RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 FAT4Q6V0I7 4981 aa9.2□□□□□ -0.94
GTF3C2-209ENST00000470115 SPRR1BP22528 89 aa9.2□□□□□ -0.94
GTF3C2-209ENST00000470115 PSMB2P49721 201 aa9.2□□□□□ -0.94
GTF3C2-209ENST00000470115 DEFB105AQ8NG35 78 aa9.2□□□□□ -0.94
GTF3C2-209ENST00000470115 BATFQ16520 125 aa9.19□□□□□ -0.94
GTF3C2-209ENST00000470115 LINC00575Q6W349 94 aa9.18□□□□□ -0.94
GTF3C2-209ENST00000470115 hADV29S1A0JD25 119 aa9.17□□□□□ -0.94
GTF3C2-209ENST00000470115 H0YGX0 51 aa9.16□□□□□ -0.94
GTF3C2-209ENST00000470115 TRIAP1O43715 76 aa9.16□□□□□ -0.94
GTF3C2-209ENST00000470115 SNCGO76070 127 aa9.16□□□□□ -0.94
GTF3C2-209ENST00000470115 LAMTOR3Q9UHA4 124 aa9.16□□□□□ -0.94
GTF3C2-209ENST00000470115 COX6CP09669 75 aa9.14□□□□□ -0.95
GTF3C2-209ENST00000470115 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
GTF3C2-209ENST00000470115 HRCT1Q6UXD1 115 aa9.13□□□□□ -0.95
GTF3C2-209ENST00000470115 Q6ZQY7 126 aa9.13□□□□□ -0.95
GTF3C2-209ENST00000470115 SCGB1C2P0DMR2 95 aa9.11□□□□□ -0.95
GTF3C2-209ENST00000470115 ASB16-AS1Q495Z4 193 aa9.1□□□□□ -0.95
GTF3C2-209ENST00000470115 CLEC2BQ92478 149 aa9.1□□□□□ -0.95
GTF3C2-209ENST00000470115 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
GTF3C2-209ENST00000470115 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.09□□□□□ -0.95
GTF3C2-209ENST00000470115 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
GTF3C2-209ENST00000470115 LINC01547P58512 204 aaPredicted RBP9.08□□□□□ -0.96
GTF3C2-209ENST00000470115 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
GTF3C2-209ENST00000470115 PCP4L1A6NKN8 68 aa9.07□□□□□ -0.96
GTF3C2-209ENST00000470115 DNAL4O96015 105 aa9.07□□□□□ -0.96
GTF3C2-209ENST00000470115 SMIM29Q86T20 159 aa9.07□□□□□ -0.96
GTF3C2-209ENST00000470115 NAA38Q9BRA0 125 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-209ENST00000470115 LIMD2Q9BT23 127 aa9.07□□□□□ -0.96
GTF3C2-209ENST00000470115 SEC61BP60468 96 aaKnown RBP9.06□□□□□ -0.96
GTF3C2-209ENST00000470115 A0A1B0GX51 115 aa9.05□□□□□ -0.96
GTF3C2-209ENST00000470115 F8WEM9 126 aa9.05□□□□□ -0.96
GTF3C2-209ENST00000470115 CD164Q04900 197 aa9.04□□□□□ -0.96
GTF3C2-209ENST00000470115 XP32Q5T750 250 aa9.04□□□□□ -0.96
GTF3C2-209ENST00000470115 SNHG12Q9BXW3 62 aa9.04□□□□□ -0.96
GTF3C2-209ENST00000470115 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
GTF3C2-209ENST00000470115 OCIAD2Q56VL3 154 aa9.03□□□□□ -0.96
GTF3C2-209ENST00000470115 A0A0G2JQZ4 141 aa9.02□□□□□ -0.97
GTF3C2-209ENST00000470115 GHRHP01286 108 aa9.01□□□□□ -0.97
GTF3C2-209ENST00000470115 H3BUT2 72 aa9□□□□□ -0.97
GTF3C2-209ENST00000470115 FABP2P12104 132 aa9□□□□□ -0.97
GTF3C2-209ENST00000470115 PPDPFLQ8WWR9 84 aa9□□□□□ -0.97
GTF3C2-209ENST00000470115 LYRM7Q5U5X0 104 aa8.99□□□□□ -0.97
GTF3C2-209ENST00000470115 ORMDL1Q9P0S3 153 aa8.99□□□□□ -0.97
GTF3C2-209ENST00000470115 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
GTF3C2-209ENST00000470115 LST1O00453 97 aa8.98□□□□□ -0.97
GTF3C2-209ENST00000470115 TRACP01848 142 aa8.97□□□□□ -0.97
GTF3C2-209ENST00000470115 C9orf118A6NHY6 69 aa8.96□□□□□ -0.98
GTF3C2-209ENST00000470115 TAX1BP3O14907 124 aa8.96□□□□□ -0.98
GTF3C2-209ENST00000470115 TCL1BO95988 128 aa8.96□□□□□ -0.98
GTF3C2-209ENST00000470115 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
GTF3C2-209ENST00000470115 Q5XG85 94 aa8.96□□□□□ -0.98
GTF3C2-209ENST00000470115 C1orf195Q5TG92 126 aa8.95□□□□□ -0.98
GTF3C2-209ENST00000470115 NDUFV3P56181 108 aaKnown RBP8.94□□□□□ -0.98
GTF3C2-209ENST00000470115 COL5A1-AS1Q5SY13 56 aa8.94□□□□□ -0.98
GTF3C2-209ENST00000470115 H3BQ85 93 aa8.93□□□□□ -0.98
GTF3C2-209ENST00000470115 A0A1B0GV72 72 aa8.92□□□□□ -0.98
GTF3C2-209ENST00000470115 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
GTF3C2-209ENST00000470115 A0A1W2PPM0 123 aa8.91□□□□□ -0.98
GTF3C2-209ENST00000470115 Q6JHZ5 121 aa8.91□□□□□ -0.98
GTF3C2-209ENST00000470115 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
GTF3C2-209ENST00000470115 H3BMG7 143 aa8.9□□□□□ -0.98
GTF3C2-209ENST00000470115 PCOTHQ58A44 107 aa8.9□□□□□ -0.98
GTF3C2-209ENST00000470115 IGFL1Q6UW32 110 aa8.89□□□□□ -0.99
GTF3C2-209ENST00000470115 KRTAP9-2Q9BYQ4 174 aa8.89□□□□□ -0.99
GTF3C2-209ENST00000470115 IGLV8-61A0A075B6I0 122 aa8.88□□□□□ -0.99
GTF3C2-209ENST00000470115 BAALC-AS2P0C853 105 aa8.88□□□□□ -0.99
GTF3C2-209ENST00000470115 C9JAW5 83 aa8.85□□□□□ -0.99
GTF3C2-209ENST00000470115 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
GTF3C2-209ENST00000470115 ANKRD29Q8N6D5 301 aa8.85□□□□□ -0.99
GTF3C2-209ENST00000470115 SPCS1Q9Y6A9 102 aa8.84□□□□□ -0.99
GTF3C2-209ENST00000470115 TRBV7-7A0A0K0K1E9 115 aa8.81□□□□□ -1
GTF3C2-209ENST00000470115 LCE2CQ5TA81 110 aa8.8□□□□□ -1
GTF3C2-209ENST00000470115 MTURNQ8N3F0 131 aa8.8□□□□□ -1
GTF3C2-209ENST00000470115 RBM3P98179 157 aaKnown RBP8.79□□□□□ -1
GTF3C2-209ENST00000470115 TEN1Q86WV5 123 aa8.78□□□□□ -1
GTF3C2-209ENST00000470115 DSCR8Q96T75 97 aa8.78□□□□□ -1
GTF3C2-209ENST00000470115 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
GTF3C2-209ENST00000470115 KRTAP19-2Q3LHN2 52 aa8.77□□□□□ -1.01
GTF3C2-209ENST00000470115 VPS25Q9BRG1 176 aa8.77□□□□□ -1.01
GTF3C2-209ENST00000470115 JMJD7-PLA2G4BH0Y9G9 81 aa8.75□□□□□ -1.01
GTF3C2-209ENST00000470115 H3BT86 120 aa8.74□□□□□ -1.01
GTF3C2-209ENST00000470115 K7EP34 96 aa8.74□□□□□ -1.01
GTF3C2-209ENST00000470115 CCKP06307 115 aa8.74□□□□□ -1.01
GTF3C2-209ENST00000470115 Q6Q795 121 aa8.74□□□□□ -1.01
GTF3C2-209ENST00000470115 A0A087WSZ3 146 aa8.73□□□□□ -1.01
GTF3C2-209ENST00000470115 A0A1W2PNM2 257 aa8.73□□□□□ -1.01
GTF3C2-209ENST00000470115 SS18L2Q9UHA2 77 aa8.73□□□□□ -1.01
GTF3C2-209ENST00000470115 TRBV7-4A0A0J9YYF1 115 aa8.72□□□□□ -1.01
GTF3C2-209ENST00000470115 GTF2H5Q6ZYL4 71 aa8.72□□□□□ -1.01
GTF3C2-209ENST00000470115 C14orf132Q9NPU4 83 aa8.7□□□□□ -1.02
GTF3C2-209ENST00000470115 OBSCN-AS1Q96MR7 158 aa8.69□□□□□ -1.02
GTF3C2-209ENST00000470115 MT1HP80294 61 aa8.68□□□□□ -1.02
GTF3C2-209ENST00000470115 LOC110117498A0A087WWA1 95 aa8.65□□□□□ -1.02
GTF3C2-209ENST00000470115 PDE6GP18545 87 aa8.65□□□□□ -1.02
GTF3C2-209ENST00000470115 Q6ZQT0 140 aa8.65□□□□□ -1.02
GTF3C2-209ENST00000470115 SMCPP49901 116 aaPredicted RBP8.63□□□□□ -1.03
GTF3C2-209ENST00000470115 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
GTF3C2-209ENST00000470115 Q75L30 129 aa8.61□□□□□ -1.03
GTF3C2-209ENST00000470115 Q96NJ1 140 aa8.61□□□□□ -1.03
GTF3C2-209ENST00000470115 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms