RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 AHCTF1Q8WYP5 2266 aa1.79□□□□□ -2.12
SDHB-205ENST00000475506 CACNA1EQ15878 2313 aa1.79□□□□□ -2.12
SDHB-205ENST00000475506 A0A096LPF7 62 aa1.79□□□□□ -2.12
SDHB-205ENST00000475506 DEFB136Q30KP8 78 aa1.79□□□□□ -2.12
SDHB-205ENST00000475506 CCL19Q99731 98 aa1.79□□□□□ -2.12
SDHB-205ENST00000475506 PCNTO95613 3336 aa1.78□□□□□ -2.12
SDHB-205ENST00000475506 SSBP3-AS1Q7Z2R9 100 aa1.78□□□□□ -2.12
SDHB-205ENST00000475506 ZFHX3Q15911 3703 aa1.78□□□□□ -2.12
SDHB-205ENST00000475506 FAM186AA6NE01 2351 aa1.78□□□□□ -2.12
SDHB-205ENST00000475506 SPTBN1Q01082 2364 aaKnown RBP1.78□□□□□ -2.12
SDHB-205ENST00000475506 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
SDHB-205ENST00000475506 LY6G6CO95867 125 aa1.77□□□□□ -2.13
SDHB-205ENST00000475506 KRTAP10-4P60372 401 aaPredicted RBP1.77□□□□□ -2.13
SDHB-205ENST00000475506 CEP250Q9BV73 2442 aa1.77□□□□□ -2.13
SDHB-205ENST00000475506 SPART-AS1P0CW21 52 aa1.76□□□□□ -2.13
SDHB-205ENST00000475506 SPRR1BP22528 89 aa1.76□□□□□ -2.13
SDHB-205ENST00000475506 C10orf99Q6UWK7 81 aa1.75□□□□□ -2.13
SDHB-205ENST00000475506 HTN3P15516 51 aa1.74□□□□□ -2.13
SDHB-205ENST00000475506 SRCAPQ6ZRS2 3230 aa1.74□□□□□ -2.13
SDHB-205ENST00000475506 PKDREJQ9NTG1 2253 aa1.74□□□□□ -2.13
SDHB-205ENST00000475506 SPTBN2O15020 2390 aa1.73□□□□□ -2.13
SDHB-205ENST00000475506 ROS1P08922 2347 aa1.73□□□□□ -2.13
SDHB-205ENST00000475506 H3BNG1 76 aa1.73□□□□□ -2.13
SDHB-205ENST00000475506 CRIPTQ9P021 101 aa1.73□□□□□ -2.13
SDHB-205ENST00000475506 DNAH12Q6ZR08 3092 aa1.73□□□□□ -2.13
SDHB-205ENST00000475506 WNK1Q9H4A3 2382 aa1.72□□□□□ -2.13
SDHB-205ENST00000475506 APC2O95996 2303 aa1.72□□□□□ -2.13
SDHB-205ENST00000475506 CEP350Q5VT06 3117 aa1.72□□□□□ -2.13
SDHB-205ENST00000475506 A0A087WTM6 91 aa1.72□□□□□ -2.13
SDHB-205ENST00000475506 CENPFP49454 3210 aa1.72□□□□□ -2.13
SDHB-205ENST00000475506 TRIOBPQ9H2D6 2365 aa1.72□□□□□ -2.13
SDHB-205ENST00000475506 GOLGB1Q14789 3259 aaKnown RBP1.71□□□□□ -2.14
SDHB-205ENST00000475506 PRLHP81277 87 aa1.71□□□□□ -2.14
SDHB-205ENST00000475506 LINC01556Q5JQF7 62 aa1.71□□□□□ -2.14
SDHB-205ENST00000475506 Q96NJ1 140 aa1.71□□□□□ -2.14
SDHB-205ENST00000475506 COL6A3P12111 3177 aa1.71□□□□□ -2.14
SDHB-205ENST00000475506 MAP1BP46821 2468 aaKnown RBP1.71□□□□□ -2.14
SDHB-205ENST00000475506 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
SDHB-205ENST00000475506 COX6B2Q6YFQ2 88 aa1.7□□□□□ -2.14
SDHB-205ENST00000475506 DEFB124Q8NES8 71 aa1.7□□□□□ -2.14
SDHB-205ENST00000475506 TPRP12270 2363 aaKnown RBP1.69□□□□□ -2.14
SDHB-205ENST00000475506 A0A096LNI7 61 aa1.69□□□□□ -2.14
SDHB-205ENST00000475506 PCNX1Q96RV3 2341 aa1.69□□□□□ -2.14
SDHB-205ENST00000475506 PTPRZ1P23471 2315 aaPredicted RBP1.68□□□□□ -2.14
SDHB-205ENST00000475506 NBDYA0A0U1RRE5 68 aa1.68□□□□□ -2.14
SDHB-205ENST00000475506 H0YAA0 97 aa1.68□□□□□ -2.14
SDHB-205ENST00000475506 SPINK1P00995 79 aa1.68□□□□□ -2.14
SDHB-205ENST00000475506 KMT2BQ9UMN6 2715 aaPredicted RBP1.68□□□□□ -2.14
SDHB-205ENST00000475506 K7EIL1 84 aa1.67□□□□□ -2.14
SDHB-205ENST00000475506 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
SDHB-205ENST00000475506 DEFB135Q30KP9 77 aa1.67□□□□□ -2.14
SDHB-205ENST00000475506 SPINK6Q6UWN8 80 aa1.67□□□□□ -2.14
SDHB-205ENST00000475506 MGAQ8IWI9 3026 aa1.67□□□□□ -2.14
SDHB-205ENST00000475506 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
SDHB-205ENST00000475506 ZZEF1O43149 2961 aa1.67□□□□□ -2.14
SDHB-205ENST00000475506 DEFB4AO15263 64 aa1.66□□□□□ -2.14
SDHB-205ENST00000475506 CNOT1A5YKK6 2376 aaKnown RBP1.66□□□□□ -2.14
SDHB-205ENST00000475506 UTRNP46939 3433 aa1.66□□□□□ -2.14
SDHB-205ENST00000475506 AKAP6Q13023 2319 aa1.66□□□□□ -2.14
SDHB-205ENST00000475506 EP300Q09472 2414 aaPredicted RBP1.65□□□□□ -2.15
SDHB-205ENST00000475506 TNRC18O15417 2968 aaPredicted RBP1.65□□□□□ -2.15
SDHB-205ENST00000475506 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.64□□□□□ -2.159e-8■■■■■ 29.1
SDHB-205ENST00000475506 ACACAQ13085 2346 aa1.63□□□□□ -2.15
SDHB-205ENST00000475506 PLAC4Q8WY50 150 aa1.63□□□□□ -2.15
SDHB-205ENST00000475506 UNC80Q8N2C7 3258 aa1.62□□□□□ -2.15
SDHB-205ENST00000475506 RANBP2P49792 3224 aaKnown RBP1.62□□□□□ -2.15
SDHB-205ENST00000475506 SZT2Q5T011 3432 aa1.62□□□□□ -2.15
SDHB-205ENST00000475506 ALMS1Q8TCU4 4167 aa1.62□□□□□ -2.15
SDHB-205ENST00000475506 EP400Q96L91 3159 aa1.62□□□□□ -2.15
SDHB-205ENST00000475506 NBEAQ8NFP9 2946 aa1.61□□□□□ -2.15
SDHB-205ENST00000475506 CACNA1HO95180 2353 aa1.61□□□□□ -2.15
SDHB-205ENST00000475506 VPS13AQ96RL7 3174 aa1.6□□□□□ -2.15
SDHB-205ENST00000475506 APLNQ9ULZ1 77 aa1.6□□□□□ -2.15
SDHB-205ENST00000475506 SPTA1P02549 2419 aa1.6□□□□□ -2.15
SDHB-205ENST00000475506 C2CD3Q4AC94 2353 aa1.59□□□□□ -2.15
SDHB-205ENST00000475506 UBE2DNLQ8IWF7 75 aa1.59□□□□□ -2.15
SDHB-205ENST00000475506 ANKHD1Q8IWZ3 2542 aaKnown RBP1.59□□□□□ -2.16
SDHB-205ENST00000475506 DNAH14Q0VDD8 3507 aa1.58□□□□□ -2.16
SDHB-205ENST00000475506 TRIOO75962 3097 aa1.58□□□□□ -2.16
SDHB-205ENST00000475506 ZDBF2Q9HCK1 2354 aa1.58□□□□□ -2.16
SDHB-205ENST00000475506 C5orf42Q9H799 3197 aa1.58□□□□□ -2.16
SDHB-205ENST00000475506 KALRNO60229 2985 aa1.58□□□□□ -2.16
SDHB-205ENST00000475506 FRYLO94915 3013 aa1.58□□□□□ -2.16
SDHB-205ENST00000475506 FRYQ5TBA9 3013 aa1.58□□□□□ -2.16
SDHB-205ENST00000475506 CFAP47Q6ZTR5 3102 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 MKI67P46013 3256 aaKnown RBP1.57□□□□□ -2.16
SDHB-205ENST00000475506 NCOR1O75376 2440 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 SPG11Q96JI7 2443 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 CFAP54Q96N23 3096 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 WDFY4Q6ZS81 3184 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 A0A0D9SG42 100 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 C10orf95Q9H7T3 257 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 TRANK1O15050 2925 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 PRUNE2Q8WUY3 3088 aa1.57□□□□□ -2.16
SDHB-205ENST00000475506 SPTAN1Q13813 2472 aaKnown RBP1.57□□□□□ -2.16
SDHB-205ENST00000475506 PIEZO2Q9H5I5 2752 aa1.56□□□□□ -2.16
SDHB-205ENST00000475506 CREBBPQ92793 2442 aa1.56□□□□□ -2.16
SDHB-205ENST00000475506 ABCA2Q9BZC7 2435 aa1.56□□□□□ -2.16
SDHB-205ENST00000475506 CHD7Q9P2D1 2997 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms