RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 HSD52Q0P140 79 aa9.07□□□□□ -0.96
USP40-212ENST00000473191 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
USP40-212ENST00000473191 KRTAP19-2Q3LHN2 52 aa9.06□□□□□ -0.96
USP40-212ENST00000473191 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
USP40-212ENST00000473191 PCOTHQ58A44 107 aa9.05□□□□□ -0.96
USP40-212ENST00000473191 Q6ZVH6 145 aa9.05□□□□□ -0.96
USP40-212ENST00000473191 M0R143 59 aa9.04□□□□□ -0.96
USP40-212ENST00000473191 CD164Q04900 197 aa9.04□□□□□ -0.96
USP40-212ENST00000473191 C1orf195Q5TG92 126 aa9.02□□□□□ -0.97
USP40-212ENST00000473191 TRAV13-2A0A0B4J235 113 aa9.01□□□□□ -0.97
USP40-212ENST00000473191 TMEM238LA0A1B0GVL6 79 aa9.01□□□□□ -0.97
USP40-212ENST00000473191 A6NJY4 79 aa9.01□□□□□ -0.97
USP40-212ENST00000473191 CEND1Q8N111 149 aa9.01□□□□□ -0.97
USP40-212ENST00000473191 BATFQ16520 125 aa9□□□□□ -0.97
USP40-212ENST00000473191 IGLV8-61A0A075B6I0 122 aa8.99□□□□□ -0.97
USP40-212ENST00000473191 Q5XG85 94 aa8.99□□□□□ -0.97
USP40-212ENST00000473191 KRTAP9-6A0A140TA67 174 aa8.98□□□□□ -0.97
USP40-212ENST00000473191 A4D1N5 150 aa8.98□□□□□ -0.97
USP40-212ENST00000473191 BVES-AS1Q5T3Y7 98 aa8.97□□□□□ -0.97
USP40-212ENST00000473191 FXYD2P54710 66 aa8.96□□□□□ -0.98
USP40-212ENST00000473191 LINC00575Q6W349 94 aa8.96□□□□□ -0.98
USP40-212ENST00000473191 MT1HP80294 61 aa8.94□□□□□ -0.98
USP40-212ENST00000473191 NHP2Q9NX24 153 aaKnown RBP8.94□□□□□ -0.98
USP40-212ENST00000473191 Q6ZQY7 126 aa8.93□□□□□ -0.98
USP40-212ENST00000473191 RAB37Q96AX2 223 aa8.92□□□□□ -0.98
USP40-212ENST00000473191 SNHG12Q9BXW3 62 aa8.92□□□□□ -0.98
USP40-212ENST00000473191 hADV29S1A0JD25 119 aa8.9□□□□□ -0.98
USP40-212ENST00000473191 A0A0B4J2C4 111 aa8.89□□□□□ -0.99
USP40-212ENST00000473191 RPL37P61927 97 aaKnown RBP8.89□□□□□ -0.99
USP40-212ENST00000473191 VAMP3Q15836 100 aa8.89□□□□□ -0.99
USP40-212ENST00000473191 IGFL1Q6UW32 110 aa8.89□□□□□ -0.99
USP40-212ENST00000473191 K7ERJ3 54 aa8.88□□□□□ -0.99
USP40-212ENST00000473191 CFC1BP0CG36 223 aa8.88□□□□□ -0.99
USP40-212ENST00000473191 CFC1P0CG37 223 aa8.88□□□□□ -0.99
USP40-212ENST00000473191 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
USP40-212ENST00000473191 COL5A1-AS1Q5SY13 56 aa8.87□□□□□ -0.99
USP40-212ENST00000473191 F8WEM9 126 aa8.86□□□□□ -0.99
USP40-212ENST00000473191 PRO1854Q9UHT4 67 aa8.86□□□□□ -0.99
USP40-212ENST00000473191 TRBV7-7A0A0K0K1E9 115 aa8.84□□□□□ -0.99
USP40-212ENST00000473191 TCL1BO95988 128 aa8.84□□□□□ -0.99
USP40-212ENST00000473191 CLEC2BQ92478 149 aa8.84□□□□□ -0.99
USP40-212ENST00000473191 OCIAD2Q56VL3 154 aa8.83□□□□□ -1
USP40-212ENST00000473191 H3BUT2 72 aa8.82□□□□□ -1
USP40-212ENST00000473191 FSIP2Q5CZC0 6907 aa8.82□□□□□ -1
USP40-212ENST00000473191 Q6JHZ5 121 aa8.81□□□□□ -1
USP40-212ENST00000473191 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.81□□□□□ -1
USP40-212ENST00000473191 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
USP40-212ENST00000473191 PSMB2P49721 201 aa8.79□□□□□ -1
USP40-212ENST00000473191 FAM218AQ96MZ4 157 aa8.79□□□□□ -1
USP40-212ENST00000473191 TAX1BP3O14907 124 aa8.78□□□□□ -1
USP40-212ENST00000473191 LORP23490 312 aaPredicted RBP8.78□□□□□ -1
USP40-212ENST00000473191 KRTAP10-6P60371 365 aaPredicted RBP8.77□□□□□ -1.01
USP40-212ENST00000473191 C9orf118A6NHY6 69 aa8.76□□□□□ -1.01
USP40-212ENST00000473191 OBSCN-AS1Q96MR7 158 aa8.76□□□□□ -1.01
USP40-212ENST00000473191 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
USP40-212ENST00000473191 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
USP40-212ENST00000473191 COX6CP09669 75 aa8.74□□□□□ -1.01
USP40-212ENST00000473191 PPDPFLQ8WWR9 84 aa8.73□□□□□ -1.01
USP40-212ENST00000473191 TRIAP1O43715 76 aa8.72□□□□□ -1.01
USP40-212ENST00000473191 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
USP40-212ENST00000473191 CRCT1Q9UGL9 99 aa8.72□□□□□ -1.01
USP40-212ENST00000473191 FABP2P12104 132 aa8.71□□□□□ -1.02
USP40-212ENST00000473191 A0A1W2PPM0 123 aa8.7□□□□□ -1.02
USP40-212ENST00000473191 LST1O00453 97 aa8.69□□□□□ -1.02
USP40-212ENST00000473191 COX6B2Q6YFQ2 88 aa8.69□□□□□ -1.02
USP40-212ENST00000473191 Q75L30 129 aa8.69□□□□□ -1.02
USP40-212ENST00000473191 M0R2T5 61 aa8.68□□□□□ -1.02
USP40-212ENST00000473191 NDUFV3P56181 108 aaKnown RBP8.68□□□□□ -1.02
USP40-212ENST00000473191 H0YGX0 51 aa8.66□□□□□ -1.02
USP40-212ENST00000473191 Q96NJ1 140 aa8.66□□□□□ -1.02
USP40-212ENST00000473191 Q6Q795 121 aa8.65□□□□□ -1.02
USP40-212ENST00000473191 SPCS1Q9Y6A9 102 aa8.65□□□□□ -1.02
USP40-212ENST00000473191 TRBV20-1A0A075B6N2 111 aa8.64□□□□□ -1.03
USP40-212ENST00000473191 A0A087WSZ3 146 aa8.64□□□□□ -1.03
USP40-212ENST00000473191 A0A1B0GV90 55 aa8.64□□□□□ -1.03
USP40-212ENST00000473191 SNCGO76070 127 aa8.64□□□□□ -1.03
USP40-212ENST00000473191 ATP11AUNQ6ZP68 121 aa8.64□□□□□ -1.03
USP40-212ENST00000473191 TEN1Q86WV5 123 aa8.64□□□□□ -1.03
USP40-212ENST00000473191 ATXN8Q156A1 80 aa8.63□□□□□ -1.03
USP40-212ENST00000473191 GTF2H5Q6ZYL4 71 aa8.62□□□□□ -1.03
USP40-212ENST00000473191 A0A1W2PNM2 257 aa8.61□□□□□ -1.03
USP40-212ENST00000473191 H3BMG7 143 aa8.61□□□□□ -1.03
USP40-212ENST00000473191 K7EP34 96 aa8.61□□□□□ -1.03
USP40-212ENST00000473191 DNAL4O96015 105 aa8.6□□□□□ -1.03
USP40-212ENST00000473191 C20orf166-AS1Q96NR2 134 aa8.6□□□□□ -1.03
USP40-212ENST00000473191 A0A1B0GV72 72 aa8.59□□□□□ -1.03
USP40-212ENST00000473191 SS18L2Q9UHA2 77 aa8.59□□□□□ -1.03
USP40-212ENST00000473191 A0A1B0GX51 115 aa8.58□□□□□ -1.04
USP40-212ENST00000473191 DSCR10P59022 87 aa8.58□□□□□ -1.04
USP40-212ENST00000473191 A8MUU9 505 aa8.57□□□□□ -1.04
USP40-212ENST00000473191 TRACP01848 142 aa8.56□□□□□ -1.04
USP40-212ENST00000473191 KRTAP16-1A8MUX0 517 aa8.54□□□□□ -1.04
USP40-212ENST00000473191 C9JAW5 83 aa8.53□□□□□ -1.04
USP40-212ENST00000473191 GHRHP01286 108 aa8.51□□□□□ -1.05
USP40-212ENST00000473191 UBE2V1Q13404 147 aa8.51□□□□□ -1.05
USP40-212ENST00000473191 NOTCH2NLQ7Z3S9 236 aa8.51□□□□□ -1.05
USP40-212ENST00000473191 SIGMAR1Q99720 223 aa8.51□□□□□ -1.05
USP40-212ENST00000473191 ORMDL1Q9P0S3 153 aa8.51□□□□□ -1.05
USP40-212ENST00000473191 DEFB116Q30KQ4 102 aa8.5□□□□□ -1.05
USP40-212ENST00000473191 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms