RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 USMG5Q96IX5 58 aa0.71□□□□□ -2.3
BRCA2-202ENST00000470094 MRPL34Q9BQ48 92 aaKnown RBP0.71□□□□□ -2.3
BRCA2-202ENST00000470094 DSPP15924 2871 aaKnown RBP0.71□□□□□ -2.3
BRCA2-202ENST00000470094 PCNX1Q96RV3 2341 aa0.7□□□□□ -2.3
BRCA2-202ENST00000470094 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
BRCA2-202ENST00000470094 M0QY20 66 aa0.7□□□□□ -2.3
BRCA2-202ENST00000470094 DEFB131AP59861 70 aa0.7□□□□□ -2.3
BRCA2-202ENST00000470094 RPL39P62891 51 aaKnown RBP0.7□□□□□ -2.3
BRCA2-202ENST00000470094 PRCDQ00LT1 54 aa0.7□□□□□ -2.3
BRCA2-202ENST00000470094 COX6A2Q02221 97 aa0.7□□□□□ -2.3
BRCA2-202ENST00000470094 MGAQ8IWI9 3026 aa0.7□□□□□ -2.3
BRCA2-202ENST00000470094 IGF2RP11717 2491 aa0.7□□□□□ -2.3
BRCA2-202ENST00000470094 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
BRCA2-202ENST00000470094 K7EIM0 57 aa0.69□□□□□ -2.3
BRCA2-202ENST00000470094 RPS27P42677 84 aaKnown RBP0.69□□□□□ -2.3
BRCA2-202ENST00000470094 KLK9Q2XQG4 91 aa0.69□□□□□ -2.3
BRCA2-202ENST00000470094 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
BRCA2-202ENST00000470094 C6orf48Q9UBA6 75 aa0.69□□□□□ -2.3
BRCA2-202ENST00000470094 JMJD1CQ15652 2540 aa0.69□□□□□ -2.3
BRCA2-202ENST00000470094 UBR5O95071 2799 aaPredicted RBP0.68□□□□□ -2.3
BRCA2-202ENST00000470094 MINOS1Q5TGZ0 78 aa0.68□□□□□ -2.3
BRCA2-202ENST00000470094 UBE2DNLQ8IWF7 75 aa0.68□□□□□ -2.3
BRCA2-202ENST00000470094 RPL39LQ96EH5 51 aaKnown RBP0.68□□□□□ -2.3
BRCA2-202ENST00000470094 VWFP04275 2813 aa0.68□□□□□ -2.3
BRCA2-202ENST00000470094 ZNF462Q96JM2 2506 aa0.68□□□□□ -2.3
BRCA2-202ENST00000470094 C2CD3Q4AC94 2353 aa0.67□□□□□ -2.3
BRCA2-202ENST00000470094 DEFB109BQ30KR1 87 aa0.67□□□□□ -2.3
BRCA2-202ENST00000470094 H1FX-AS1Q4G0G2 97 aa0.67□□□□□ -2.3
BRCA2-202ENST00000470094 Q5VSD8 79 aa0.67□□□□□ -2.3
BRCA2-202ENST00000470094 TTTY10Q9BZA0 68 aa0.67□□□□□ -2.3
BRCA2-202ENST00000470094 PRRC2CQ9Y520 2896 aaKnown RBP0.67□□□□□ -2.3
BRCA2-202ENST00000470094 TENM2Q9NT68 2774 aa0.67□□□□□ -2.3
BRCA2-202ENST00000470094 MMP24-AS1A0A0U1RRL7 71 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 DEFB130BP0DP73 79 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 DEFB130AP0DP74 79 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 WT1-ASQ06250 92 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 PIGYQ3MUY2 71 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 CLPSL2Q6UWE3 100 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 TMEM167AQ8TBQ9 72 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 VPS13DQ5THJ4 4388 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
BRCA2-202ENST00000470094 H3BUA1 57 aa0.65□□□□□ -2.31
BRCA2-202ENST00000470094 SPRR1AP35321 89 aa0.65□□□□□ -2.31
BRCA2-202ENST00000470094 CELSR2Q9HCU4 2923 aa0.65□□□□□ -2.31
BRCA2-202ENST00000470094 TRANK1O15050 2925 aa0.65□□□□□ -2.31
BRCA2-202ENST00000470094 WFDC13Q8IUB5 93 aa0.64□□□□□ -2.31
BRCA2-202ENST00000470094 SRRM2Q9UQ35 2752 aaKnown RBP0.64□□□□□ -2.31
BRCA2-202ENST00000470094 CELSR1Q9NYQ6 3014 aa0.63□□□□□ -2.31
BRCA2-202ENST00000470094 ACACAQ13085 2346 aa0.63□□□□□ -2.31
BRCA2-202ENST00000470094 H3BSH0 61 aa0.63□□□□□ -2.31
BRCA2-202ENST00000470094 TNRC18O15417 2968 aaPredicted RBP0.63□□□□□ -2.31
BRCA2-202ENST00000470094 SPRR1BP22528 89 aa0.63□□□□□ -2.31
BRCA2-202ENST00000470094 LELP1Q5T871 98 aa0.63□□□□□ -2.31
BRCA2-202ENST00000470094 DEFB106AQ8N104 65 aa0.63□□□□□ -2.31
BRCA2-202ENST00000470094 LEAP2Q969E1 77 aa0.63□□□□□ -2.31
BRCA2-202ENST00000470094 SPTA1P02549 2419 aa0.63□□□□□ -2.31
BRCA2-202ENST00000470094 SPTBN2O15020 2390 aa0.62□□□□□ -2.31
BRCA2-202ENST00000470094 WFDC10BQ8IUB3 73 aa0.62□□□□□ -2.31
BRCA2-202ENST00000470094 PRKDCP78527 4128 aaKnown RBP0.62□□□□□ -2.31
BRCA2-202ENST00000470094 SPTBN1Q01082 2364 aaKnown RBP0.61□□□□□ -2.31
BRCA2-202ENST00000470094 CHD9Q3L8U1 2897 aa0.61□□□□□ -2.31
BRCA2-202ENST00000470094 FRYQ5TBA9 3013 aa0.61□□□□□ -2.31
BRCA2-202ENST00000470094 GPR98Q8WXG9 6306 aa0.61□□□□□ -2.31
BRCA2-202ENST00000470094 A8MTW9 85 aa0.61□□□□□ -2.31
BRCA2-202ENST00000470094 KAAG1Q9UBP8 84 aa0.61□□□□□ -2.31
BRCA2-202ENST00000470094 ZNF292O60281 2723 aa0.61□□□□□ -2.31
BRCA2-202ENST00000470094 ABCA12Q86UK0 2595 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 COL6A3P12111 3177 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 DCHS2Q6V1P9 2916 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 WNK1Q9H4A3 2382 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 NBPF19A0A087WUL8 3843 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 S4R3F8 94 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 CREBBPQ92793 2442 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 AKAP6Q13023 2319 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 CACNA1HO95180 2353 aa0.6□□□□□ -2.31
BRCA2-202ENST00000470094 GVINP1Q7Z2Y8 2422 aa0.59□□□□□ -2.31
BRCA2-202ENST00000470094 DYNC2H1Q8NCM8 4307 aaKnown RBP0.59□□□□□ -2.31
BRCA2-202ENST00000470094 RPL39P5Q59GN2 51 aa0.59□□□□□ -2.31
BRCA2-202ENST00000470094 DEFB105AQ8NG35 78 aa0.59□□□□□ -2.31
BRCA2-202ENST00000470094 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
BRCA2-202ENST00000470094 DNAH11Q96DT5 4516 aa0.59□□□□□ -2.32
BRCA2-202ENST00000470094 ABCA2Q9BZC7 2435 aa0.59□□□□□ -2.32
BRCA2-202ENST00000470094 BSNQ9UPA5 3926 aa0.59□□□□□ -2.32
BRCA2-202ENST00000470094 RANBP2P49792 3224 aaKnown RBP0.59□□□□□ -2.32
BRCA2-202ENST00000470094 DNAH8Q96JB1 4490 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 SACSQ9NZJ4 4579 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 NOP10Q9NPE3 64 aaKnown RBP0.58□□□□□ -2.32
BRCA2-202ENST00000470094 APLNQ9ULZ1 77 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 NBEAQ8NFP9 2946 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
BRCA2-202ENST00000470094 SPTBN4Q9H254 2564 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 COL6A5A8TX70 2615 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 NAV2Q8IVL1 2488 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 LRBAP50851 2863 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 CSMD3Q7Z407 3707 aa0.58□□□□□ -2.32
BRCA2-202ENST00000470094 PKD1L2Q7Z442 2459 aa0.57□□□□□ -2.32
BRCA2-202ENST00000470094 CEP350Q5VT06 3117 aa0.57□□□□□ -2.32
BRCA2-202ENST00000470094 APC2O95996 2303 aa0.57□□□□□ -2.32
BRCA2-202ENST00000470094 PRLHP81277 87 aa0.57□□□□□ -2.32
BRCA2-202ENST00000470094 DNAH12Q6ZR08 3092 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms