RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 DEFB130AP0DP74 79 aa1.1□□□□□ -2.23
XRN1-211ENST00000477237 UBE2DNLQ8IWF7 75 aa1.1□□□□□ -2.23
XRN1-211ENST00000477237 USMG5Q96IX5 58 aa1.1□□□□□ -2.23
XRN1-211ENST00000477237 TOMM7Q9P0U1 55 aa1.1□□□□□ -2.23
XRN1-211ENST00000477237 COL6A3P12111 3177 aa1.1□□□□□ -2.23
XRN1-211ENST00000477237 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
XRN1-211ENST00000477237 BRD3OSQ6XYD6 125 aa1.09□□□□□ -2.23
XRN1-211ENST00000477237 CACNA1BQ00975 2339 aa1.09□□□□□ -2.24
XRN1-211ENST00000477237 UNQ6190/PRO20217Q6UXQ8 127 aa1.08□□□□□ -2.24
XRN1-211ENST00000477237 MYCBP2O75592 4640 aa1.08□□□□□ -2.24
XRN1-211ENST00000477237 ICE1Q9Y2F5 2266 aa1.08□□□□□ -2.24
XRN1-211ENST00000477237 TPRP12270 2363 aaKnown RBP1.07□□□□□ -2.24
XRN1-211ENST00000477237 COX14Q96I36 57 aa1.07□□□□□ -2.24
XRN1-211ENST00000477237 SPRR1AP35321 89 aa1.06□□□□□ -2.24
XRN1-211ENST00000477237 PCNX1Q96RV3 2341 aa1.06□□□□□ -2.24
XRN1-211ENST00000477237 FAM208BQ5VWN6 2430 aa1.06□□□□□ -2.24
XRN1-211ENST00000477237 ZDBF2Q9HCK1 2354 aa1.05□□□□□ -2.24
XRN1-211ENST00000477237 H0YGG7 62 aa1.05□□□□□ -2.24
XRN1-211ENST00000477237 DEFB109BQ30KR1 87 aa1.05□□□□□ -2.24
XRN1-211ENST00000477237 ASH1LQ9NR48 2969 aaKnown RBP1.05□□□□□ -2.24
XRN1-211ENST00000477237 DNAH8Q96JB1 4490 aa1.05□□□□□ -2.24
XRN1-211ENST00000477237 DSPP15924 2871 aaKnown RBP1.05□□□□□ -2.24
XRN1-211ENST00000477237 CEP350Q5VT06 3117 aa1.04□□□□□ -2.24
XRN1-211ENST00000477237 NBPF19A0A087WUL8 3843 aa1.04□□□□□ -2.24
XRN1-211ENST00000477237 WNK1Q9H4A3 2382 aa1.04□□□□□ -2.24
XRN1-211ENST00000477237 KRTAP13-4Q3LI77 160 aa1.04□□□□□ -2.24
XRN1-211ENST00000477237 BAHCC1Q9P281 2608 aa1.03□□□□□ -2.24
XRN1-211ENST00000477237 TENM2Q9NT68 2774 aa1.03□□□□□ -2.24
XRN1-211ENST00000477237 H3BUA1 57 aa1.03□□□□□ -2.24
XRN1-211ENST00000477237 APELAP0DMC3 54 aa1.03□□□□□ -2.24
XRN1-211ENST00000477237 DEFB105AQ8NG35 78 aa1.03□□□□□ -2.24
XRN1-211ENST00000477237 S4R3F8 94 aa1.03□□□□□ -2.24
XRN1-211ENST00000477237 CFAP54Q96N23 3096 aa1.03□□□□□ -2.24
XRN1-211ENST00000477237 WNK2Q9Y3S1 2297 aa1.03□□□□□ -2.25
XRN1-211ENST00000477237 MUC6Q6W4X9 2439 aa1.03□□□□□ -2.25
XRN1-211ENST00000477237 JMJD1CQ15652 2540 aa1.03□□□□□ -2.25
XRN1-211ENST00000477237 SPRR1BP22528 89 aa1.02□□□□□ -2.25
XRN1-211ENST00000477237 RANBP2P49792 3224 aaKnown RBP1.02□□□□□ -2.25
XRN1-211ENST00000477237 Q5VSD8 79 aa1.02□□□□□ -2.25
XRN1-211ENST00000477237 NBEAQ8NFP9 2946 aa1.02□□□□□ -2.25
XRN1-211ENST00000477237 CHD6Q8TD26 2715 aa1.02□□□□□ -2.25
XRN1-211ENST00000477237 SPTBN1Q01082 2364 aaKnown RBP1.01□□□□□ -2.25
XRN1-211ENST00000477237 CELSR2Q9HCU4 2923 aa1.01□□□□□ -2.25
XRN1-211ENST00000477237 HUWE1Q7Z6Z7 4374 aaKnown RBP1.01□□□□□ -2.25
XRN1-211ENST00000477237 VWFP04275 2813 aa1.01□□□□□ -2.25
XRN1-211ENST00000477237 AKAP9Q99996 3911 aa1.01□□□□□ -2.25
XRN1-211ENST00000477237 DEFB1P60022 68 aa1.01□□□□□ -2.25
XRN1-211ENST00000477237 APLNQ9ULZ1 77 aa1.01□□□□□ -2.25
XRN1-211ENST00000477237 ZNF462Q96JM2 2506 aa1.01□□□□□ -2.25
XRN1-211ENST00000477237 WDR87Q6ZQQ6 2873 aa1.01□□□□□ -2.25
XRN1-211ENST00000477237 SACSQ9NZJ4 4579 aa1.01□□□□□ -2.25
XRN1-211ENST00000477237 PTPRZ1P23471 2315 aaPredicted RBP1□□□□□ -2.25
XRN1-211ENST00000477237 TRANK1O15050 2925 aa1□□□□□ -2.25
XRN1-211ENST00000477237 PRLHP81277 87 aa1□□□□□ -2.25
XRN1-211ENST00000477237 DEFB103AP81534 67 aa1□□□□□ -2.25
XRN1-211ENST00000477237 DEFB119Q8N690 84 aa1□□□□□ -2.25
XRN1-211ENST00000477237 CRYBG3Q68DQ2 2970 aa1□□□□□ -2.25
XRN1-211ENST00000477237 CACNA1GO43497 2377 aa1□□□□□ -2.25
XRN1-211ENST00000477237 TNRC18O15417 2968 aaPredicted RBP0.99□□□□□ -2.25
XRN1-211ENST00000477237 PRO0255Q9UI72 69 aa0.99□□□□□ -2.25
XRN1-211ENST00000477237 PRRC2CQ9Y520 2896 aaKnown RBP0.99□□□□□ -2.25
XRN1-211ENST00000477237 SRCAPQ6ZRS2 3230 aa0.99□□□□□ -2.25
XRN1-211ENST00000477237 DNAH2Q9P225 4427 aa0.99□□□□□ -2.25
XRN1-211ENST00000477237 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
XRN1-211ENST00000477237 DNAH10Q8IVF4 4471 aa0.98□□□□□ -2.25
XRN1-211ENST00000477237 AKAP6Q13023 2319 aa0.98□□□□□ -2.25
XRN1-211ENST00000477237 FRYLO94915 3013 aa0.97□□□□□ -2.25
XRN1-211ENST00000477237 SPINK1P00995 79 aa0.97□□□□□ -2.25
XRN1-211ENST00000477237 KRTAP12-1P59990 96 aa0.97□□□□□ -2.25
XRN1-211ENST00000477237 DEFB110Q30KQ9 67 aa0.97□□□□□ -2.25
XRN1-211ENST00000477237 DYNC2H1Q8NCM8 4307 aaKnown RBP0.97□□□□□ -2.25
XRN1-211ENST00000477237 PKDREJQ9NTG1 2253 aa0.97□□□□□ -2.25
XRN1-211ENST00000477237 UBR5O95071 2799 aaPredicted RBP0.97□□□□□ -2.25
XRN1-211ENST00000477237 PRKDCP78527 4128 aaKnown RBP0.97□□□□□ -2.25
XRN1-211ENST00000477237 CELSR1Q9NYQ6 3014 aa0.97□□□□□ -2.25
XRN1-211ENST00000477237 FRAS1Q86XX4 4008 aa0.96□□□□□ -2.26
XRN1-211ENST00000477237 ROS1P08922 2347 aa0.96□□□□□ -2.26
XRN1-211ENST00000477237 CSPG4Q6UVK1 2322 aa0.96□□□□□ -2.26
XRN1-211ENST00000477237 BSNQ9UPA5 3926 aa0.96□□□□□ -2.26
XRN1-211ENST00000477237 BOD1L1Q8NFC6 3051 aa0.96□□□□□ -2.26
XRN1-211ENST00000477237 SPTBN4Q9H254 2564 aa0.96□□□□□ -2.26
XRN1-211ENST00000477237 ACACAQ13085 2346 aa0.95□□□□□ -2.26
XRN1-211ENST00000477237 RHPN1-AS1Q9BWJ2 59 aa0.95□□□□□ -2.26
XRN1-211ENST00000477237 NOP10Q9NPE3 64 aaKnown RBP0.95□□□□□ -2.26
XRN1-211ENST00000477237 DNAH1Q9P2D7 4330 aa0.95□□□□□ -2.26
XRN1-211ENST00000477237 TRIOO75962 3097 aa0.95□□□□□ -2.26
XRN1-211ENST00000477237 PRUNE2Q8WUY3 3088 aa0.95□□□□□ -2.26
XRN1-211ENST00000477237 DNAH7Q8WXX0 4024 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 SPTA1P02549 2419 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 H3BUX3 64 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 KRTAP6-3Q3LI67 103 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 VPS13AQ96RL7 3174 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 DNAH3Q8TD57 4116 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 GOLGB1Q14789 3259 aaKnown RBP0.94□□□□□ -2.26
XRN1-211ENST00000477237 C5orf42Q9H799 3197 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 RELNP78509 3460 aa0.94□□□□□ -2.26
XRN1-211ENST00000477237 HTTP42858 3142 aa0.93□□□□□ -2.26
XRN1-211ENST00000477237 F8P00451 2351 aa0.93□□□□□ -2.26
XRN1-211ENST00000477237 SRRM2Q9UQ35 2752 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms