RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 KRTAP26-1Q6PEX3 210 aa2.97□□□□□ -1.93
RBM39-227ENST00000470563 C1orf64Q8NEQ6 169 aa2.97□□□□□ -1.93
RBM39-227ENST00000470563 XAGE1AQ9HD64 81 aa2.97□□□□□ -1.93
RBM39-227ENST00000470563 SMG1Q96Q15 3661 aaKnown RBP2.97□□□□□ -1.93
RBM39-227ENST00000470563 BOD1L1Q8NFC6 3051 aa2.96□□□□□ -1.93
RBM39-227ENST00000470563 PKD1L2Q7Z442 2459 aa2.96□□□□□ -1.94
RBM39-227ENST00000470563 C3orf84H3BNL1 204 aa2.96□□□□□ -1.94
RBM39-227ENST00000470563 DEFB135Q30KP9 77 aa2.96□□□□□ -1.94
RBM39-227ENST00000470563 FAM229BQ4G0N7 80 aa2.96□□□□□ -1.94
RBM39-227ENST00000470563 IGF2RP11717 2491 aa2.95□□□□□ -1.94
RBM39-227ENST00000470563 TRAV22A0A0B4J277 110 aa2.95□□□□□ -1.94
RBM39-227ENST00000470563 A0A1W2PNM2 257 aa2.95□□□□□ -1.94
RBM39-227ENST00000470563 PSCAO43653 123 aa2.95□□□□□ -1.94
RBM39-227ENST00000470563 IGLV7-43P04211 117 aa2.95□□□□□ -1.94
RBM39-227ENST00000470563 LINC00588Q9Y4M8 146 aa2.95□□□□□ -1.94
RBM39-227ENST00000470563 ATMQ13315 3056 aa2.95□□□□□ -1.94
RBM39-227ENST00000470563 ZFHX2Q9C0A1 2572 aaPredicted RBP2.95□□□□□ -1.94
RBM39-227ENST00000470563 C2CD3Q4AC94 2353 aa2.94□□□□□ -1.94
RBM39-227ENST00000470563 B9D2Q9BPU9 175 aa2.94□□□□□ -1.94
RBM39-227ENST00000470563 TLN2Q9Y4G6 2542 aa2.93□□□□□ -1.94
RBM39-227ENST00000470563 CSMD1Q96PZ7 3565 aa2.93□□□□□ -1.94
RBM39-227ENST00000470563 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
RBM39-227ENST00000470563 K7EQZ3 153 aa2.92□□□□□ -1.94
RBM39-227ENST00000470563 HTN3P15516 51 aa2.92□□□□□ -1.94
RBM39-227ENST00000470563 LINC00208Q96KT6 92 aa2.92□□□□□ -1.94
RBM39-227ENST00000470563 RBM12B-AS1Q9P1G2 102 aa2.92□□□□□ -1.94
RBM39-227ENST00000470563 SPG11Q96JI7 2443 aa2.92□□□□□ -1.94
RBM39-227ENST00000470563 LOC101927531A0A1B0GV80 90 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 SPRR1BP22528 89 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 ATP11AUNQ6ZP68 121 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 WFDC10BQ8IUB3 73 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 DEFB105AQ8NG35 78 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 TP53AIP1Q9HCN2 124 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 MYO9AB2RTY4 2548 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 NCOR2Q9Y618 2525 aa2.91□□□□□ -1.94
RBM39-227ENST00000470563 NAV2Q8IVL1 2488 aa2.9□□□□□ -1.95
RBM39-227ENST00000470563 A8MWP4 228 aa2.9□□□□□ -1.95
RBM39-227ENST00000470563 H0Y9P7 68 aa2.9□□□□□ -1.95
RBM39-227ENST00000470563 RPL37AP61513 92 aaKnown RBP2.9□□□□□ -1.95
RBM39-227ENST00000470563 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.95
RBM39-227ENST00000470563 C9orf163Q8N9P6 203 aa2.9□□□□□ -1.95
RBM39-227ENST00000470563 UNC79Q9P2D8 2635 aa2.89□□□□□ -1.95
RBM39-227ENST00000470563 DEFB4AO15263 64 aa2.89□□□□□ -1.95
RBM39-227ENST00000470563 PTPN13Q12923 2485 aa2.89□□□□□ -1.95
RBM39-227ENST00000470563 Q5VV11 94 aa2.89□□□□□ -1.95
RBM39-227ENST00000470563 CASC2Q6XLA1 102 aa2.89□□□□□ -1.95
RBM39-227ENST00000470563 CDC42SE1Q9NRR8 79 aa2.89□□□□□ -1.95
RBM39-227ENST00000470563 MUC3AQ02505 3323 aa2.89□□□□□ -1.95
RBM39-227ENST00000470563 KMT2BQ9UMN6 2715 aaPredicted RBP2.89□□□□□ -1.95
RBM39-227ENST00000470563 A8MUN3 132 aa2.88□□□□□ -1.95
RBM39-227ENST00000470563 PHF5AQ7RTV0 110 aaKnown RBP2.88□□□□□ -1.95
RBM39-227ENST00000470563 LINC01558Q9Y6Z2 57 aa2.88□□□□□ -1.95
RBM39-227ENST00000470563 CELSR1Q9NYQ6 3014 aa2.87□□□□□ -1.95
RBM39-227ENST00000470563 ASPMQ8IZT6 3477 aa2.87□□□□□ -1.95
RBM39-227ENST00000470563 USP9YO00507 2555 aaPredicted RBP2.87□□□□□ -1.95
RBM39-227ENST00000470563 USP9XQ93008 2570 aaPredicted RBP2.87□□□□□ -1.95
RBM39-227ENST00000470563 A0A087WSZ3 146 aa2.87□□□□□ -1.95
RBM39-227ENST00000470563 DEFB131BA0A096LNP1 70 aa2.87□□□□□ -1.95
RBM39-227ENST00000470563 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
RBM39-227ENST00000470563 ASB16-AS1Q495Z4 193 aa2.87□□□□□ -1.95
RBM39-227ENST00000470563 LRRK2Q5S007 2527 aa2.87□□□□□ -1.95
RBM39-227ENST00000470563 JMJD1CQ15652 2540 aa2.86□□□□□ -1.95
RBM39-227ENST00000470563 CNBPP62633 177 aaKnown RBP2.86□□□□□ -1.95
RBM39-227ENST00000470563 WFDC13Q8IUB5 93 aa2.86□□□□□ -1.95
RBM39-227ENST00000470563 LINC00472Q9H8W2 130 aa2.86□□□□□ -1.95
RBM39-227ENST00000470563 PIEZO1Q92508 2521 aa2.86□□□□□ -1.95
RBM39-227ENST00000470563 FN1P02751 2386 aaKnown RBP2.86□□□□□ -1.95
RBM39-227ENST00000470563 BAHCC1Q9P281 2608 aa2.86□□□□□ -1.95
RBM39-227ENST00000470563 SETXQ7Z333 2677 aaKnown RBP2.86□□□□□ -1.95
RBM39-227ENST00000470563 ZFHX3Q15911 3703 aa2.85□□□□□ -1.95
RBM39-227ENST00000470563 CHD6Q8TD26 2715 aa2.85□□□□□ -1.95
RBM39-227ENST00000470563 ACACBO00763 2458 aa2.85□□□□□ -1.95
RBM39-227ENST00000470563 MAP1AP78559 2803 aaPredicted RBP2.85□□□□□ -1.95
RBM39-227ENST00000470563 COA5Q86WW8 74 aa2.85□□□□□ -1.95
RBM39-227ENST00000470563 PRR15LQ9BU68 103 aa2.85□□□□□ -1.95
RBM39-227ENST00000470563 PLAC8Q9NZF1 115 aa2.85□□□□□ -1.95
RBM39-227ENST00000470563 MMP24-AS1A0A0U1RRL7 71 aa2.84□□□□□ -1.95
RBM39-227ENST00000470563 A6NED7 52 aa2.84□□□□□ -1.95
RBM39-227ENST00000470563 KRTAP10-8P60410 259 aa2.84□□□□□ -1.95
RBM39-227ENST00000470563 C7orf65Q6ZTY9 151 aa2.84□□□□□ -1.95
RBM39-227ENST00000470563 ZNF706Q9Y5V0 76 aaPredicted RBP2.84□□□□□ -1.95
RBM39-227ENST00000470563 ASH1LQ9NR48 2969 aaKnown RBP2.84□□□□□ -1.96
RBM39-227ENST00000470563 HIVEP2P31629 2446 aa2.83□□□□□ -1.96
RBM39-227ENST00000470563 ITPR3Q14573 2671 aa2.83□□□□□ -1.96
RBM39-227ENST00000470563 A6NN06 94 aa2.83□□□□□ -1.96
RBM39-227ENST00000470563 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
RBM39-227ENST00000470563 K7ERS5 55 aa2.82□□□□□ -1.96
RBM39-227ENST00000470563 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
RBM39-227ENST00000470563 FAM208BQ5VWN6 2430 aa2.82□□□□□ -1.96
RBM39-227ENST00000470563 TEX15Q9BXT5 2789 aa2.81□□□□□ -1.96
RBM39-227ENST00000470563 MXRA5Q9NR99 2828 aa2.81□□□□□ -1.96
RBM39-227ENST00000470563 PRB1P04280 392 aa2.81□□□□□ -1.96
RBM39-227ENST00000470563 LCA10Q71F78 164 aa2.81□□□□□ -1.96
RBM39-227ENST00000470563 SPTBN4Q9H254 2564 aa2.81□□□□□ -1.96
RBM39-227ENST00000470563 AKAP9Q99996 3911 aa2.8□□□□□ -1.96
RBM39-227ENST00000470563 VPS13CQ709C8 3753 aa2.8□□□□□ -1.96
RBM39-227ENST00000470563 LAMA5O15230 3695 aa2.8□□□□□ -1.96
RBM39-227ENST00000470563 UTP20O75691 2785 aaKnown RBP2.8□□□□□ -1.96
RBM39-227ENST00000470563 SONP18583 2426 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms