RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 LINC00588Q9Y4M8 146 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 MUC2Q02817 5179 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 TRAV10A0A0B4J240 114 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 LECT2O14960 151 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 SLC25A20O43772 301 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 CRPP02741 224 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 CHTF8P0CG12 524 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 IFITM1P13164 125 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 PFN2P35080 140 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 CXCL5P42830 114 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 RPL28P46779 137 aaKnown RBP0.81□□□□□ -2.28
CCDC39-203ENST00000473854 PRR3P79522 188 aaKnown RBP0.81□□□□□ -2.28
CCDC39-203ENST00000473854 RPL18AQ02543 176 aaKnown RBP0.81□□□□□ -2.28
CCDC39-203ENST00000473854 ATXN8Q156A1 80 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 LYRM7Q5U5X0 104 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 Q6ZRN7 208 aaPredicted RBP0.81□□□□□ -2.28
CCDC39-203ENST00000473854 TEN1Q86WV5 123 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 SMIM11BQ8TCY0 68 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 SMCR5Q8TEV8 140 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 LINC01600Q96MT4 127 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 B9D2Q9BPU9 175 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 UPK3BQ9BT76 320 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 SND1-IT1Q9HBX3 110 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 XAGE1AQ9HD64 81 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 APLNQ9ULZ1 77 aa0.81□□□□□ -2.28
CCDC39-203ENST00000473854 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TRBV20-1A0A075B6N2 111 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TRAV23DV6A0A075B6W5 121 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TRAV13-2A0A0B4J235 113 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TRBV10-3A0A0K0K1G6 114 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TRBV10-2A0A0K0K1G8 114 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TEX49A0A1B0GTD5 131 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 A0A1B0GV72 72 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 F8W1H4 67 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 H3BT86 120 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 K7ERU9 68 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 M0QXV9 152 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 M0R2N4 97 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 NDUFC2O95298 119 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 IGLV6-57P01721 117 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TRACP01848 142 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 MT-ATP8P03928 68 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TLX1NBP0CAT3 122 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 FUSP35637 526 aaKnown RBP eCLIP0.8□□□□□ -2.28
CCDC39-203ENST00000473854 LINC00158P58513 81 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 CKS1BP61024 79 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 MOBPQ13875 183 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 CIRBPQ14011 172 aaKnown RBP0.8□□□□□ -2.28
CCDC39-203ENST00000473854 COX17Q14061 63 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 C6orf99Q4VX62 202 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 C6orf226Q5I0X4 101 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 TTC32Q5I0X7 151 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 C15orf53Q8NAA6 179 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 PPDPFLQ8WWR9 84 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 CAMK2N2Q96S95 79 aa0.8□□□□□ -2.28
CCDC39-203ENST00000473854 KLK5Q9Y337 293 aaPredicted RBP0.8□□□□□ -2.28
CCDC39-203ENST00000473854 DMBT1Q9UGM3 2413 aaPredicted RBP0.8□□□□□ -2.28
CCDC39-203ENST00000473854 A0A096LNI7 61 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 NBDYA0A0U1RRE5 68 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 A0A1W2PNN7 141 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 NDUFC2-KCTD14E9PQ53 114 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 SCGB1C2P0DMR2 95 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 ELOF1P60002 83 aaKnown RBP0.79□□□□□ -2.28
CCDC39-203ENST00000473854 SYCNQ0VAF6 134 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 DEFB121Q5J5C9 76 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 SDIM1Q6ZPB5 146 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 UBE2DNLQ8IWF7 75 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 OR13C6PQ8NH95 151 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 COPS9Q8WXC6 57 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 OBSCN-AS1Q96MR7 158 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 VPS25Q9BRG1 176 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 Q9BRP9 147 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 C14orf132Q9NPU4 83 aa0.79□□□□□ -2.28
CCDC39-203ENST00000473854 IGKV2-24A0A0C4DH68 120 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 TRBV7-6A0A0J9YX20 115 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 TRBV7-7A0A0K0K1E9 115 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 FAM240AA0A1B0GVK7 77 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 A0A1B0GX51 115 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 NUPR2A6NF83 97 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 H0YGX0 51 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 M0R378 163 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 ZNF73O43830 326 aaPredicted RBP0.78□□□□□ -2.28
CCDC39-203ENST00000473854 ERC2-IT1O76042 136 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 DNAL4O96015 105 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 COX6CP09669 75 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 BAALC-AS2P0C853 105 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 COX7BP24311 80 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 SPRR1AP35321 89 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 CNBPP62633 177 aaKnown RBP0.78□□□□□ -2.28
CCDC39-203ENST00000473854 KRTAP21-3Q3LHN1 58 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 S100A7L2Q5SY68 101 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 LINC00575Q6W349 94 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 Q6ZQY7 126 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 PHF5AQ7RTV0 110 aaKnown RBP0.78□□□□□ -2.28
CCDC39-203ENST00000473854 FAM19A5Q7Z5A7 132 aaPredicted RBP0.78□□□□□ -2.28
CCDC39-203ENST00000473854 MRPL55Q7Z7F7 128 aaKnown RBP0.78□□□□□ -2.28
CCDC39-203ENST00000473854 C3orf22Q8N5N4 141 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 Q8N814 137 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 ST20-AS1Q8NBB2 130 aa0.78□□□□□ -2.28
CCDC39-203ENST00000473854 MUC7Q8TAX7 377 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms