RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 TRBV7-6A0A0J9YX20 115 aa5.8□□□□□ -1.48
LSM2-209ENST00000470083 HRES1P13985 223 aa5.8□□□□□ -1.48
LSM2-209ENST00000470083 A0A0J9YXY3 114 aa5.78□□□□□ -1.48
LSM2-209ENST00000470083 KRTAP16-1A8MUX0 517 aa5.78□□□□□ -1.48
LSM2-209ENST00000470083 F8WEM9 126 aa5.78□□□□□ -1.48
LSM2-209ENST00000470083 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
LSM2-209ENST00000470083 LINC00308Q8TCZ7 52 aa5.78□□□□□ -1.48
LSM2-209ENST00000470083 A0A1B0GWB2 263 aa5.77□□□□□ -1.49
LSM2-209ENST00000470083 HERVK_113P61574 105 aa5.77□□□□□ -1.49
LSM2-209ENST00000470083 CLEC2BQ92478 149 aa5.77□□□□□ -1.49
LSM2-209ENST00000470083 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
LSM2-209ENST00000470083 PLNP26678 52 aa5.76□□□□□ -1.49
LSM2-209ENST00000470083 Q6JHZ5 121 aa5.76□□□□□ -1.49
LSM2-209ENST00000470083 Q6ZVH6 145 aa5.76□□□□□ -1.49
LSM2-209ENST00000470083 TRAPPC1Q9Y5R8 145 aa5.76□□□□□ -1.49
LSM2-209ENST00000470083 A8MWP4 228 aa5.75□□□□□ -1.49
LSM2-209ENST00000470083 H0Y8G0 127 aa5.75□□□□□ -1.49
LSM2-209ENST00000470083 LST1O00453 97 aa5.75□□□□□ -1.49
LSM2-209ENST00000470083 CHCHD1Q96BP2 118 aaKnown RBP5.75□□□□□ -1.49
LSM2-209ENST00000470083 LINC00518Q8N0U6 118 aa5.74□□□□□ -1.49
LSM2-209ENST00000470083 LITAFQ99732 161 aa5.74□□□□□ -1.49
LSM2-209ENST00000470083 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
LSM2-209ENST00000470083 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
LSM2-209ENST00000470083 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
LSM2-209ENST00000470083 S100A6P06703 90 aa5.72□□□□□ -1.49
LSM2-209ENST00000470083 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
LSM2-209ENST00000470083 ZNF815PA8K554 130 aa5.71□□□□□ -1.5
LSM2-209ENST00000470083 MTURNQ8N3F0 131 aa5.71□□□□□ -1.5
LSM2-209ENST00000470083 NHP2Q9NX24 153 aaKnown RBP5.71□□□□□ -1.5
LSM2-209ENST00000470083 TIMM17BO60830 172 aa5.7□□□□□ -1.5
LSM2-209ENST00000470083 DPM2O94777 84 aa5.7□□□□□ -1.5
LSM2-209ENST00000470083 TRAV13-2A0A0B4J235 113 aa5.69□□□□□ -1.5
LSM2-209ENST00000470083 TMEM218A2RU14 115 aa5.69□□□□□ -1.5
LSM2-209ENST00000470083 A6NN06 94 aa5.67□□□□□ -1.5
LSM2-209ENST00000470083 E9PLD3 99 aa5.67□□□□□ -1.5
LSM2-209ENST00000470083 HSBP1O75506 76 aa5.67□□□□□ -1.5
LSM2-209ENST00000470083 IGKCP01834 107 aa5.67□□□□□ -1.5
LSM2-209ENST00000470083 DSCR10P59022 87 aa5.67□□□□□ -1.5
LSM2-209ENST00000470083 PMCHL2Q9BQD1 86 aa5.67□□□□□ -1.5
LSM2-209ENST00000470083 OCIAD2Q56VL3 154 aa5.66□□□□□ -1.5
LSM2-209ENST00000470083 SS18L2Q9UHA2 77 aa5.66□□□□□ -1.5
LSM2-209ENST00000470083 LEPROTL1O95214 131 aa5.65□□□□□ -1.5
LSM2-209ENST00000470083 UQCC3Q6UW78 93 aa5.65□□□□□ -1.5
LSM2-209ENST00000470083 SLC7A5P1Q8MH63 180 aa5.65□□□□□ -1.5
LSM2-209ENST00000470083 SERF1AO75920 110 aa5.64□□□□□ -1.51
LSM2-209ENST00000470083 A6NDN8 102 aa5.63□□□□□ -1.51
LSM2-209ENST00000470083 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
LSM2-209ENST00000470083 Q6ZQY7 126 aa5.61□□□□□ -1.51
LSM2-209ENST00000470083 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
LSM2-209ENST00000470083 HSPB8Q9UJY1 196 aa5.6□□□□□ -1.51
LSM2-209ENST00000470083 HSBP1L1C9JCN9 74 aa5.59□□□□□ -1.51
LSM2-209ENST00000470083 LINC00313P59037 77 aa5.59□□□□□ -1.51
LSM2-209ENST00000470083 CLLU1Q5K131 121 aa5.59□□□□□ -1.51
LSM2-209ENST00000470083 SMIM11BQ8TCY0 68 aa5.59□□□□□ -1.51
LSM2-209ENST00000470083 C9orf118A6NHY6 69 aa5.58□□□□□ -1.52
LSM2-209ENST00000470083 H3BUT2 72 aa5.58□□□□□ -1.52
LSM2-209ENST00000470083 LINC00575Q6W349 94 aa5.58□□□□□ -1.52
LSM2-209ENST00000470083 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
LSM2-209ENST00000470083 COLCA2A8K830 154 aa5.57□□□□□ -1.52
LSM2-209ENST00000470083 hADV29S1A0JD25 119 aa5.56□□□□□ -1.52
LSM2-209ENST00000470083 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
LSM2-209ENST00000470083 SIGMAR1Q99720 223 aa5.56□□□□□ -1.52
LSM2-209ENST00000470083 FABP4P15090 132 aa5.55□□□□□ -1.52
LSM2-209ENST00000470083 VAMP3Q15836 100 aa5.55□□□□□ -1.52
LSM2-209ENST00000470083 PPDPFLQ8WWR9 84 aa5.55□□□□□ -1.52
LSM2-209ENST00000470083 A0A087WSZ3 146 aa5.54□□□□□ -1.52
LSM2-209ENST00000470083 IFITM1P13164 125 aa5.54□□□□□ -1.52
LSM2-209ENST00000470083 TEN1Q86WV5 123 aa5.54□□□□□ -1.52
LSM2-209ENST00000470083 SNHG12Q9BXW3 62 aa5.54□□□□□ -1.52
LSM2-209ENST00000470083 TTTY13Q9BZ97 58 aa5.54□□□□□ -1.52
LSM2-209ENST00000470083 GPR98Q8WXG9 6306 aa5.53□□□□□ -1.52
LSM2-209ENST00000470083 PCP4P48539 62 aa5.53□□□□□ -1.52
LSM2-209ENST00000470083 SPINK7P58062 85 aa5.53□□□□□ -1.52
LSM2-209ENST00000470083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.52□□□□□ -1.53
LSM2-209ENST00000470083 KRTAP2-2Q9BYT5 123 aa5.52□□□□□ -1.53
LSM2-209ENST00000470083 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
LSM2-209ENST00000470083 MT1BP07438 61 aa5.51□□□□□ -1.53
LSM2-209ENST00000470083 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
LSM2-209ENST00000470083 A0A1W2PNM2 257 aa5.49□□□□□ -1.53
LSM2-209ENST00000470083 SCGB1D4Q6XE38 83 aa5.49□□□□□ -1.53
LSM2-209ENST00000470083 FAM218AQ96MZ4 157 aa5.49□□□□□ -1.53
LSM2-209ENST00000470083 WFDC13Q8IUB5 93 aa5.48□□□□□ -1.53
LSM2-209ENST00000470083 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
LSM2-209ENST00000470083 YPEL4Q96NS1 127 aa5.48□□□□□ -1.53
LSM2-209ENST00000470083 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
LSM2-209ENST00000470083 Q5VV11 94 aa5.47□□□□□ -1.53
LSM2-209ENST00000470083 ZCCHC13Q8WW36 166 aaKnown RBP5.47□□□□□ -1.53
LSM2-209ENST00000470083 SPRR2EP22531 72 aa5.46□□□□□ -1.54
LSM2-209ENST00000470083 SPRR2BP35325 72 aa5.46□□□□□ -1.54
LSM2-209ENST00000470083 SPRR2AP35326 72 aa5.46□□□□□ -1.54
LSM2-209ENST00000470083 SYS1-DBNDD2H3BUS1 97 aa5.44□□□□□ -1.54
LSM2-209ENST00000470083 LINC01545Q5VT33 79 aa5.43□□□□□ -1.54
LSM2-209ENST00000470083 IGHV6-1A0A0B4J1U7 121 aa5.42□□□□□ -1.54
LSM2-209ENST00000470083 TRGC2P03986 189 aa5.42□□□□□ -1.54
LSM2-209ENST00000470083 SNAPINO95295 136 aa5.41□□□□□ -1.54
LSM2-209ENST00000470083 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
LSM2-209ENST00000470083 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
LSM2-209ENST00000470083 APOC3P02656 99 aa5.4□□□□□ -1.54
LSM2-209ENST00000470083 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.54
LSM2-209ENST00000470083 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms