RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 C7orf65Q6ZTY9 151 aa2.53□□□□□ -2
USP16-205ENST00000474835 MMP24-AS1A0A0U1RRL7 71 aa2.52□□□□□ -2.01
USP16-205ENST00000474835 H0Y9J4 135 aa2.52□□□□□ -2.01
USP16-205ENST00000474835 NDUFB1O75438 58 aa2.52□□□□□ -2.01
USP16-205ENST00000474835 LINC00269Q8N2A0 174 aa2.52□□□□□ -2.01
USP16-205ENST00000474835 TEP1Q99973 2627 aaKnown RBP2.52□□□□□ -2.01
USP16-205ENST00000474835 XP32Q5T750 250 aa2.52□□□□□ -2.01
USP16-205ENST00000474835 LRCOL1A6NCL2 159 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 UBE2AP49459 152 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 CMC4P56277 68 aaPredicted RBP2.51□□□□□ -2.01
USP16-205ENST00000474835 C7orf33Q8WU49 177 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 B9D2Q9BPU9 175 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 KRTAP9-2Q9BYQ4 174 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 NOP10Q9NPE3 64 aaKnown RBP2.51□□□□□ -2.01
USP16-205ENST00000474835 IGSF10Q6WRI0 2623 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 MYO18BQ8IUG5 2567 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 PKD1L2Q7Z442 2459 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 TRGV1A0A0A0MS02 117 aa2.51□□□□□ -2.01
USP16-205ENST00000474835 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.51□□□□□ -2.01
USP16-205ENST00000474835 MRPL55Q7Z7F7 128 aaKnown RBP2.51□□□□□ -2.01
USP16-205ENST00000474835 TENM3Q9P273 2699 aa2.5□□□□□ -2.01
USP16-205ENST00000474835 REG3AQ06141 175 aa2.5□□□□□ -2.01
USP16-205ENST00000474835 LELP1Q5T871 98 aa2.5□□□□□ -2.01
USP16-205ENST00000474835 SERTAD4-AS1Q5TG53 156 aa2.5□□□□□ -2.01
USP16-205ENST00000474835 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
USP16-205ENST00000474835 MTORP42345 2549 aa2.5□□□□□ -2.01
USP16-205ENST00000474835 C11orf45Q8TAV5 145 aa2.5□□□□□ -2.01
USP16-205ENST00000474835 APOBP04114 4563 aaKnown RBP2.5□□□□□ -2.01
USP16-205ENST00000474835 A0A096LPF7 62 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 KRTAP10-3P60369 221 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 SCXQ7RTU7 201 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 ZNF462Q96JM2 2506 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 DEFB131BA0A096LNP1 70 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 RPL37AP8A6NKH3 93 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 KHDC1LQ5JSQ8 128 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 KRTAP9-6A0A140TA67 174 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 LINC00483Q53H64 154 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 IGFL1Q6UW32 110 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 PRO0255Q9UI72 69 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 NBEAL1Q6ZS30 2694 aa2.49□□□□□ -2.01
USP16-205ENST00000474835 HAMPP81172 84 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 DGAT2L7PQ6IED9 249 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 FAM30AQ9NZY2 134 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 DHRS4-AS1Q9P1J3 65 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 ACANP16112 2415 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 STARD9Q9P2P6 4700 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 DEFB136Q30KP8 78 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 ITPR2Q14571 2701 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 HRES1P13985 223 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 SPINK7P58062 85 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 LY6EQ16553 131 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 LINC00208Q96KT6 92 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 FAT3Q8TDW7 4589 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 ACACBO00763 2458 aa2.48□□□□□ -2.01
USP16-205ENST00000474835 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
USP16-205ENST00000474835 PRB2P02812 416 aaPredicted RBP2.47□□□□□ -2.01
USP16-205ENST00000474835 COA5Q86WW8 74 aa2.47□□□□□ -2.01
USP16-205ENST00000474835 SPAG11BQ08648 103 aa2.47□□□□□ -2.01
USP16-205ENST00000474835 A8MWP4 228 aa2.46□□□□□ -2.02
USP16-205ENST00000474835 IGLV10-54A0A075B6I4 117 aa2.46□□□□□ -2.02
USP16-205ENST00000474835 APOC4P55056 127 aa2.46□□□□□ -2.02
USP16-205ENST00000474835 PSPHP1O15172 72 aa2.46□□□□□ -2.02
USP16-205ENST00000474835 GYPEP15421 78 aa2.46□□□□□ -2.02
USP16-205ENST00000474835 RNASE1P07998 156 aaKnown RBP2.45□□□□□ -2.02
USP16-205ENST00000474835 HIGD2BQ4VC39 106 aa2.45□□□□□ -2.02
USP16-205ENST00000474835 C1orf137Q5JT78 98 aa2.45□□□□□ -2.02
USP16-205ENST00000474835 KRTAP11-1Q8IUC1 163 aa2.45□□□□□ -2.02
USP16-205ENST00000474835 LINC00476Q8WZB0 136 aa2.45□□□□□ -2.02
USP16-205ENST00000474835 MDFIQ99750 246 aa2.45□□□□□ -2.02
USP16-205ENST00000474835 FLNAP21333 2647 aaKnown RBP2.45□□□□□ -2.02
USP16-205ENST00000474835 WFDC10AQ9H1F0 79 aa2.45□□□□□ -2.02
USP16-205ENST00000474835 MEGF8Q7Z7M0 2845 aa2.45□□□□□ -2.02
USP16-205ENST00000474835 IGKV2-24A0A0C4DH68 120 aa2.44□□□□□ -2.02
USP16-205ENST00000474835 LINC00313P59037 77 aa2.44□□□□□ -2.02
USP16-205ENST00000474835 FAM168BA1KXE4 195 aa2.44□□□□□ -2.02
USP16-205ENST00000474835 DNAH10OSP0CZ25 163 aa2.44□□□□□ -2.02
USP16-205ENST00000474835 DMAC1Q96GE9 116 aa2.44□□□□□ -2.02
USP16-205ENST00000474835 TOMM7Q9P0U1 55 aa2.44□□□□□ -2.02
USP16-205ENST00000474835 LINC01556Q5JQF7 62 aa2.44□□□□□ -2.02
USP16-205ENST00000474835 RPL37AP61513 92 aaKnown RBP2.43□□□□□ -2.02
USP16-205ENST00000474835 NOTCH2NLQ7Z3S9 236 aa2.43□□□□□ -2.02
USP16-205ENST00000474835 FAM208BQ5VWN6 2430 aa2.43□□□□□ -2.02
USP16-205ENST00000474835 A0A0G2JQZ4 141 aa2.43□□□□□ -2.02
USP16-205ENST00000474835 A0A1W2PNN7 141 aa2.43□□□□□ -2.02
USP16-205ENST00000474835 KRTAP16-1A8MUX0 517 aa2.43□□□□□ -2.02
USP16-205ENST00000474835 ZNF861PO60384 105 aa2.42□□□□□ -2.02
USP16-205ENST00000474835 PRR4Q16378 134 aa2.42□□□□□ -2.02
USP16-205ENST00000474835 MAPK1IP1LQ8NDC0 245 aa2.42□□□□□ -2.02
USP16-205ENST00000474835 NOTCH1P46531 2555 aa2.42□□□□□ -2.02
USP16-205ENST00000474835 CACNA1AO00555 2505 aa2.41□□□□□ -2.02
USP16-205ENST00000474835 H0Y9P7 68 aa2.41□□□□□ -2.02
USP16-205ENST00000474835 TP53AIP1Q9HCN2 124 aa2.41□□□□□ -2.02
USP16-205ENST00000474835 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
USP16-205ENST00000474835 HIVEP2P31629 2446 aa2.41□□□□□ -2.02
USP16-205ENST00000474835 DNAJC9-AS1A6NH13 148 aa2.41□□□□□ -2.02
USP16-205ENST00000474835 CCL19Q99731 98 aa2.41□□□□□ -2.02
USP16-205ENST00000474835 RETNQ9HD89 108 aa2.41□□□□□ -2.02
USP16-205ENST00000474835 FLNBO75369 2602 aaKnown RBP2.41□□□□□ -2.02
USP16-205ENST00000474835 MAST4O15021 2626 aa2.4□□□□□ -2.02
USP16-205ENST00000474835 HELZ2Q9BYK8 2649 aaKnown RBP2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms