RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 OCR1Q9BZK8 76 aa4.21□□□□□ -1.74
CD46-212ENST00000469535 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
CD46-212ENST00000469535 FP248Q71RG6 208 aaPredicted RBP4.2□□□□□ -1.74
CD46-212ENST00000469535 SPRR1AP35321 89 aa4.19□□□□□ -1.74
CD46-212ENST00000469535 CEP350Q5VT06 3117 aa4.19□□□□□ -1.74
CD46-212ENST00000469535 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
CD46-212ENST00000469535 CFAP46Q8IYW2 2715 aa4.19□□□□□ -1.74
CD46-212ENST00000469535 C5orf42Q9H799 3197 aa4.18□□□□□ -1.74
CD46-212ENST00000469535 PANO1I0J062 215 aa4.18□□□□□ -1.74
CD46-212ENST00000469535 LINC00472Q9H8W2 130 aa4.16□□□□□ -1.74
CD46-212ENST00000469535 PRRC2CQ9Y520 2896 aaKnown RBP4.16□□□□□ -1.74
CD46-212ENST00000469535 SPRR1BP22528 89 aa4.15□□□□□ -1.74
CD46-212ENST00000469535 A0A087X002 238 aa4.15□□□□□ -1.75
CD46-212ENST00000469535 Q6ZR54 194 aa4.15□□□□□ -1.75
CD46-212ENST00000469535 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
CD46-212ENST00000469535 KRTAP26-1Q6PEX3 210 aa4.13□□□□□ -1.75
CD46-212ENST00000469535 KRTAP21-3Q3LHN1 58 aa4.13□□□□□ -1.75
CD46-212ENST00000469535 STAB1Q9NY15 2570 aa4.11□□□□□ -1.75
CD46-212ENST00000469535 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
CD46-212ENST00000469535 Q75L30 129 aa4.11□□□□□ -1.75
CD46-212ENST00000469535 H3BS24 57 aa4.1□□□□□ -1.75
CD46-212ENST00000469535 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
CD46-212ENST00000469535 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.75
CD46-212ENST00000469535 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
CD46-212ENST00000469535 C20orf166-AS1Q96NR2 134 aa4.08□□□□□ -1.76
CD46-212ENST00000469535 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
CD46-212ENST00000469535 TEP1Q99973 2627 aaKnown RBP4.08□□□□□ -1.76
CD46-212ENST00000469535 BAHCC1Q9P281 2608 aa4.08□□□□□ -1.76
CD46-212ENST00000469535 SETXQ7Z333 2677 aaKnown RBP4.08□□□□□ -1.76
CD46-212ENST00000469535 TEX15Q9BXT5 2789 aa4.08□□□□□ -1.76
CD46-212ENST00000469535 ROMO1P60602 79 aa4.07□□□□□ -1.76
CD46-212ENST00000469535 A8MUU9 505 aa4.04□□□□□ -1.76
CD46-212ENST00000469535 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
CD46-212ENST00000469535 CHD7Q9P2D1 2997 aa4.03□□□□□ -1.76
CD46-212ENST00000469535 CHD9Q3L8U1 2897 aa4.03□□□□□ -1.76
CD46-212ENST00000469535 KRTAP11-1Q8IUC1 163 aa4.02□□□□□ -1.77
CD46-212ENST00000469535 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
CD46-212ENST00000469535 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
CD46-212ENST00000469535 Q5VV11 94 aa4□□□□□ -1.77
CD46-212ENST00000469535 NBEAL1Q6ZS30 2694 aa3.99□□□□□ -1.77
CD46-212ENST00000469535 CHD6Q8TD26 2715 aa3.99□□□□□ -1.77
CD46-212ENST00000469535 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
CD46-212ENST00000469535 AKAP13Q12802 2813 aa3.99□□□□□ -1.77
CD46-212ENST00000469535 PCNTO95613 3336 aa3.99□□□□□ -1.77
CD46-212ENST00000469535 CENPEQ02224 2701 aa3.98□□□□□ -1.77
CD46-212ENST00000469535 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
CD46-212ENST00000469535 MGAQ8IWI9 3026 aa3.98□□□□□ -1.77
CD46-212ENST00000469535 KRTAP13-2Q52LG2 175 aa3.97□□□□□ -1.77
CD46-212ENST00000469535 A0A1B0GVY2 172 aa3.97□□□□□ -1.77
CD46-212ENST00000469535 COL6A5A8TX70 2615 aa3.97□□□□□ -1.77
CD46-212ENST00000469535 CYSTM1Q9H1C7 97 aa3.97□□□□□ -1.77
CD46-212ENST00000469535 ZNF292O60281 2723 aa3.96□□□□□ -1.78
CD46-212ENST00000469535 UNC79Q9P2D8 2635 aa3.95□□□□□ -1.78
CD46-212ENST00000469535 MKI67P46013 3256 aaKnown RBP3.95□□□□□ -1.78
CD46-212ENST00000469535 CFAP54Q96N23 3096 aa3.94□□□□□ -1.78
CD46-212ENST00000469535 A8MU10 97 aa3.93□□□□□ -1.78
CD46-212ENST00000469535 DMBT1Q9UGM3 2413 aaPredicted RBP3.93□□□□□ -1.78
CD46-212ENST00000469535 A0A0C4DFX4 3053 aa3.93□□□□□ -1.78
CD46-212ENST00000469535 ASB16-AS1Q495Z4 193 aa3.92□□□□□ -1.78
CD46-212ENST00000469535 LAMA3Q16787 3333 aa3.92□□□□□ -1.78
CD46-212ENST00000469535 KRTAP29-1A8MX34 341 aaPredicted RBP3.91□□□□□ -1.78
CD46-212ENST00000469535 RANBP2P49792 3224 aaKnown RBP3.9□□□□□ -1.78
CD46-212ENST00000469535 Q5XG85 94 aa3.9□□□□□ -1.78
CD46-212ENST00000469535 KRTAP10-8P60410 259 aa3.9□□□□□ -1.79
CD46-212ENST00000469535 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.79
CD46-212ENST00000469535 TNP1P09430 55 aa3.89□□□□□ -1.79
CD46-212ENST00000469535 FRYQ5TBA9 3013 aa3.88□□□□□ -1.79
CD46-212ENST00000469535 TRANK1O15050 2925 aa3.88□□□□□ -1.79
CD46-212ENST00000469535 HTTP42858 3142 aa3.88□□□□□ -1.79
CD46-212ENST00000469535 PRUNE2Q8WUY3 3088 aa3.88□□□□□ -1.79
CD46-212ENST00000469535 WDFY4Q6ZS81 3184 aa3.87□□□□□ -1.79
CD46-212ENST00000469535 GCN1Q92616 2671 aaKnown RBP3.86□□□□□ -1.79
CD46-212ENST00000469535 ITPR2Q14571 2701 aa3.86□□□□□ -1.79
CD46-212ENST00000469535 BRCA2P51587 3418 aa3.86□□□□□ -1.79
CD46-212ENST00000469535 NOTCH1P46531 2555 aa3.86□□□□□ -1.79
CD46-212ENST00000469535 STAB2Q8WWQ8 2551 aa3.86□□□□□ -1.79
CD46-212ENST00000469535 KRTAP10-10P60014 251 aa3.85□□□□□ -1.79
CD46-212ENST00000469535 IGSF10Q6WRI0 2623 aa3.85□□□□□ -1.79
CD46-212ENST00000469535 KRTAP13-1Q8IUC0 172 aa3.85□□□□□ -1.79
CD46-212ENST00000469535 XIRP2A4UGR9 3374 aa3.84□□□□□ -1.79
CD46-212ENST00000469535 TRIOO75962 3097 aa3.84□□□□□ -1.79
CD46-212ENST00000469535 CRYBG3Q68DQ2 2970 aa3.84□□□□□ -1.79
CD46-212ENST00000469535 DSPP15924 2871 aaKnown RBP3.83□□□□□ -1.8
CD46-212ENST00000469535 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
CD46-212ENST00000469535 XP32Q5T750 250 aa3.83□□□□□ -1.8
CD46-212ENST00000469535 NBEAL2Q6ZNJ1 2754 aa3.82□□□□□ -1.8
CD46-212ENST00000469535 UNC80Q8N2C7 3258 aa3.81□□□□□ -1.8
CD46-212ENST00000469535 LAMA2P24043 3122 aaKnown RBP3.79□□□□□ -1.8
CD46-212ENST00000469535 CELSR3Q9NYQ7 3312 aa3.78□□□□□ -1.8
CD46-212ENST00000469535 UBR5O95071 2799 aaPredicted RBP3.78□□□□□ -1.81
CD46-212ENST00000469535 REV3LO60673 3130 aa3.78□□□□□ -1.81
CD46-212ENST00000469535 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
CD46-212ENST00000469535 CDH23Q9H251 3354 aa3.76□□□□□ -1.81
CD46-212ENST00000469535 KMT2BQ9UMN6 2715 aaPredicted RBP3.76□□□□□ -1.81
CD46-212ENST00000469535 NSD1Q96L73 2696 aaPredicted RBP3.76□□□□□ -1.81
CD46-212ENST00000469535 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
CD46-212ENST00000469535 PRO2289Q9P1D8 64 aa3.75□□□□□ -1.81
CD46-212ENST00000469535 KRTAP1-4P0C5Y4 121 aa3.74□□□□□ -1.81
CD46-212ENST00000469535 MAP1AP78559 2803 aaPredicted RBP3.74□□□□□ -1.81
CD46-212ENST00000469535 FREM2Q5SZK8 3169 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms