RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 NSD1Q96L73 2696 aaPredicted RBP0.24□□□□□ -2.37
PGK1-202ENST00000474281 RALGAPBQ86X10 1494 aa0.24□□□□□ -2.37
PGK1-202ENST00000474281 PRO3102Q9H379 93 aa0.24□□□□□ -2.37
PGK1-202ENST00000474281 FLNBO75369 2602 aaKnown RBP0.24□□□□□ -2.37
PGK1-202ENST00000474281 H3BVH4 76 aa0.23□□□□□ -2.37
PGK1-202ENST00000474281 DEFA5Q01523 94 aa0.23□□□□□ -2.37
PGK1-202ENST00000474281 TNRC18O15417 2968 aaPredicted RBP0.23□□□□□ -2.37
PGK1-202ENST00000474281 ASXL1Q8IXJ9 1541 aa0.23□□□□□ -2.37
PGK1-202ENST00000474281 HFM1A2PYH4 1435 aa0.22□□□□□ -2.37
PGK1-202ENST00000474281 COL6A3P12111 3177 aa0.22□□□□□ -2.37
PGK1-202ENST00000474281 ACANP16112 2415 aa0.22□□□□□ -2.37
PGK1-202ENST00000474281 C3orf79P0CE67 100 aa0.22□□□□□ -2.37
PGK1-202ENST00000474281 DIP2AQ14689 1571 aa0.22□□□□□ -2.37
PGK1-202ENST00000474281 MROH1Q8NDA8 1641 aa0.21□□□□□ -2.38
PGK1-202ENST00000474281 LYSTQ99698 3801 aa0.21□□□□□ -2.38
PGK1-202ENST00000474281 DEFB135Q30KP9 77 aa0.2□□□□□ -2.38
PGK1-202ENST00000474281 ZANQ9Y493 2812 aa0.2□□□□□ -2.38
PGK1-202ENST00000474281 ZZEF1O43149 2961 aa0.2□□□□□ -2.38
PGK1-202ENST00000474281 MDN1Q9NU22 5596 aa0.19□□□□□ -2.38
PGK1-202ENST00000474281 LINC00158P58513 81 aa0.19□□□□□ -2.38
PGK1-202ENST00000474281 SPRR2GQ9BYE4 73 aa0.19□□□□□ -2.38
PGK1-202ENST00000474281 KCNQ1DNQ9H478 68 aa0.19□□□□□ -2.38
PGK1-202ENST00000474281 PKD1P98161 4303 aa0.19□□□□□ -2.38
PGK1-202ENST00000474281 NBASA2RRP1 2371 aa0.19□□□□□ -2.38
PGK1-202ENST00000474281 MADDQ8WXG6 1647 aa0.18□□□□□ -2.38
PGK1-202ENST00000474281 DEFB131BA0A096LNP1 70 aa0.18□□□□□ -2.38
PGK1-202ENST00000474281 H0YAA0 97 aa0.18□□□□□ -2.38
PGK1-202ENST00000474281 HILPDAQ9Y5L2 63 aa0.18□□□□□ -2.38
PGK1-202ENST00000474281 HECTD1Q9ULT8 2610 aa0.17□□□□□ -2.38
PGK1-202ENST00000474281 C3P01024 1663 aa0.17□□□□□ -2.38
PGK1-202ENST00000474281 DSTQ03001 7570 aaKnown RBP0.16□□□□□ -2.38
PGK1-202ENST00000474281 INO80Q9ULG1 1556 aaPredicted RBP0.16□□□□□ -2.38
PGK1-202ENST00000474281 ENHOQ6UWT2 76 aa0.16□□□□□ -2.38
PGK1-202ENST00000474281 UBL5Q9BZL1 73 aa0.16□□□□□ -2.38
PGK1-202ENST00000474281 PCNX1Q96RV3 2341 aa0.16□□□□□ -2.38
PGK1-202ENST00000474281 EFCAB5A4FU69 1503 aa0.16□□□□□ -2.38
PGK1-202ENST00000474281 LRP2P98164 4655 aa0.15□□□□□ -2.38
PGK1-202ENST00000474281 ATXN8Q156A1 80 aa0.15□□□□□ -2.39
PGK1-202ENST00000474281 NF1P21359 2839 aa0.15□□□□□ -2.39
PGK1-202ENST00000474281 PKD1L2Q7Z442 2459 aa0.14□□□□□ -2.39
PGK1-202ENST00000474281 CCDC180Q9P1Z9 1646 aa0.14□□□□□ -2.39
PGK1-202ENST00000474281 MRPL33O75394 65 aaKnown RBP0.14□□□□□ -2.39
PGK1-202ENST00000474281 SPRR2BP35325 72 aa0.14□□□□□ -2.39
PGK1-202ENST00000474281 LRP1BQ9NZR2 4599 aa0.14□□□□□ -2.39
PGK1-202ENST00000474281 LYNX1G3V0Z9 82 aa0.13□□□□□ -2.39
PGK1-202ENST00000474281 H0YGG7 62 aa0.13□□□□□ -2.39
PGK1-202ENST00000474281 COL6A5A8TX70 2615 aa0.12□□□□□ -2.39
PGK1-202ENST00000474281 TEP1Q99973 2627 aaKnown RBP0.12□□□□□ -2.39
PGK1-202ENST00000474281 CREBBPQ92793 2442 aa0.12□□□□□ -2.39
PGK1-202ENST00000474281 PKHD1P08F94 4074 aa0.12□□□□□ -2.39
PGK1-202ENST00000474281 ITPR1Q14643 2758 aa0.11□□□□□ -2.39
PGK1-202ENST00000474281 SETD2Q9BYW2 2564 aaPredicted RBP0.11□□□□□ -2.39
PGK1-202ENST00000474281 MUC2Q02817 5179 aa0.11□□□□□ -2.39
PGK1-202ENST00000474281 NEBP20929 6669 aa0.11□□□□□ -2.39
PGK1-202ENST00000474281 KIAA0586Q9BVV6 1533 aa0.1□□□□□ -2.39
PGK1-202ENST00000474281 GNG13Q9P2W3 67 aa0.1□□□□□ -2.39
PGK1-202ENST00000474281 UBR4Q5T4S7 5183 aa0.09□□□□□ -2.39
PGK1-202ENST00000474281 ANKRD11Q6UB99 2663 aaPredicted RBP0.09□□□□□ -2.39
PGK1-202ENST00000474281 PDZD2O15018 2839 aa0.09□□□□□ -2.39
PGK1-202ENST00000474281 KRTAP20-1Q3LI63 56 aa0.09□□□□□ -2.4
PGK1-202ENST00000474281 HTTP42858 3142 aa0.09□□□□□ -2.4
PGK1-202ENST00000474281 PCLOQ9Y6V0 5065 aa0.09□□□□□ -2.4
PGK1-202ENST00000474281 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
PGK1-202ENST00000474281 ANKHD1Q8IWZ3 2542 aaKnown RBP0.08□□□□□ -2.4
PGK1-202ENST00000474281 HIVEP1P15822 2718 aa0.08□□□□□ -2.4
PGK1-202ENST00000474281 STAB1Q9NY15 2570 aa0.08□□□□□ -2.4
PGK1-202ENST00000474281 COL12A1Q99715 3063 aa0.08□□□□□ -2.4
PGK1-202ENST00000474281 USP9XQ93008 2570 aaPredicted RBP0.07□□□□□ -2.4
PGK1-202ENST00000474281 SONP18583 2426 aaKnown RBP0.07□□□□□ -2.4
PGK1-202ENST00000474281 TEX15Q9BXT5 2789 aa0.07□□□□□ -2.4
PGK1-202ENST00000474281 LRRK2Q5S007 2527 aa0.07□□□□□ -2.4
PGK1-202ENST00000474281 ABCA6Q8N139 1617 aa0.07□□□□□ -2.4
PGK1-202ENST00000474281 ETDCA0A1B0GVM5 59 aa0.07□□□□□ -2.4
PGK1-202ENST00000474281 STAB2Q8WWQ8 2551 aa0.07□□□□□ -2.4
PGK1-202ENST00000474281 ITSN2Q9NZM3 1697 aa0.07□□□□□ -2.4
PGK1-202ENST00000474281 SPTBN4Q9H254 2564 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 TGP01266 2768 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 KALRNO60229 2985 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 NIPBLQ6KC79 2804 aaeCLIP0.06□□□□□ -2.4
PGK1-202ENST00000474281 MXRA5Q9NR99 2828 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 CEP295Q9C0D2 2601 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 A0A0C4DFX4 3053 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 ITPR3Q14573 2671 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 CRIP1P50238 77 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 DEFB114Q30KQ6 69 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 UTP20O75691 2785 aaKnown RBP0.06□□□□□ -2.4
PGK1-202ENST00000474281 NBEAL2Q6ZNJ1 2754 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
PGK1-202ENST00000474281 USP9YO00507 2555 aaPredicted RBP0.06□□□□□ -2.4
PGK1-202ENST00000474281 MYO18BQ8IUG5 2567 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 CELSR3Q9NYQ7 3312 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 GCN1Q92616 2671 aaKnown RBP0.06□□□□□ -2.4
PGK1-202ENST00000474281 VPS13BQ7Z7G8 4022 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 CCDC168Q8NDH2 2452 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 ITPR2Q14571 2701 aa0.06□□□□□ -2.4
PGK1-202ENST00000474281 FASNP49327 2511 aaKnown RBP0.06□□□□□ -2.4
PGK1-202ENST00000474281 NBEAL1Q6ZS30 2694 aa0.05□□□□□ -2.4
PGK1-202ENST00000474281 WDFY4Q6ZS81 3184 aa0.05□□□□□ -2.4
PGK1-202ENST00000474281 CFAP46Q8IYW2 2715 aa0.05□□□□□ -2.4
PGK1-202ENST00000474281 ANKRD36CQ5JPF3 1778 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms