RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
UBE3C-205ENST00000470408 DMXL2Q8TDJ6 3036 aa6.12□□□□□ -1.43
UBE3C-205ENST00000470408 ADGRG4Q8IZF6 3080 aa6.12□□□□□ -1.43
UBE3C-205ENST00000470408 Q8N377 158 aa6.12□□□□□ -1.43
UBE3C-205ENST00000470408 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
UBE3C-205ENST00000470408 DCHS1Q96JQ0 3298 aa6.11□□□□□ -1.43
UBE3C-205ENST00000470408 ATMQ13315 3056 aa6.1□□□□□ -1.43
UBE3C-205ENST00000470408 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
UBE3C-205ENST00000470408 Q1T7F1 81 aa6.09□□□□□ -1.43
UBE3C-205ENST00000470408 A0A1B0GVX0 72 aa6.09□□□□□ -1.43
UBE3C-205ENST00000470408 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
UBE3C-205ENST00000470408 TNP2Q05952 138 aa6.09□□□□□ -1.44
UBE3C-205ENST00000470408 C8orf17Q9NRJ1 99 aa6.09□□□□□ -1.44
UBE3C-205ENST00000470408 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
UBE3C-205ENST00000470408 SMR3BP02814 79 aaPredicted RBP6.08□□□□□ -1.44
UBE3C-205ENST00000470408 CENPEQ02224 2701 aa6.08□□□□□ -1.44
UBE3C-205ENST00000470408 UNC79Q9P2D8 2635 aa6.07□□□□□ -1.44
UBE3C-205ENST00000470408 FAM229BQ4G0N7 80 aa6.07□□□□□ -1.44
UBE3C-205ENST00000470408 IGLV8-61A0A075B6I0 122 aa6.06□□□□□ -1.44
UBE3C-205ENST00000470408 SMG1Q96Q15 3661 aaKnown RBP6.05□□□□□ -1.44
UBE3C-205ENST00000470408 OCR1Q9BZK8 76 aa6.04□□□□□ -1.44
UBE3C-205ENST00000470408 LRBAP50851 2863 aa6.03□□□□□ -1.44
UBE3C-205ENST00000470408 PLAC8Q9NZF1 115 aa6.03□□□□□ -1.44
UBE3C-205ENST00000470408 STAB1Q9NY15 2570 aa6.03□□□□□ -1.44
UBE3C-205ENST00000470408 SPENQ96T58 3664 aaKnown RBP6.03□□□□□ -1.44
UBE3C-205ENST00000470408 IGLV5-48A0A075B6I7 105 aa6.03□□□□□ -1.44
UBE3C-205ENST00000470408 BAHCC1Q9P281 2608 aa6.02□□□□□ -1.45
UBE3C-205ENST00000470408 Q5XG85 94 aa6.02□□□□□ -1.45
UBE3C-205ENST00000470408 KALRNO60229 2985 aa6.02□□□□□ -1.45
UBE3C-205ENST00000470408 A0A1W2PNM2 257 aa6.01□□□□□ -1.45
UBE3C-205ENST00000470408 RELNP78509 3460 aa6.01□□□□□ -1.45
UBE3C-205ENST00000470408 DSCR10P59022 87 aa6.01□□□□□ -1.45
UBE3C-205ENST00000470408 KRTAP21-3Q3LHN1 58 aa6.01□□□□□ -1.45
UBE3C-205ENST00000470408 RBM12B-AS1Q9P1G2 102 aa6.01□□□□□ -1.45
UBE3C-205ENST00000470408 TACC2O95359 2948 aa6.01□□□□□ -1.45
UBE3C-205ENST00000470408 SETXQ7Z333 2677 aaKnown RBP6□□□□□ -1.45
UBE3C-205ENST00000470408 LCE6AA0A183 80 aa6□□□□□ -1.45
UBE3C-205ENST00000470408 COL6A5A8TX70 2615 aa6□□□□□ -1.45
UBE3C-205ENST00000470408 TEP1Q99973 2627 aaKnown RBP6□□□□□ -1.45
UBE3C-205ENST00000470408 IGSF10Q6WRI0 2623 aa5.98□□□□□ -1.45
UBE3C-205ENST00000470408 MAP1AP78559 2803 aaPredicted RBP5.98□□□□□ -1.45
UBE3C-205ENST00000470408 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
UBE3C-205ENST00000470408 Q75L30 129 aa5.97□□□□□ -1.45
UBE3C-205ENST00000470408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.97□□□□□ -1.45
UBE3C-205ENST00000470408 ZZEF1O43149 2961 aa5.96□□□□□ -1.46
UBE3C-205ENST00000470408 ANAPC11Q9NYG5 84 aa5.95□□□□□ -1.46
UBE3C-205ENST00000470408 TEX15Q9BXT5 2789 aa5.95□□□□□ -1.46
UBE3C-205ENST00000470408 FAM104AQ969W3 186 aa5.94□□□□□ -1.46
UBE3C-205ENST00000470408 SPRR1AP35321 89 aa5.94□□□□□ -1.46
UBE3C-205ENST00000470408 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
UBE3C-205ENST00000470408 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
UBE3C-205ENST00000470408 FP248Q71RG6 208 aaPredicted RBP5.93□□□□□ -1.46
UBE3C-205ENST00000470408 SPRR1BP22528 89 aa5.92□□□□□ -1.46
UBE3C-205ENST00000470408 A0A0G2JQZ4 141 aa5.91□□□□□ -1.46
UBE3C-205ENST00000470408 COL12A1Q99715 3063 aa5.9□□□□□ -1.47
UBE3C-205ENST00000470408 CYSTM1Q9H1C7 97 aa5.89□□□□□ -1.47
UBE3C-205ENST00000470408 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
UBE3C-205ENST00000470408 M0R2T5 61 aa5.89□□□□□ -1.47
UBE3C-205ENST00000470408 PRR26Q8N8Z3 221 aa5.89□□□□□ -1.47
UBE3C-205ENST00000470408 CSMD1Q96PZ7 3565 aa5.89□□□□□ -1.47
UBE3C-205ENST00000470408 Q6ZSA8 131 aa5.88□□□□□ -1.47
UBE3C-205ENST00000470408 Q8N9P0 234 aaPredicted RBP5.88□□□□□ -1.47
UBE3C-205ENST00000470408 KRTAP26-1Q6PEX3 210 aa5.87□□□□□ -1.47
UBE3C-205ENST00000470408 CHD6Q8TD26 2715 aa5.87□□□□□ -1.47
UBE3C-205ENST00000470408 Q6ZR54 194 aa5.86□□□□□ -1.47
UBE3C-205ENST00000470408 SVEP1Q4LDE5 3571 aa5.85□□□□□ -1.47
UBE3C-205ENST00000470408 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
UBE3C-205ENST00000470408 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
UBE3C-205ENST00000470408 KRTAP1-5Q9BYS1 174 aa5.85□□□□□ -1.47
UBE3C-205ENST00000470408 DCHS2Q6V1P9 2916 aa5.85□□□□□ -1.47
UBE3C-205ENST00000470408 HRNRQ86YZ3 2850 aaPredicted RBP5.84□□□□□ -1.47
UBE3C-205ENST00000470408 BSNQ9UPA5 3926 aa5.84□□□□□ -1.48
UBE3C-205ENST00000470408 NOTCH1P46531 2555 aa5.83□□□□□ -1.48
UBE3C-205ENST00000470408 Q5VV11 94 aa5.83□□□□□ -1.48
UBE3C-205ENST00000470408 GCN1Q92616 2671 aaKnown RBP5.82□□□□□ -1.48
UBE3C-205ENST00000470408 OXTP01178 125 aa5.81□□□□□ -1.48
UBE3C-205ENST00000470408 Q5VSD8 79 aa5.81□□□□□ -1.48
UBE3C-205ENST00000470408 SEC61BP60468 96 aaKnown RBP5.8□□□□□ -1.48
UBE3C-205ENST00000470408 KRTAP10-1P60331 282 aa5.79□□□□□ -1.48
UBE3C-205ENST00000470408 NBEAL1Q6ZS30 2694 aa5.79□□□□□ -1.48
UBE3C-205ENST00000470408 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
UBE3C-205ENST00000470408 FLNCQ14315 2725 aa5.78□□□□□ -1.48
UBE3C-205ENST00000470408 NSD1Q96L73 2696 aaPredicted RBP5.78□□□□□ -1.48
UBE3C-205ENST00000470408 HRES1P13985 223 aa5.78□□□□□ -1.48
UBE3C-205ENST00000470408 UTP20O75691 2785 aaKnown RBP5.77□□□□□ -1.49
UBE3C-205ENST00000470408 KMT2BQ9UMN6 2715 aaPredicted RBP5.77□□□□□ -1.49
UBE3C-205ENST00000470408 ZCCHC13Q8WW36 166 aaKnown RBP5.77□□□□□ -1.49
UBE3C-205ENST00000470408 Q8N1X5 172 aa5.77□□□□□ -1.49
UBE3C-205ENST00000470408 ITPR1Q14643 2758 aa5.76□□□□□ -1.49
UBE3C-205ENST00000470408 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
UBE3C-205ENST00000470408 H3BS24 57 aa5.76□□□□□ -1.49
UBE3C-205ENST00000470408 KRTAP10-2P60368 255 aa5.75□□□□□ -1.49
UBE3C-205ENST00000470408 A0A1B0GU33 70 aa5.75□□□□□ -1.49
UBE3C-205ENST00000470408 ITPR2Q14571 2701 aa5.75□□□□□ -1.49
UBE3C-205ENST00000470408 UBR5O95071 2799 aaPredicted RBP5.74□□□□□ -1.49
UBE3C-205ENST00000470408 Q8NDZ9 215 aa5.74□□□□□ -1.49
UBE3C-205ENST00000470408 LINC00472Q9H8W2 130 aa5.73□□□□□ -1.49
UBE3C-205ENST00000470408 CRYBG3Q68DQ2 2970 aa5.73□□□□□ -1.49
UBE3C-205ENST00000470408 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
UBE3C-205ENST00000470408 A0A0D9SG42 100 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms