RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 DEFB109BQ30KR1 87 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 PIGYQ3MUY2 71 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 ETDBQ3ZM63 59 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 SPAG11AQ6PDA7 123 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 HEPN1Q6WQI6 88 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 SPTSSBQ8NFR3 76 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 S100A16Q96FQ6 103 aaKnown RBP0.09□□□□□ -2.4
PTCD3-209ENST00000472044 SNHG12Q9BXW3 62 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 SMIM3Q9BZL3 60 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 KCNQ1DNQ9H478 68 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 NOP10Q9NPE3 64 aaKnown RBP0.09□□□□□ -2.4
PTCD3-209ENST00000472044 MANBALQ9NQG1 85 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 CMC2Q9NRP2 79 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 TMEM167BQ9NRX6 74 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 PSENENQ9NZ42 101 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 ABCA8O94911 1581 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 ADAMTS12P58397 1594 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 ARHGEF5Q12774 1597 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 CDC42BPGQ6DT37 1551 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 SAMD9LQ8IVG5 1584 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 ITSN1Q15811 1721 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 DOCK1Q14185 1865 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 FAT3Q8TDW7 4589 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 TOP2BQ02880 1626 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 TARBP1Q13395 1621 aaKnown RBP0.09□□□□□ -2.4
PTCD3-209ENST00000472044 ABCA9Q8IUA7 1624 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 MYO3AQ8NEV4 1616 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 ABCA5Q8WWZ7 1642 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 CICQ96RK0 1608 aaPredicted RBP0.09□□□□□ -2.4
PTCD3-209ENST00000472044 RGPD3A6NKT7 1758 aaPredicted RBP0.09□□□□□ -2.4
PTCD3-209ENST00000472044 BCORQ6W2J9 1755 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 RGPD4Q7Z3J3 1758 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 MYH7P12883 1935 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 MYH8P13535 1937 aa0.09□□□□□ -2.4
PTCD3-209ENST00000472044 BTAF1O14981 1849 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 TSC2P49815 1807 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PSME4Q14997 1843 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 DOCK2Q92608 1830 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 WNK3Q9BYP7 1800 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 TET3O43151 1660 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 CLTCQ00610 1675 aaKnown RBP0.08□□□□□ -2.4
PTCD3-209ENST00000472044 COL4A6Q14031 1691 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PPRC1Q5VV67 1664 aaKnown RBP0.08□□□□□ -2.4
PTCD3-209ENST00000472044 TOP2AP11388 1531 aaKnown RBP0.08□□□□□ -2.4
PTCD3-209ENST00000472044 AGLP35573 1532 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 NEXMIFQ5QGS0 1516 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ZMYM4Q5VZL5 1548 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ASXL1Q8IXJ9 1541 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 KMT2DO14686 5537 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 CHD1O14646 1710 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PHLPP1O60346 1717 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 C4AP0C0L4 1744 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 RGPD1P0DJD0 1748 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 RICTORQ6R327 1708 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 KNDC1Q76NI1 1749 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 TIAM2Q8IVF5 1701 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 XRN1Q8IZH2 1706 aaKnown RBP0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ABCA3Q99758 1704 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ANKRD26Q9UPS8 1709 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 GLI2P10070 1586 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 UGGT1Q9NYU2 1555 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 DIP2BQ9P265 1576 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 APOBP04114 4563 aaKnown RBP0.08□□□□□ -2.4
PTCD3-209ENST00000472044 A0A087WTM6 91 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 TRAV21A0A0B4J279 112 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 FAM236AA0A1B0GUQ0 79 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 FAM236BA0A1B0GV22 79 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ETDCA0A1B0GVM5 59 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 A0A1B0GWA3 101 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 CRYM-AS1A6NIL9 109 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 OOSP1A8MZH6 123 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 C10orf142B7Z368 130 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 D6R8Y8 96 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 F8WEM9 126 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 H0Y9P7 68 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 H0YAA0 97 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 I3L2K1 104 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 M0QZ58 72 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 HMGN4O00479 90 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 GNG7O60262 68 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 COX6B1P14854 86 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 COX7BP24311 80 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PLNP26678 52 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 GCHFRP30047 84 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB131AP59861 70 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 RBM3P98179 157 aaKnown RBP0.08□□□□□ -2.4
PTCD3-209ENST00000472044 COX6A2Q02221 97 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ATXN8Q156A1 80 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 C10orf128Q5T292 105 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 WFDC13Q8IUB5 93 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 MUSTN1Q8IVN3 82 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 Q8IZM0 81 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 C20orf197Q8N268 126 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 Q96NJ1 140 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 UBL5Q9BZL1 73 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 CRIPTQ9P021 101 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 CDKN2A-AS1Q9UH64 79 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 Q9Y3F1 56 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PLECQ15149 4684 aaKnown RBP0.08□□□□□ -2.4
PTCD3-209ENST00000472044 MUC22E2RYF6 1773 aaPredicted RBP0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms