RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 MOBPQ13875 183 aa6.16□□□□□ -1.42
SMC1A-206ENST00000470241 LAMTOR3Q9UHA4 124 aa6.16□□□□□ -1.42
SMC1A-206ENST00000470241 LST1O00453 97 aa6.14□□□□□ -1.43
SMC1A-206ENST00000470241 C9orf153Q5TBE3 101 aa6.14□□□□□ -1.43
SMC1A-206ENST00000470241 SSBP3-AS1Q7Z2R9 100 aa6.14□□□□□ -1.43
SMC1A-206ENST00000470241 Q8NBF4 154 aa6.14□□□□□ -1.43
SMC1A-206ENST00000470241 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
SMC1A-206ENST00000470241 H3BUT2 72 aa6.13□□□□□ -1.43
SMC1A-206ENST00000470241 OCIAD2Q56VL3 154 aa6.13□□□□□ -1.43
SMC1A-206ENST00000470241 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
SMC1A-206ENST00000470241 PPDPFLQ8WWR9 84 aa6.13□□□□□ -1.43
SMC1A-206ENST00000470241 TCL1BO95988 128 aa6.12□□□□□ -1.43
SMC1A-206ENST00000470241 TRACP01848 142 aa6.12□□□□□ -1.43
SMC1A-206ENST00000470241 DNAL4O96015 105 aa6.11□□□□□ -1.43
SMC1A-206ENST00000470241 COL5A1-AS1Q5SY13 56 aa6.11□□□□□ -1.43
SMC1A-206ENST00000470241 ORMDL1Q9P0S3 153 aa6.1□□□□□ -1.43
SMC1A-206ENST00000470241 A0A1W2PPM0 123 aa6.09□□□□□ -1.43
SMC1A-206ENST00000470241 GHRHP01286 108 aa6.09□□□□□ -1.43
SMC1A-206ENST00000470241 ATXN8Q156A1 80 aa6.09□□□□□ -1.43
SMC1A-206ENST00000470241 LYRM7Q5U5X0 104 aa6.09□□□□□ -1.43
SMC1A-206ENST00000470241 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
SMC1A-206ENST00000470241 IGLV8-61A0A075B6I0 122 aa6.08□□□□□ -1.44
SMC1A-206ENST00000470241 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
SMC1A-206ENST00000470241 F8WEM9 126 aa6.08□□□□□ -1.44
SMC1A-206ENST00000470241 FABP2P12104 132 aa6.08□□□□□ -1.44
SMC1A-206ENST00000470241 HMCN2Q8NDA2 5059 aa6.07□□□□□ -1.44
SMC1A-206ENST00000470241 TRBV20-1A0A075B6N2 111 aa6.07□□□□□ -1.44
SMC1A-206ENST00000470241 NDUFV3P56181 108 aaKnown RBP6.07□□□□□ -1.44
SMC1A-206ENST00000470241 C4orf48Q5BLP8 95 aa6.07□□□□□ -1.44
SMC1A-206ENST00000470241 H3BQ85 93 aa6.06□□□□□ -1.44
SMC1A-206ENST00000470241 TMEM256-PLSCR3K7ERE1 68 aa6.06□□□□□ -1.44
SMC1A-206ENST00000470241 SPINK1P00995 79 aa6.06□□□□□ -1.44
SMC1A-206ENST00000470241 BAALC-AS2P0C853 105 aa6.05□□□□□ -1.44
SMC1A-206ENST00000470241 Q6JHZ5 121 aa6.05□□□□□ -1.44
SMC1A-206ENST00000470241 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
SMC1A-206ENST00000470241 H3BMG7 143 aa6.04□□□□□ -1.44
SMC1A-206ENST00000470241 CD164Q04900 197 aa6.04□□□□□ -1.44
SMC1A-206ENST00000470241 UBE2V1Q13404 147 aa6.04□□□□□ -1.44
SMC1A-206ENST00000470241 HRCT1Q6UXD1 115 aa6.04□□□□□ -1.44
SMC1A-206ENST00000470241 RPS29P62273 56 aaKnown RBP6.03□□□□□ -1.44
SMC1A-206ENST00000470241 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
SMC1A-206ENST00000470241 C9JAW5 83 aa6.02□□□□□ -1.45
SMC1A-206ENST00000470241 A0A1B0GV72 72 aa6.01□□□□□ -1.45
SMC1A-206ENST00000470241 ANKRD29Q8N6D5 301 aa6.01□□□□□ -1.45
SMC1A-206ENST00000470241 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
SMC1A-206ENST00000470241 K7EP34 96 aa5.99□□□□□ -1.45
SMC1A-206ENST00000470241 TRBV7-7A0A0K0K1E9 115 aa5.98□□□□□ -1.45
SMC1A-206ENST00000470241 Q5XG85 94 aa5.98□□□□□ -1.45
SMC1A-206ENST00000470241 MTURNQ8N3F0 131 aa5.98□□□□□ -1.45
SMC1A-206ENST00000470241 LIMD2Q9BT23 127 aa5.98□□□□□ -1.45
SMC1A-206ENST00000470241 A0A1W2PNM2 257 aa5.97□□□□□ -1.45
SMC1A-206ENST00000470241 H3BT86 120 aa5.97□□□□□ -1.45
SMC1A-206ENST00000470241 PRR4Q16378 134 aa5.97□□□□□ -1.45
SMC1A-206ENST00000470241 Q6Q795 121 aa5.97□□□□□ -1.45
SMC1A-206ENST00000470241 TRBV7-4A0A0J9YYF1 115 aa5.96□□□□□ -1.46
SMC1A-206ENST00000470241 RBM3P98179 157 aaKnown RBP5.96□□□□□ -1.46
SMC1A-206ENST00000470241 TEN1Q86WV5 123 aa5.96□□□□□ -1.46
SMC1A-206ENST00000470241 SMCPP49901 116 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-206ENST00000470241 PRO0461Q9UI25 63 aa5.95□□□□□ -1.46
SMC1A-206ENST00000470241 LPAP08519 4548 aa5.94□□□□□ -1.46
SMC1A-206ENST00000470241 JMJD7-PLA2G4BH0Y9G9 81 aa5.94□□□□□ -1.46
SMC1A-206ENST00000470241 OBSCN-AS1Q96MR7 158 aa5.94□□□□□ -1.46
SMC1A-206ENST00000470241 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
SMC1A-206ENST00000470241 GTF2H5Q6ZYL4 71 aa5.93□□□□□ -1.46
SMC1A-206ENST00000470241 FP248Q71RG6 208 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-206ENST00000470241 DSCR8Q96T75 97 aa5.93□□□□□ -1.46
SMC1A-206ENST00000470241 A0A087WSZ3 146 aa5.92□□□□□ -1.46
SMC1A-206ENST00000470241 CCKP06307 115 aa5.92□□□□□ -1.46
SMC1A-206ENST00000470241 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
SMC1A-206ENST00000470241 C1orf195Q5TG92 126 aa5.92□□□□□ -1.46
SMC1A-206ENST00000470241 LOC110117498A0A087WWA1 95 aa5.91□□□□□ -1.46
SMC1A-206ENST00000470241 Q6ZQT0 140 aa5.91□□□□□ -1.46
SMC1A-206ENST00000470241 C14orf132Q9NPU4 83 aa5.91□□□□□ -1.46
SMC1A-206ENST00000470241 LRP2P98164 4655 aa5.9□□□□□ -1.47
SMC1A-206ENST00000470241 VPS25Q9BRG1 176 aa5.89□□□□□ -1.47
SMC1A-206ENST00000470241 SS18L2Q9UHA2 77 aa5.89□□□□□ -1.47
SMC1A-206ENST00000470241 PDE6GP18545 87 aa5.88□□□□□ -1.47
SMC1A-206ENST00000470241 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
SMC1A-206ENST00000470241 A0A1B0GV90 55 aa5.86□□□□□ -1.47
SMC1A-206ENST00000470241 F8W1H4 67 aa5.86□□□□□ -1.47
SMC1A-206ENST00000470241 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
SMC1A-206ENST00000470241 Q96NJ1 140 aa5.86□□□□□ -1.47
SMC1A-206ENST00000470241 A0A1B0GW54 56 aa5.83□□□□□ -1.48
SMC1A-206ENST00000470241 C21orf62-AS1Q17RA5 79 aa5.83□□□□□ -1.48
SMC1A-206ENST00000470241 LINC00472Q9H8W2 130 aa5.83□□□□□ -1.48
SMC1A-206ENST00000470241 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
SMC1A-206ENST00000470241 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
SMC1A-206ENST00000470241 ETDBQ3ZM63 59 aa5.81□□□□□ -1.48
SMC1A-206ENST00000470241 CDIP1Q9H305 208 aa5.81□□□□□ -1.48
SMC1A-206ENST00000470241 C9orf92A6NGG3 77 aa5.8□□□□□ -1.48
SMC1A-206ENST00000470241 DEFB116Q30KQ4 102 aa5.8□□□□□ -1.48
SMC1A-206ENST00000470241 IGKV4-1P06312 121 aa5.78□□□□□ -1.48
SMC1A-206ENST00000470241 XP32Q5T750 250 aa5.77□□□□□ -1.49
SMC1A-206ENST00000470241 SIGMAR1Q99720 223 aa5.77□□□□□ -1.49
SMC1A-206ENST00000470241 NREPQ16612 68 aa5.75□□□□□ -1.49
SMC1A-206ENST00000470241 J3KT08 172 aa5.74□□□□□ -1.49
SMC1A-206ENST00000470241 LINC00846Q9NV44 126 aa5.73□□□□□ -1.49
SMC1A-206ENST00000470241 DSCR10P59022 87 aa5.72□□□□□ -1.49
SMC1A-206ENST00000470241 Q6ZVQ6 151 aa5.72□□□□□ -1.49
SMC1A-206ENST00000470241 NOTCH2NLQ7Z3S9 236 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms