□□□□ -0.24
ARHGEF3-208ENST00000477440 DSCR8Q96T75 97 aa13.56□□□□□ -0.24
ARHGEF3-208ENST00000477440 VPS25Q9BRG1 176 aa13.56□□□□□ -0.24
ARHGEF3-208ENST00000477440 LCE2AQ5TA79 106 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF3-208ENST00000477440 SIGMAR1Q99720 223 aa13.53□□□□□ -0.24
ARHGEF3-208ENST00000477440 TAX1BP3O14907 124 aa13.52□□□□□ -0.25
ARHGEF3-208ENST00000477440 TRBV20-1A0A075B6N2 111 aa13.51□□□□□ -0.25
ARHGEF3-208ENST00000477440 C9orf118A6NHY6 69 aa13.51□□□□□ -0.25
ARHGEF3-208ENST00000477440 C9JAW5 83 aa13.49□□□□□ -0.25
ARHGEF3-208ENST00000477440 IGKV4-1P06312 121 aa13.48□□□□□ -0.25
ARHGEF3-208ENST00000477440 LINC00472Q9H8W2 130 aa13.48□□□□□ -0.25
ARHGEF3-208ENST00000477440 DEFB116Q30KQ4 102 aa13.47□□□□□ -0.25
ARHGEF3-208ENST00000477440 Q75L30 129 aa13.47□□□□□ -0.25
ARHGEF3-208ENST00000477440 JMJD7-PLA2G4BH0Y9G9 81 aa13.45□□□□□ -0.26
ARHGEF3-208ENST00000477440 A0A1W2PPM0 123 aa13.44□□□□□ -0.26
ARHGEF3-208ENST00000477440 DSCR10P59022 87 aa13.44□□□□□ -0.26
ARHGEF3-208ENST00000477440 Q6ZQT0 140 aa13.42□□□□□ -0.26
ARHGEF3-208ENST00000477440 LOC110117498A0A087WWA1 95 aa13.4□□□□□ -0.26
ARHGEF3-208ENST00000477440 C20orf166-AS1Q96NR2 134 aa13.39□□□□□ -0.27
ARHGEF3-208ENST00000477440 KRTAP19-2Q3LHN2 52 aa13.38□□□□□ -0.27
ARHGEF3-208ENST00000477440 C14orf132Q9NPU4 83 aa13.38□□□□□ -0.27
ARHGEF3-208ENST00000477440 A8MUU9 505 aa13.37□□□□□ -0.27
ARHGEF3-208ENST00000477440 ATP11AUNQ6ZP68 121 aa13.37□□□□□ -0.27
ARHGEF3-208ENST00000477440 MTURNQ8N3F0 131 aa13.37□□□□□ -0.27
ARHGEF3-208ENST00000477440 LINC00313P59037 77 aa13.35□□□□□ -0.27
ARHGEF3-208ENST00000477440 C21orf62-AS1Q17RA5 79 aa13.35□□□□□ -0.27
ARHGEF3-208ENST00000477440 LCE2CQ5TA81 110 aa13.35□□□□□ -0.27
ARHGEF3-208ENST00000477440 NOTCH2NLQ7Z3S9 236 aa13.34□□□□□ -0.27
ARHGEF3-208ENST00000477440 H3BT86 120 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms