RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 NDUFB1O75438 58 aa8.97□□□□□ -0.97
NHLRC3-204ENST00000473371 RPL37AP61513 92 aaKnown RBP8.97□□□□□ -0.97
NHLRC3-204ENST00000473371 BAHCC1Q9P281 2608 aa8.97□□□□□ -0.97
NHLRC3-204ENST00000473371 ANK2Q01484 3957 aa8.97□□□□□ -0.97
NHLRC3-204ENST00000473371 C1orf195Q5TG92 126 aa8.96□□□□□ -0.98
NHLRC3-204ENST00000473371 A0A096LNI7 61 aa8.95□□□□□ -0.98
NHLRC3-204ENST00000473371 UBE2AP49459 152 aa8.95□□□□□ -0.98
NHLRC3-204ENST00000473371 PRB2P02812 416 aaPredicted RBP8.95□□□□□ -0.98
NHLRC3-204ENST00000473371 IGLV8-61A0A075B6I0 122 aa8.94□□□□□ -0.98
NHLRC3-204ENST00000473371 LINC00208Q96KT6 92 aa8.94□□□□□ -0.98
NHLRC3-204ENST00000473371 DNAH1Q9P2D7 4330 aa8.93□□□□□ -0.98
NHLRC3-204ENST00000473371 TRAV22A0A0B4J277 110 aa8.93□□□□□ -0.98
NHLRC3-204ENST00000473371 C16orf90A8MZG2 172 aa8.92□□□□□ -0.98
NHLRC3-204ENST00000473371 PSPHP1O15172 72 aa8.92□□□□□ -0.98
NHLRC3-204ENST00000473371 CASC2Q6XLA1 102 aa8.9□□□□□ -0.98
NHLRC3-204ENST00000473371 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
NHLRC3-204ENST00000473371 H0Y9P7 68 aa8.9□□□□□ -0.99
NHLRC3-204ENST00000473371 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
NHLRC3-204ENST00000473371 MAST4O15021 2626 aa8.89□□□□□ -0.99
NHLRC3-204ENST00000473371 KRTAP24-1Q3LI83 254 aa8.88□□□□□ -0.99
NHLRC3-204ENST00000473371 STAB1Q9NY15 2570 aa8.88□□□□□ -0.99
NHLRC3-204ENST00000473371 PRR15Q8IV56 129 aa8.88□□□□□ -0.99
NHLRC3-204ENST00000473371 NOTCH1P46531 2555 aa8.87□□□□□ -0.99
NHLRC3-204ENST00000473371 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
NHLRC3-204ENST00000473371 PHF5AQ7RTV0 110 aaKnown RBP8.86□□□□□ -0.99
NHLRC3-204ENST00000473371 A8MWP4 228 aa8.85□□□□□ -0.99
NHLRC3-204ENST00000473371 KRTAP11-1Q8IUC1 163 aa8.84□□□□□ -0.99
NHLRC3-204ENST00000473371 KRTAP1-5Q9BYS1 174 aa8.84□□□□□ -0.99
NHLRC3-204ENST00000473371 H3BPC8 53 aa8.84□□□□□ -0.99
NHLRC3-204ENST00000473371 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
NHLRC3-204ENST00000473371 A8MUN3 132 aa8.83□□□□□ -1
NHLRC3-204ENST00000473371 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
NHLRC3-204ENST00000473371 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
NHLRC3-204ENST00000473371 SPRR1BP22528 89 aa8.82□□□□□ -1
NHLRC3-204ENST00000473371 H0Y9J4 135 aa8.81□□□□□ -1
NHLRC3-204ENST00000473371 DNAH10Q8IVF4 4471 aa8.79□□□□□ -1
NHLRC3-204ENST00000473371 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
NHLRC3-204ENST00000473371 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1
NHLRC3-204ENST00000473371 C14orf177Q52M58 125 aa8.77□□□□□ -1.01
NHLRC3-204ENST00000473371 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1.01
NHLRC3-204ENST00000473371 HUWE1Q7Z6Z7 4374 aaKnown RBP8.76□□□□□ -1.01
NHLRC3-204ENST00000473371 K7EIL1 84 aa8.76□□□□□ -1.01
NHLRC3-204ENST00000473371 Q5VV11 94 aa8.76□□□□□ -1.01
NHLRC3-204ENST00000473371 C9orf163Q8N9P6 203 aa8.76□□□□□ -1.01
NHLRC3-204ENST00000473371 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
NHLRC3-204ENST00000473371 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
NHLRC3-204ENST00000473371 COL6A5A8TX70 2615 aa8.75□□□□□ -1.01
NHLRC3-204ENST00000473371 FBN1P35555 2871 aaKnown RBP8.75□□□□□ -1.01
NHLRC3-204ENST00000473371 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
NHLRC3-204ENST00000473371 PMAIP1Q13794 54 aa8.72□□□□□ -1.01
NHLRC3-204ENST00000473371 PRR15LQ9BU68 103 aa8.72□□□□□ -1.01
NHLRC3-204ENST00000473371 H3BS24 57 aa8.72□□□□□ -1.01
NHLRC3-204ENST00000473371 CHKB-CPT1BH3BT56 60 aa8.72□□□□□ -1.01
NHLRC3-204ENST00000473371 COA5Q86WW8 74 aa8.7□□□□□ -1.02
NHLRC3-204ENST00000473371 IGLV9-49A0A0B4J1Y8 123 aa8.69□□□□□ -1.02
NHLRC3-204ENST00000473371 A8MU10 97 aa8.69□□□□□ -1.02
NHLRC3-204ENST00000473371 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
NHLRC3-204ENST00000473371 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
NHLRC3-204ENST00000473371 DNAH9Q9NYC9 4486 aa8.68□□□□□ -1.02
NHLRC3-204ENST00000473371 PANO1I0J062 215 aa8.66□□□□□ -1.02
NHLRC3-204ENST00000473371 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
NHLRC3-204ENST00000473371 APLNQ9ULZ1 77 aa8.66□□□□□ -1.02
NHLRC3-204ENST00000473371 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
NHLRC3-204ENST00000473371 Q96NJ1 140 aa8.65□□□□□ -1.02
NHLRC3-204ENST00000473371 MOBPQ13875 183 aa8.65□□□□□ -1.02
NHLRC3-204ENST00000473371 LYSTQ99698 3801 aa8.65□□□□□ -1.03
NHLRC3-204ENST00000473371 C8orf17Q9NRJ1 99 aa8.64□□□□□ -1.03
NHLRC3-204ENST00000473371 NDUFS5O43920 106 aa8.63□□□□□ -1.03
NHLRC3-204ENST00000473371 CD164Q04900 197 aa8.63□□□□□ -1.03
NHLRC3-204ENST00000473371 STAB2Q8WWQ8 2551 aa8.63□□□□□ -1.03
NHLRC3-204ENST00000473371 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
NHLRC3-204ENST00000473371 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
NHLRC3-204ENST00000473371 Q75L30 129 aa8.61□□□□□ -1.03
NHLRC3-204ENST00000473371 A6NED7 52 aa8.6□□□□□ -1.03
NHLRC3-204ENST00000473371 TENM2Q9NT68 2774 aa8.6□□□□□ -1.03
NHLRC3-204ENST00000473371 DYNC2H1Q8NCM8 4307 aaKnown RBP8.6□□□□□ -1.03
NHLRC3-204ENST00000473371 CDK2AP2O75956 126 aa8.59□□□□□ -1.03
NHLRC3-204ENST00000473371 LOC101927531A0A1B0GV80 90 aa8.59□□□□□ -1.03
NHLRC3-204ENST00000473371 Q6ZR54 194 aa8.59□□□□□ -1.03
NHLRC3-204ENST00000473371 SPTSSBQ8NFR3 76 aa8.59□□□□□ -1.03
NHLRC3-204ENST00000473371 CSMD3Q7Z407 3707 aa8.58□□□□□ -1.04
NHLRC3-204ENST00000473371 NBDYA0A0U1RRE5 68 aa8.58□□□□□ -1.04
NHLRC3-204ENST00000473371 A0A1B0GVX0 72 aa8.58□□□□□ -1.04
NHLRC3-204ENST00000473371 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.58□□□□□ -1.04
NHLRC3-204ENST00000473371 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
NHLRC3-204ENST00000473371 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
NHLRC3-204ENST00000473371 LCA10Q71F78 164 aa8.56□□□□□ -1.04
NHLRC3-204ENST00000473371 MGAM2Q2M2H8 2515 aa8.56□□□□□ -1.04
NHLRC3-204ENST00000473371 SPACA4Q8TDM5 124 aa8.56□□□□□ -1.04
NHLRC3-204ENST00000473371 MRPL34Q9BQ48 92 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-204ENST00000473371 ZNF706Q9Y5V0 76 aaPredicted RBP8.55□□□□□ -1.04
NHLRC3-204ENST00000473371 Q6ZRN7 208 aaPredicted RBP8.54□□□□□ -1.04
NHLRC3-204ENST00000473371 WWC2-AS2Q96NR7 200 aa8.53□□□□□ -1.04
NHLRC3-204ENST00000473371 LINC01558Q9Y6Z2 57 aa8.52□□□□□ -1.04
NHLRC3-204ENST00000473371 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.05
NHLRC3-204ENST00000473371 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.05
NHLRC3-204ENST00000473371 HRES1P13985 223 aa8.51□□□□□ -1.05
NHLRC3-204ENST00000473371 MDFIQ99750 246 aa8.51□□□□□ -1.05
NHLRC3-204ENST00000473371 COL7A1Q02388 2944 aa8.51□□□□□ -1.05
NHLRC3-204ENST00000473371 A0A087X002 238 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms