RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
HMGN1-211ENST00000471260 UBR4Q5T4S7 5183 aa8.17□□□□□ -1.1
HMGN1-211ENST00000471260 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
HMGN1-211ENST00000471260 XAGE1AQ9HD64 81 aa8.16□□□□□ -1.1
HMGN1-211ENST00000471260 TRBV7-6A0A0J9YX20 115 aa8.14□□□□□ -1.11
HMGN1-211ENST00000471260 FAM236AA0A1B0GUQ0 79 aa8.14□□□□□ -1.11
HMGN1-211ENST00000471260 FAM236BA0A1B0GV22 79 aa8.14□□□□□ -1.11
HMGN1-211ENST00000471260 ZNF861PO60384 105 aa8.14□□□□□ -1.11
HMGN1-211ENST00000471260 IGLV6-57P01721 117 aa8.14□□□□□ -1.11
HMGN1-211ENST00000471260 MRPL55Q7Z7F7 128 aaKnown RBP8.14□□□□□ -1.11
HMGN1-211ENST00000471260 ATOX1O00244 68 aa8.13□□□□□ -1.11
HMGN1-211ENST00000471260 CCKP06307 115 aa8.13□□□□□ -1.11
HMGN1-211ENST00000471260 KRTAP1-4P0C5Y4 121 aa8.13□□□□□ -1.11
HMGN1-211ENST00000471260 PRR26Q8N8Z3 221 aa8.13□□□□□ -1.11
HMGN1-211ENST00000471260 C14orf132Q9NPU4 83 aa8.13□□□□□ -1.11
HMGN1-211ENST00000471260 LRP2P98164 4655 aa8.12□□□□□ -1.11
HMGN1-211ENST00000471260 HIST1H4AP62805 103 aaKnown RBP8.12□□□□□ -1.11
HMGN1-211ENST00000471260 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
HMGN1-211ENST00000471260 PDE6GP18545 87 aa8.11□□□□□ -1.11
HMGN1-211ENST00000471260 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
HMGN1-211ENST00000471260 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
HMGN1-211ENST00000471260 LOC110117498A0A087WWA1 95 aa8.1□□□□□ -1.11
HMGN1-211ENST00000471260 NCR3O14931 201 aa8.1□□□□□ -1.11
HMGN1-211ENST00000471260 BCE1O60756 84 aa8.09□□□□□ -1.11
HMGN1-211ENST00000471260 TRBV10-3A0A0K0K1G6 114 aa8.08□□□□□ -1.12
HMGN1-211ENST00000471260 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
HMGN1-211ENST00000471260 UQCRQO14949 82 aa8.08□□□□□ -1.12
HMGN1-211ENST00000471260 TRAV23DV6A0A075B6W5 121 aa8.07□□□□□ -1.12
HMGN1-211ENST00000471260 CCDC179H3BU77 68 aa8.07□□□□□ -1.12
HMGN1-211ENST00000471260 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-211ENST00000471260 LINC00846Q9NV44 126 aa8.07□□□□□ -1.12
HMGN1-211ENST00000471260 B5MCH6 92 aa8.06□□□□□ -1.12
HMGN1-211ENST00000471260 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
HMGN1-211ENST00000471260 RPL37AP8A6NKH3 93 aa8.05□□□□□ -1.12
HMGN1-211ENST00000471260 C3orf22Q8N5N4 141 aa8.05□□□□□ -1.12
HMGN1-211ENST00000471260 Q8NDZ9 215 aa8.05□□□□□ -1.12
HMGN1-211ENST00000471260 M0R378 163 aa8.04□□□□□ -1.12
HMGN1-211ENST00000471260 UBL5Q9BZL1 73 aa8.04□□□□□ -1.12
HMGN1-211ENST00000471260 VPREB1P12018 145 aa8.03□□□□□ -1.12
HMGN1-211ENST00000471260 COX7CP15954 63 aa8.03□□□□□ -1.12
HMGN1-211ENST00000471260 ELOF1P60002 83 aaKnown RBP8.03□□□□□ -1.12
HMGN1-211ENST00000471260 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
HMGN1-211ENST00000471260 ZNF73O43830 326 aaPredicted RBP8.02□□□□□ -1.13
HMGN1-211ENST00000471260 COX7BP24311 80 aa8.02□□□□□ -1.13
HMGN1-211ENST00000471260 Q6ZQT0 140 aa8.02□□□□□ -1.13
HMGN1-211ENST00000471260 UBE2AP49459 152 aa8.01□□□□□ -1.13
HMGN1-211ENST00000471260 LCE2BO14633 110 aa8□□□□□ -1.13
HMGN1-211ENST00000471260 CRYGAP11844 174 aa8□□□□□ -1.13
HMGN1-211ENST00000471260 C9orf153Q5TBE3 101 aa8□□□□□ -1.13
HMGN1-211ENST00000471260 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
HMGN1-211ENST00000471260 DSCR8Q96T75 97 aa8□□□□□ -1.13
HMGN1-211ENST00000471260 Q6ZQY7 126 aa7.99□□□□□ -1.13
HMGN1-211ENST00000471260 SS18L2Q9UHA2 77 aa7.99□□□□□ -1.13
HMGN1-211ENST00000471260 LAMTOR3Q9UHA4 124 aa7.98□□□□□ -1.13
HMGN1-211ENST00000471260 A0A087X002 238 aa7.97□□□□□ -1.13
HMGN1-211ENST00000471260 FAM229BQ4G0N7 80 aa7.97□□□□□ -1.13
HMGN1-211ENST00000471260 SERP2Q8N6R1 65 aa7.97□□□□□ -1.13
HMGN1-211ENST00000471260 TYMSOSQ8TAI1 123 aa7.97□□□□□ -1.13
HMGN1-211ENST00000471260 IGKV3D-7A0A0C4DH55 119 aa7.96□□□□□ -1.14
HMGN1-211ENST00000471260 TRBV7-4A0A0J9YYF1 115 aa7.96□□□□□ -1.14
HMGN1-211ENST00000471260 CXCL6P80162 114 aa7.96□□□□□ -1.14
HMGN1-211ENST00000471260 SMIM20Q8N5G0 67 aa7.95□□□□□ -1.14
HMGN1-211ENST00000471260 LPAP08519 4548 aa7.95□□□□□ -1.14
HMGN1-211ENST00000471260 PRR4Q16378 134 aa7.94□□□□□ -1.14
HMGN1-211ENST00000471260 FAM19A1Q7Z5A9 133 aa7.94□□□□□ -1.14
HMGN1-211ENST00000471260 A0A1B0GW54 56 aa7.93□□□□□ -1.14
HMGN1-211ENST00000471260 KCNQ1DNQ9H478 68 aa7.93□□□□□ -1.14
HMGN1-211ENST00000471260 RNF213Q63HN8 5207 aa7.93□□□□□ -1.14
HMGN1-211ENST00000471260 PRYO14603 147 aa7.92□□□□□ -1.14
HMGN1-211ENST00000471260 PRLHP81277 87 aa7.92□□□□□ -1.14
HMGN1-211ENST00000471260 KRTAP13-2Q52LG2 175 aa7.91□□□□□ -1.14
HMGN1-211ENST00000471260 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
HMGN1-211ENST00000471260 TMEM258P61165 79 aa7.9□□□□□ -1.14
HMGN1-211ENST00000471260 Q6ZVQ6 151 aa7.9□□□□□ -1.14
HMGN1-211ENST00000471260 DHRS4-AS1Q9P1J3 65 aa7.9□□□□□ -1.14
HMGN1-211ENST00000471260 A0A087WVE0 104 aa7.88□□□□□ -1.15
HMGN1-211ENST00000471260 LINC00304Q8N9R0 145 aa7.88□□□□□ -1.15
HMGN1-211ENST00000471260 LINC01547P58512 204 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-211ENST00000471260 SPRR1AP35321 89 aa7.86□□□□□ -1.15
HMGN1-211ENST00000471260 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
HMGN1-211ENST00000471260 HIGD2AQ9BW72 106 aa7.85□□□□□ -1.15
HMGN1-211ENST00000471260 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-211ENST00000471260 Q6ZRX8 168 aa7.84□□□□□ -1.15
HMGN1-211ENST00000471260 IGLV5-48A0A075B6I7 105 aa7.83□□□□□ -1.16
HMGN1-211ENST00000471260 J3KT08 172 aa7.83□□□□□ -1.16
HMGN1-211ENST00000471260 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
HMGN1-211ENST00000471260 SPRR4Q96PI1 79 aa7.83□□□□□ -1.16
HMGN1-211ENST00000471260 SPAG11AQ6PDA7 123 aa7.82□□□□□ -1.16
HMGN1-211ENST00000471260 ETDCA0A1B0GVM5 59 aa7.81□□□□□ -1.16
HMGN1-211ENST00000471260 KRTAP4-16G5E9R7 235 aaPredicted RBP7.81□□□□□ -1.16
HMGN1-211ENST00000471260 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
HMGN1-211ENST00000471260 SVIPQ8NHG7 77 aa7.78□□□□□ -1.16
HMGN1-211ENST00000471260 TPRXLQ17RH7 258 aa7.77□□□□□ -1.17
HMGN1-211ENST00000471260 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
HMGN1-211ENST00000471260 NDUFC1O43677 76 aa7.76□□□□□ -1.17
HMGN1-211ENST00000471260 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
HMGN1-211ENST00000471260 Q8N377 158 aa7.76□□□□□ -1.17
HMGN1-211ENST00000471260 RETNLBQ9BQ08 111 aa7.76□□□□□ -1.17
HMGN1-211ENST00000471260 IGLV7-46A0A075B6I9 117 aa7.75□□□□□ -1.17
HMGN1-211ENST00000471260 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms