RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 IGLC3P0DOY3 106 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 HRES1P13985 223 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 LINC00313P59037 77 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 TSPEAR-AS2P59090 65 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 RHEBQ15382 184 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 HERC1Q15751 4861 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 KRTAP25-1Q3LHN0 102 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 MEIG1Q5JSS6 88 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 KRTAP13-1Q8IUC0 172 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 ARL17AQ8IVW1 177 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 PLEKHB2Q96CS7 222 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 SEC11CQ9BY50 192 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 KCNQ1DNQ9H478 68 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 XAGE1AQ9HD64 81 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 LRP1BQ9NZR2 4599 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 ERG28Q9UKR5 140 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 TRAV12-1A0A0B4J245 112 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 MYMXA0A1B0GTQ4 84 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 TMEM218A2RU14 115 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 H3BPC8 53 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 HBDP02042 147 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 SPRR1AP35321 89 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 LINC00158P58513 81 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 PMAIP1Q13794 54 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 NDUFA5Q16718 116 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 ASB16-AS1Q495Z4 193 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 CLLU1Q5K131 121 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 BAGE3Q86Y29 109 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 DAND5Q8N907 189 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 COPS9Q8WXC6 57 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 CHCHD1Q96BP2 118 aaKnown RBP1.35□□□□□ -2.19
UBXN4-206ENST00000470687 TMEM126AQ9H061 195 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 DNAH5Q8TE73 4624 aa1.35□□□□□ -2.19
UBXN4-206ENST00000470687 DYNC1H1Q14204 4646 aaKnown RBP1.35□□□□□ -2.19
UBXN4-206ENST00000470687 ETDCA0A1B0GVM5 59 aa1.34□□□□□ -2.19
UBXN4-206ENST00000470687 ZNF815PA8K554 130 aa1.34□□□□□ -2.19
UBXN4-206ENST00000470687 NDUFC2O95298 119 aa1.34□□□□□ -2.19
UBXN4-206ENST00000470687 ZNF22P17026 224 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-206ENST00000470687 PLNP26678 52 aa1.34□□□□□ -2.19
UBXN4-206ENST00000470687 AKR1D1P51857 326 aa1.34□□□□□ -2.19
UBXN4-206ENST00000470687 NDUFA6P56556 154 aa1.34□□□□□ -2.19
UBXN4-206ENST00000470687 HIST1H4AP62805 103 aaKnown RBP1.34□□□□□ -2.19
UBXN4-206ENST00000470687 TMEM170BQ5T4T1 132 aa1.34□□□□□ -2.19
UBXN4-206ENST00000470687 ZNF625Q96I27 306 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-206ENST00000470687 SPRR4Q96PI1 79 aa1.34□□□□□ -2.19
UBXN4-206ENST00000470687 MYCBP2O75592 4640 aa1.34□□□□□ -2.2
UBXN4-206ENST00000470687 C11orf86A6NJI1 115 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 SPINK8P0C7L1 97 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 ADCYAP1P18509 176 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 S100A7L2Q5SY68 101 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 Q5XG85 94 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 Q6ZRX8 168 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 SVBPQ8N300 66 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 ANKRD29Q8N6D5 301 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 IFI27L1Q96BM0 104 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 LIMD2Q9BT23 127 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 HSPB8Q9UJY1 196 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 UBR4Q5T4S7 5183 aa1.33□□□□□ -2.2
UBXN4-206ENST00000470687 FAT1Q14517 4588 aa1.32□□□□□ -2.2
UBXN4-206ENST00000470687 TRBV7-6A0A0J9YX20 115 aa1.32□□□□□ -2.2
UBXN4-206ENST00000470687 TMEM238C9JI98 176 aa1.32□□□□□ -2.2
UBXN4-206ENST00000470687 SPRR1BP22528 89 aa1.32□□□□□ -2.2
UBXN4-206ENST00000470687 PRLHP81277 87 aa1.32□□□□□ -2.2
UBXN4-206ENST00000470687 C18orf32Q8TCD1 76 aa1.32□□□□□ -2.2
UBXN4-206ENST00000470687 SMCR5Q8TEV8 140 aa1.32□□□□□ -2.2
UBXN4-206ENST00000470687 LAMTOR3Q9UHA4 124 aa1.32□□□□□ -2.2
UBXN4-206ENST00000470687 TEX49A0A1B0GTD5 131 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 A0A1W2PNM2 257 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 J3QQQ9 107 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 LST1O00453 97 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 LEPROTO15243 131 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 ZNF73O43830 326 aaPredicted RBP1.31□□□□□ -2.2
UBXN4-206ENST00000470687 TIMM17BO60830 172 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 SNCGO76070 127 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 LEPROTL1O95214 131 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 TCL1BO95988 128 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 LGALS3P17931 250 aaKnown RBP1.31□□□□□ -2.2
UBXN4-206ENST00000470687 C2orf91Q6ZV80 131 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 SIGMAR1Q99720 223 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 PRO1933Q9H354 126 aa1.31□□□□□ -2.2
UBXN4-206ENST00000470687 NHP2Q9NX24 153 aaKnown RBP1.31□□□□□ -2.2
UBXN4-206ENST00000470687 RNF213Q63HN8 5207 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 TRAV23DV6A0A075B6W5 121 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 TRBV10-3A0A0K0K1G6 114 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 DPM2O94777 84 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 P0C880 135 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 SMIM13P0DJ93 91 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 IFITM1P13164 125 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST1H2BOP23527 126 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST1H2BBP33778 126 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST1H2BDP58876 126 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 TMEM258P61165 79 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST1H2BCP62807 126 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST2H2BEQ16778 126 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST1H2BHQ93079 126 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 C20orf166-AS1Q96NR2 134 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST1H2BNQ99877 126 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HIST1H2BMQ99879 126 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 RETNLBQ9BQ08 111 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms