RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 SMIM29Q86T20 159 aa11.04□□□□□ -0.64
CTDSP1-207ENST00000473420 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
CTDSP1-207ENST00000473420 CLEC2BQ92478 149 aa11.01□□□□□ -0.65
CTDSP1-207ENST00000473420 BATFQ16520 125 aa11□□□□□ -0.65
CTDSP1-207ENST00000473420 GHRHP01286 108 aa10.99□□□□□ -0.65
CTDSP1-207ENST00000473420 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
CTDSP1-207ENST00000473420 SCGB1C2P0DMR2 95 aa10.98□□□□□ -0.65
CTDSP1-207ENST00000473420 DNAL4O96015 105 aa10.97□□□□□ -0.65
CTDSP1-207ENST00000473420 F8WEM9 126 aa10.96□□□□□ -0.65
CTDSP1-207ENST00000473420 SPINK1P00995 79 aa10.96□□□□□ -0.65
CTDSP1-207ENST00000473420 H3BQ85 93 aa10.94□□□□□ -0.66
CTDSP1-207ENST00000473420 LST1O00453 97 aa10.94□□□□□ -0.66
CTDSP1-207ENST00000473420 TRACP01848 142 aa10.94□□□□□ -0.66
CTDSP1-207ENST00000473420 RPS29P62273 56 aaKnown RBP10.94□□□□□ -0.66
CTDSP1-207ENST00000473420 SNHG12Q9BXW3 62 aa10.94□□□□□ -0.66
CTDSP1-207ENST00000473420 IGLV8-61A0A075B6I0 122 aa10.92□□□□□ -0.66
CTDSP1-207ENST00000473420 ORMDL1Q9P0S3 153 aa10.92□□□□□ -0.66
CTDSP1-207ENST00000473420 LYRM7Q5U5X0 104 aa10.91□□□□□ -0.66
CTDSP1-207ENST00000473420 NAA38Q9BRA0 125 aaKnown RBP10.91□□□□□ -0.66
CTDSP1-207ENST00000473420 CD164Q04900 197 aa10.9□□□□□ -0.66
CTDSP1-207ENST00000473420 Q6JHZ5 121 aa10.89□□□□□ -0.67
CTDSP1-207ENST00000473420 TAX1BP3O14907 124 aa10.88□□□□□ -0.67
CTDSP1-207ENST00000473420 C9orf118A6NHY6 69 aa10.87□□□□□ -0.67
CTDSP1-207ENST00000473420 H3BUT2 72 aa10.87□□□□□ -0.67
CTDSP1-207ENST00000473420 NDUFV3P56181 108 aaKnown RBP10.87□□□□□ -0.67
CTDSP1-207ENST00000473420 ATXN8Q156A1 80 aa10.87□□□□□ -0.67
CTDSP1-207ENST00000473420 HMCN2Q8NDA2 5059 aa10.87□□□□□ -0.67
CTDSP1-207ENST00000473420 TMEM256-PLSCR3K7ERE1 68 aa10.86□□□□□ -0.67
CTDSP1-207ENST00000473420 TCL1BO95988 128 aa10.86□□□□□ -0.67
CTDSP1-207ENST00000473420 FABP2P12104 132 aa10.86□□□□□ -0.67
CTDSP1-207ENST00000473420 TRBV20-1A0A075B6N2 111 aa10.84□□□□□ -0.67
CTDSP1-207ENST00000473420 LIMD2Q9BT23 127 aa10.83□□□□□ -0.68
CTDSP1-207ENST00000473420 PCP4L1A6NKN8 68 aa10.82□□□□□ -0.68
CTDSP1-207ENST00000473420 COL5A1-AS1Q5SY13 56 aa10.82□□□□□ -0.68
CTDSP1-207ENST00000473420 IGFL1Q6UW32 110 aa10.82□□□□□ -0.68
CTDSP1-207ENST00000473420 HRCT1Q6UXD1 115 aa10.82□□□□□ -0.68
CTDSP1-207ENST00000473420 UBE2V1Q13404 147 aa10.81□□□□□ -0.68
CTDSP1-207ENST00000473420 PRR4Q16378 134 aa10.81□□□□□ -0.68
CTDSP1-207ENST00000473420 A0A0G2JQZ4 141 aa10.8□□□□□ -0.68
CTDSP1-207ENST00000473420 A0A1W2PPM0 123 aa10.8□□□□□ -0.68
CTDSP1-207ENST00000473420 H3BMG7 143 aa10.8□□□□□ -0.68
CTDSP1-207ENST00000473420 RETNLBQ9BQ08 111 aa10.8□□□□□ -0.68
CTDSP1-207ENST00000473420 Q5XG85 94 aa10.78□□□□□ -0.68
CTDSP1-207ENST00000473420 FP248Q71RG6 208 aaPredicted RBP10.77□□□□□ -0.69
CTDSP1-207ENST00000473420 BAALC-AS2P0C853 105 aa10.76□□□□□ -0.69
CTDSP1-207ENST00000473420 Q6Q795 121 aa10.74□□□□□ -0.69
CTDSP1-207ENST00000473420 TRBV7-7A0A0K0K1E9 115 aa10.73□□□□□ -0.69
CTDSP1-207ENST00000473420 ANKRD29Q8N6D5 301 aa10.73□□□□□ -0.69
CTDSP1-207ENST00000473420 TEN1Q86WV5 123 aa10.71□□□□□ -0.69
CTDSP1-207ENST00000473420 IGLV7-46A0A075B6I9 117 aa10.7□□□□□ -0.7
CTDSP1-207ENST00000473420 C9JAW5 83 aa10.7□□□□□ -0.7
CTDSP1-207ENST00000473420 RBM3P98179 157 aaKnown RBP10.68□□□□□ -0.7
CTDSP1-207ENST00000473420 ASB16-AS1Q495Z4 193 aa10.68□□□□□ -0.7
CTDSP1-207ENST00000473420 SPCS1Q9Y6A9 102 aa10.68□□□□□ -0.7
CTDSP1-207ENST00000473420 A0A1B0GV72 72 aa10.67□□□□□ -0.7
CTDSP1-207ENST00000473420 TPRXLQ17RH7 258 aa10.67□□□□□ -0.7
CTDSP1-207ENST00000473420 TRBV7-4A0A0J9YYF1 115 aa10.66□□□□□ -0.7
CTDSP1-207ENST00000473420 JMJD7-PLA2G4BH0Y9G9 81 aa10.65□□□□□ -0.7
CTDSP1-207ENST00000473420 H3BT86 120 aa10.65□□□□□ -0.7
CTDSP1-207ENST00000473420 A0A1W2PNM2 257 aa10.64□□□□□ -0.71
CTDSP1-207ENST00000473420 DSCR8Q96T75 97 aa10.64□□□□□ -0.71
CTDSP1-207ENST00000473420 SS18L2Q9UHA2 77 aa10.64□□□□□ -0.71
CTDSP1-207ENST00000473420 C1orf195Q5TG92 126 aa10.63□□□□□ -0.71
CTDSP1-207ENST00000473420 LRP2P98164 4655 aa10.61□□□□□ -0.71
CTDSP1-207ENST00000473420 CCKP06307 115 aa10.61□□□□□ -0.71
CTDSP1-207ENST00000473420 K7EP34 96 aa10.6□□□□□ -0.71
CTDSP1-207ENST00000473420 A0A087WSZ3 146 aa10.59□□□□□ -0.71
CTDSP1-207ENST00000473420 LPAP08519 4548 aa10.59□□□□□ -0.71
CTDSP1-207ENST00000473420 KRTAP13-3Q3SY46 172 aa10.58□□□□□ -0.72
CTDSP1-207ENST00000473420 OBSCN-AS1Q96MR7 158 aa10.58□□□□□ -0.72
CTDSP1-207ENST00000473420 MTURNQ8N3F0 131 aa10.57□□□□□ -0.72
CTDSP1-207ENST00000473420 LOC110117498A0A087WWA1 95 aa10.56□□□□□ -0.72
CTDSP1-207ENST00000473420 PDE6GP18545 87 aa10.56□□□□□ -0.72
CTDSP1-207ENST00000473420 C21orf62-AS1Q17RA5 79 aa10.54□□□□□ -0.72
CTDSP1-207ENST00000473420 Q6ZQT0 140 aa10.54□□□□□ -0.72
CTDSP1-207ENST00000473420 GTF2H5Q6ZYL4 71 aa10.54□□□□□ -0.72
CTDSP1-207ENST00000473420 CDIP1Q9H305 208 aa10.54□□□□□ -0.72
CTDSP1-207ENST00000473420 VPS25Q9BRG1 176 aa10.53□□□□□ -0.72
CTDSP1-207ENST00000473420 C14orf132Q9NPU4 83 aa10.52□□□□□ -0.73
CTDSP1-207ENST00000473420 A0A1B0GW54 56 aa10.51□□□□□ -0.73
CTDSP1-207ENST00000473420 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
CTDSP1-207ENST00000473420 PRO0461Q9UI25 63 aa10.5□□□□□ -0.73
CTDSP1-207ENST00000473420 Q96NJ1 140 aa10.48□□□□□ -0.73
CTDSP1-207ENST00000473420 UBR4Q5T4S7 5183 aa10.46□□□□□ -0.74
CTDSP1-207ENST00000473420 F8W1H4 67 aa10.43□□□□□ -0.74
CTDSP1-207ENST00000473420 LINC00472Q9H8W2 130 aa10.42□□□□□ -0.74
CTDSP1-207ENST00000473420 C9orf92A6NGG3 77 aa10.41□□□□□ -0.74
CTDSP1-207ENST00000473420 XP32Q5T750 250 aa10.41□□□□□ -0.74
CTDSP1-207ENST00000473420 IGKV4-1P06312 121 aa10.37□□□□□ -0.75
CTDSP1-207ENST00000473420 SIGMAR1Q99720 223 aa10.37□□□□□ -0.75
CTDSP1-207ENST00000473420 J3KT08 172 aa10.34□□□□□ -0.75
CTDSP1-207ENST00000473420 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
CTDSP1-207ENST00000473420 SEC61BP60468 96 aaKnown RBP10.3□□□□□ -0.76
CTDSP1-207ENST00000473420 NREPQ16612 68 aa10.3□□□□□ -0.76
CTDSP1-207ENST00000473420 ETDBQ3ZM63 59 aa10.29□□□□□ -0.76
CTDSP1-207ENST00000473420 MUC17Q685J3 4493 aa10.28□□□□□ -0.76
CTDSP1-207ENST00000473420 A0A1B0GV90 55 aa10.27□□□□□ -0.77
CTDSP1-207ENST00000473420 RPL37P61927 97 aaKnown RBP10.25□□□□□ -0.77
CTDSP1-207ENST00000473420 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
CTDSP1-207ENST00000473420 LINC00313P59037 77 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms