RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 DEFB113Q30KQ7 82 aa6.67□□□□□ -1.34
ABCF1-205ENST00000475993 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
ABCF1-205ENST00000475993 A0A0G2JQZ4 141 aa6.67□□□□□ -1.34
ABCF1-205ENST00000475993 A0A1W2PNN7 141 aa6.67□□□□□ -1.34
ABCF1-205ENST00000475993 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
ABCF1-205ENST00000475993 MTORP42345 2549 aa6.66□□□□□ -1.34
ABCF1-205ENST00000475993 TLX1NBP0CAT3 122 aa6.66□□□□□ -1.34
ABCF1-205ENST00000475993 KRTAP10-9P60411 292 aa6.66□□□□□ -1.34
ABCF1-205ENST00000475993 IGLV7-46A0A075B6I9 117 aa6.66□□□□□ -1.34
ABCF1-205ENST00000475993 RPL37AP61513 92 aaKnown RBP6.66□□□□□ -1.34
ABCF1-205ENST00000475993 ANK3Q12955 4377 aaKnown RBP6.65□□□□□ -1.34
ABCF1-205ENST00000475993 A0A087WSZ3 146 aa6.65□□□□□ -1.35
ABCF1-205ENST00000475993 FAM168BA1KXE4 195 aa6.65□□□□□ -1.35
ABCF1-205ENST00000475993 KRTAP1-3Q8IUG1 177 aa6.65□□□□□ -1.35
ABCF1-205ENST00000475993 CNBPP62633 177 aaKnown RBP6.64□□□□□ -1.35
ABCF1-205ENST00000475993 KRTAP7-1Q8IUC3 87 aa6.64□□□□□ -1.35
ABCF1-205ENST00000475993 ACANP16112 2415 aa6.64□□□□□ -1.35
ABCF1-205ENST00000475993 HIVEP2P31629 2446 aa6.64□□□□□ -1.35
ABCF1-205ENST00000475993 IGLV8-61A0A075B6I0 122 aa6.63□□□□□ -1.35
ABCF1-205ENST00000475993 CSAG1Q6PB30 78 aa6.63□□□□□ -1.35
ABCF1-205ENST00000475993 PCOTHQ58A44 107 aa6.62□□□□□ -1.35
ABCF1-205ENST00000475993 OTOGQ6ZRI0 2925 aa6.61□□□□□ -1.35
ABCF1-205ENST00000475993 H0Y9J4 135 aa6.6□□□□□ -1.35
ABCF1-205ENST00000475993 H3BNG1 76 aa6.6□□□□□ -1.35
ABCF1-205ENST00000475993 ITPR3Q14573 2671 aa6.59□□□□□ -1.35
ABCF1-205ENST00000475993 A8MWP4 228 aa6.59□□□□□ -1.35
ABCF1-205ENST00000475993 KRTAP10-3P60369 221 aa6.59□□□□□ -1.35
ABCF1-205ENST00000475993 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
ABCF1-205ENST00000475993 RTL8CO15255 209 aa6.58□□□□□ -1.36
ABCF1-205ENST00000475993 Q6ZR54 194 aa6.58□□□□□ -1.36
ABCF1-205ENST00000475993 LINC01556Q5JQF7 62 aa6.57□□□□□ -1.36
ABCF1-205ENST00000475993 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
ABCF1-205ENST00000475993 LINC00472Q9H8W2 130 aa6.57□□□□□ -1.36
ABCF1-205ENST00000475993 UBR5O95071 2799 aaPredicted RBP6.56□□□□□ -1.36
ABCF1-205ENST00000475993 UNC79Q9P2D8 2635 aa6.55□□□□□ -1.36
ABCF1-205ENST00000475993 USP24Q9UPU5 2620 aa6.55□□□□□ -1.36
ABCF1-205ENST00000475993 MMP24-AS1A0A0U1RRL7 71 aa6.55□□□□□ -1.36
ABCF1-205ENST00000475993 VWFP04275 2813 aa6.54□□□□□ -1.36
ABCF1-205ENST00000475993 ASB16-AS1Q495Z4 193 aa6.54□□□□□ -1.36
ABCF1-205ENST00000475993 F8P00451 2351 aa6.54□□□□□ -1.36
ABCF1-205ENST00000475993 FLNAP21333 2647 aaKnown RBP6.53□□□□□ -1.36
ABCF1-205ENST00000475993 HIVEP1P15822 2718 aa6.53□□□□□ -1.36
ABCF1-205ENST00000475993 HRES1P13985 223 aa6.53□□□□□ -1.36
ABCF1-205ENST00000475993 J3QL48 77 aa6.52□□□□□ -1.37
ABCF1-205ENST00000475993 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
ABCF1-205ENST00000475993 PRLHP81277 87 aa6.51□□□□□ -1.37
ABCF1-205ENST00000475993 TP53AIP1Q9HCN2 124 aa6.5□□□□□ -1.37
ABCF1-205ENST00000475993 DNAH10OSP0CZ25 163 aa6.49□□□□□ -1.37
ABCF1-205ENST00000475993 CASC10Q5T4H9 136 aa6.49□□□□□ -1.37
ABCF1-205ENST00000475993 IGKV2-24A0A0C4DH68 120 aa6.48□□□□□ -1.37
ABCF1-205ENST00000475993 SPRR1BP22528 89 aa6.47□□□□□ -1.37
ABCF1-205ENST00000475993 PKD1L1Q8TDX9 2849 aa6.47□□□□□ -1.37
ABCF1-205ENST00000475993 FASNP49327 2511 aaKnown RBP6.46□□□□□ -1.37
ABCF1-205ENST00000475993 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.38
ABCF1-205ENST00000475993 ITPR2Q14571 2701 aa6.46□□□□□ -1.38
ABCF1-205ENST00000475993 A0A087X002 238 aa6.45□□□□□ -1.38
ABCF1-205ENST00000475993 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
ABCF1-205ENST00000475993 HECTD1Q9ULT8 2610 aa6.45□□□□□ -1.38
ABCF1-205ENST00000475993 ROMO1P60602 79 aa6.44□□□□□ -1.38
ABCF1-205ENST00000475993 DEFB131BA0A096LNP1 70 aa6.44□□□□□ -1.38
ABCF1-205ENST00000475993 TENM2Q9NT68 2774 aa6.43□□□□□ -1.38
ABCF1-205ENST00000475993 HELZ2Q9BYK8 2649 aaKnown RBP6.43□□□□□ -1.38
ABCF1-205ENST00000475993 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
ABCF1-205ENST00000475993 Q96NJ1 140 aa6.42□□□□□ -1.38
ABCF1-205ENST00000475993 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
ABCF1-205ENST00000475993 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
ABCF1-205ENST00000475993 A0A096LNI7 61 aa6.39□□□□□ -1.39
ABCF1-205ENST00000475993 DNAH1Q9P2D7 4330 aa6.39□□□□□ -1.39
ABCF1-205ENST00000475993 SRRM2Q9UQ35 2752 aaKnown RBP6.38□□□□□ -1.39
ABCF1-205ENST00000475993 A0A1B0GU69 56 aa6.38□□□□□ -1.39
ABCF1-205ENST00000475993 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
ABCF1-205ENST00000475993 TRRAPQ9Y4A5 3859 aa6.37□□□□□ -1.39
ABCF1-205ENST00000475993 BAHCC1Q9P281 2608 aa6.37□□□□□ -1.39
ABCF1-205ENST00000475993 FLNBO75369 2602 aaKnown RBP6.36□□□□□ -1.39
ABCF1-205ENST00000475993 TENM4Q6N022 2769 aa6.35□□□□□ -1.39
ABCF1-205ENST00000475993 MRPL34Q9BQ48 92 aaKnown RBP6.35□□□□□ -1.39
ABCF1-205ENST00000475993 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
ABCF1-205ENST00000475993 J3QKU1 62 aa6.34□□□□□ -1.39
ABCF1-205ENST00000475993 ZNF861PO60384 105 aa6.34□□□□□ -1.39
ABCF1-205ENST00000475993 UQCR11O14957 56 aa6.33□□□□□ -1.4
ABCF1-205ENST00000475993 PDZD2O15018 2839 aa6.33□□□□□ -1.4
ABCF1-205ENST00000475993 TENM1Q9UKZ4 2725 aa6.33□□□□□ -1.4
ABCF1-205ENST00000475993 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
ABCF1-205ENST00000475993 INAFM1C9JVW0 142 aa6.32□□□□□ -1.4
ABCF1-205ENST00000475993 ACYP2P14621 99 aa6.32□□□□□ -1.4
ABCF1-205ENST00000475993 TENM3Q9P273 2699 aa6.31□□□□□ -1.4
ABCF1-205ENST00000475993 P0C880 135 aa6.31□□□□□ -1.4
ABCF1-205ENST00000475993 TEP1Q99973 2627 aaKnown RBP6.3□□□□□ -1.4
ABCF1-205ENST00000475993 K7EIL1 84 aa6.3□□□□□ -1.4
ABCF1-205ENST00000475993 ATRQ13535 2644 aa6.3□□□□□ -1.4
ABCF1-205ENST00000475993 KRTAP13-3Q3SY46 172 aa6.3□□□□□ -1.4
ABCF1-205ENST00000475993 CSMD3Q7Z407 3707 aa6.3□□□□□ -1.4
ABCF1-205ENST00000475993 KMT2BQ9UMN6 2715 aaPredicted RBP6.3□□□□□ -1.4
ABCF1-205ENST00000475993 KRTAP25-1Q3LHN0 102 aa6.29□□□□□ -1.4
ABCF1-205ENST00000475993 SMR3AQ99954 134 aa6.29□□□□□ -1.4
ABCF1-205ENST00000475993 NOTCH2NLQ7Z3S9 236 aa6.28□□□□□ -1.4
ABCF1-205ENST00000475993 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
ABCF1-205ENST00000475993 Q5W150 140 aa6.28□□□□□ -1.4
ABCF1-205ENST00000475993 CHTF8P0CG12 524 aa6.27□□□□□ -1.41
ABCF1-205ENST00000475993 DMAC1Q96GE9 116 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms