RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 A0A1B0GW54 56 aa5.65□□□□□ -1.5
PTPRE-207ENST00000471218 SPRR1BP22528 89 aa5.65□□□□□ -1.5
PTPRE-207ENST00000471218 UBE2AP49459 152 aa5.65□□□□□ -1.5
PTPRE-207ENST00000471218 HAMPP81172 84 aa5.65□□□□□ -1.5
PTPRE-207ENST00000471218 RBM3P98179 157 aaKnown RBP5.65□□□□□ -1.5
PTPRE-207ENST00000471218 SMCR5Q8TEV8 140 aa5.65□□□□□ -1.5
PTPRE-207ENST00000471218 ZNF706Q9Y5V0 76 aaPredicted RBP5.65□□□□□ -1.5
PTPRE-207ENST00000471218 NDUFV3P56181 108 aaKnown RBP5.63□□□□□ -1.51
PTPRE-207ENST00000471218 LINC01547P58512 204 aaPredicted RBP5.63□□□□□ -1.51
PTPRE-207ENST00000471218 SCXQ7RTU7 201 aa5.63□□□□□ -1.51
PTPRE-207ENST00000471218 DSCR8Q96T75 97 aa5.63□□□□□ -1.51
PTPRE-207ENST00000471218 LAMTOR3Q9UHA4 124 aa5.63□□□□□ -1.51
PTPRE-207ENST00000471218 TRBV7-4A0A0J9YYF1 115 aa5.62□□□□□ -1.51
PTPRE-207ENST00000471218 Q8N377 158 aa5.62□□□□□ -1.51
PTPRE-207ENST00000471218 CIRBP-AS1Q8TBR5 109 aa5.62□□□□□ -1.51
PTPRE-207ENST00000471218 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
PTPRE-207ENST00000471218 IGLV8-61A0A075B6I0 122 aa5.61□□□□□ -1.51
PTPRE-207ENST00000471218 ZNF861PO60384 105 aa5.61□□□□□ -1.51
PTPRE-207ENST00000471218 CCKP06307 115 aa5.61□□□□□ -1.51
PTPRE-207ENST00000471218 RPL37AP61513 92 aaKnown RBP5.61□□□□□ -1.51
PTPRE-207ENST00000471218 KRTAP11-1Q8IUC1 163 aa5.61□□□□□ -1.51
PTPRE-207ENST00000471218 HIGD2AQ9BW72 106 aa5.61□□□□□ -1.51
PTPRE-207ENST00000471218 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
PTPRE-207ENST00000471218 F8WEM9 126 aa5.6□□□□□ -1.51
PTPRE-207ENST00000471218 PRLHP81277 87 aa5.6□□□□□ -1.51
PTPRE-207ENST00000471218 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
PTPRE-207ENST00000471218 HMCN2Q8NDA2 5059 aa5.6□□□□□ -1.51
PTPRE-207ENST00000471218 ERC2-IT1O76042 136 aa5.59□□□□□ -1.51
PTPRE-207ENST00000471218 Q6JHZ5 121 aa5.59□□□□□ -1.51
PTPRE-207ENST00000471218 Q6ZQT0 140 aa5.59□□□□□ -1.51
PTPRE-207ENST00000471218 C14orf132Q9NPU4 83 aa5.59□□□□□ -1.51
PTPRE-207ENST00000471218 IGLV7-43P04211 117 aa5.58□□□□□ -1.52
PTPRE-207ENST00000471218 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
PTPRE-207ENST00000471218 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
PTPRE-207ENST00000471218 KRTAP10-4P60372 401 aaPredicted RBP5.56□□□□□ -1.52
PTPRE-207ENST00000471218 GAGE2AQ6NT46 116 aa5.56□□□□□ -1.52
PTPRE-207ENST00000471218 SMIM29Q86T20 159 aa5.56□□□□□ -1.52
PTPRE-207ENST00000471218 ST20-AS1Q8NBB2 130 aa5.56□□□□□ -1.52
PTPRE-207ENST00000471218 SPRR4Q96PI1 79 aa5.56□□□□□ -1.52
PTPRE-207ENST00000471218 VPS25Q9BRG1 176 aa5.56□□□□□ -1.52
PTPRE-207ENST00000471218 ATP5EP2Q5VTU8 51 aa5.55□□□□□ -1.52
PTPRE-207ENST00000471218 LINC00643Q86TS7 51 aa5.55□□□□□ -1.52
PTPRE-207ENST00000471218 DEFB105AQ8NG35 78 aa5.55□□□□□ -1.52
PTPRE-207ENST00000471218 CDIP1Q9H305 208 aa5.55□□□□□ -1.52
PTPRE-207ENST00000471218 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
PTPRE-207ENST00000471218 Q6Q795 121 aa5.54□□□□□ -1.52
PTPRE-207ENST00000471218 FAM229BQ4G0N7 80 aa5.53□□□□□ -1.52
PTPRE-207ENST00000471218 Q8NBF4 154 aa5.53□□□□□ -1.52
PTPRE-207ENST00000471218 UBL5Q9BZL1 73 aa5.53□□□□□ -1.52
PTPRE-207ENST00000471218 IMUPQ9GZP8 106 aa5.52□□□□□ -1.53
PTPRE-207ENST00000471218 CRYGAP11844 174 aa5.51□□□□□ -1.53
PTPRE-207ENST00000471218 SIGMAR1Q99720 223 aa5.51□□□□□ -1.53
PTPRE-207ENST00000471218 TRBV7-7A0A0K0K1E9 115 aa5.5□□□□□ -1.53
PTPRE-207ENST00000471218 LINC00846Q9NV44 126 aa5.5□□□□□ -1.53
PTPRE-207ENST00000471218 SPINK6Q6UWN8 80 aa5.49□□□□□ -1.53
PTPRE-207ENST00000471218 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
PTPRE-207ENST00000471218 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
PTPRE-207ENST00000471218 IGFL1Q6UW32 110 aa5.48□□□□□ -1.53
PTPRE-207ENST00000471218 SSBP3-AS1Q7Z2R9 100 aa5.48□□□□□ -1.53
PTPRE-207ENST00000471218 C3orf22Q8N5N4 141 aa5.48□□□□□ -1.53
PTPRE-207ENST00000471218 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
PTPRE-207ENST00000471218 CXCL6P80162 114 aa5.47□□□□□ -1.53
PTPRE-207ENST00000471218 CD164Q04900 197 aa5.47□□□□□ -1.53
PTPRE-207ENST00000471218 A0A1B0GV72 72 aa5.46□□□□□ -1.54
PTPRE-207ENST00000471218 MT1HL1P0DM35 61 aa5.46□□□□□ -1.54
PTPRE-207ENST00000471218 Q6ZVQ6 151 aa5.45□□□□□ -1.54
PTPRE-207ENST00000471218 SS18L2Q9UHA2 77 aa5.45□□□□□ -1.54
PTPRE-207ENST00000471218 NREPQ16612 68 aa5.44□□□□□ -1.54
PTPRE-207ENST00000471218 C9orf153Q5TBE3 101 aa5.43□□□□□ -1.54
PTPRE-207ENST00000471218 TNXBP22105 4242 aa5.42□□□□□ -1.54
PTPRE-207ENST00000471218 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
PTPRE-207ENST00000471218 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
PTPRE-207ENST00000471218 LRP2P98164 4655 aa5.42□□□□□ -1.54
PTPRE-207ENST00000471218 IGLV9-49A0A0B4J1Y8 123 aa5.41□□□□□ -1.54
PTPRE-207ENST00000471218 J3KT08 172 aa5.41□□□□□ -1.54
PTPRE-207ENST00000471218 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
PTPRE-207ENST00000471218 MOBPQ13875 183 aa5.41□□□□□ -1.54
PTPRE-207ENST00000471218 Q5XG85 94 aa5.41□□□□□ -1.54
PTPRE-207ENST00000471218 BPY2O14599 106 aa5.39□□□□□ -1.55
PTPRE-207ENST00000471218 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
PTPRE-207ENST00000471218 ASB16-AS1Q495Z4 193 aa5.39□□□□□ -1.55
PTPRE-207ENST00000471218 A0A087WSZ3 146 aa5.38□□□□□ -1.55
PTPRE-207ENST00000471218 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
PTPRE-207ENST00000471218 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
PTPRE-207ENST00000471218 LIMD2Q9BT23 127 aa5.36□□□□□ -1.55
PTPRE-207ENST00000471218 A0A087X002 238 aa5.35□□□□□ -1.55
PTPRE-207ENST00000471218 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
PTPRE-207ENST00000471218 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
PTPRE-207ENST00000471218 IGKV3D-7A0A0C4DH55 119 aa5.34□□□□□ -1.55
PTPRE-207ENST00000471218 SPINK1P00995 79 aa5.34□□□□□ -1.55
PTPRE-207ENST00000471218 HIST1H4AP62805 103 aaKnown RBP5.34□□□□□ -1.55
PTPRE-207ENST00000471218 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
PTPRE-207ENST00000471218 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
PTPRE-207ENST00000471218 A0A0U1RQV1 116 aa5.32□□□□□ -1.56
PTPRE-207ENST00000471218 A8MWP4 228 aa5.32□□□□□ -1.56
PTPRE-207ENST00000471218 C4orf48Q5BLP8 95 aa5.32□□□□□ -1.56
PTPRE-207ENST00000471218 SMIM20Q8N5G0 67 aa5.32□□□□□ -1.56
PTPRE-207ENST00000471218 ATOX1O00244 68 aa5.31□□□□□ -1.56
PTPRE-207ENST00000471218 NDUFB1O75438 58 aa5.31□□□□□ -1.56
PTPRE-207ENST00000471218 A0A0G2JQZ4 141 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms