RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
LIMS2-213ENST00000469300 ASH1LQ9NR48 2969 aaKnown RBP9.78□□□□□ -0.84
LIMS2-213ENST00000469300 IGLV5-37A0A075B6J1 123 aa9.76□□□□□ -0.85
LIMS2-213ENST00000469300 SPINT4Q6UDR6 99 aa9.76□□□□□ -0.85
LIMS2-213ENST00000469300 SETXQ7Z333 2677 aaKnown RBP9.76□□□□□ -0.85
LIMS2-213ENST00000469300 IGLV7-43P04211 117 aa9.76□□□□□ -0.85
LIMS2-213ENST00000469300 LINC00304Q8N9R0 145 aa9.75□□□□□ -0.85
LIMS2-213ENST00000469300 COL6A5A8TX70 2615 aa9.75□□□□□ -0.85
LIMS2-213ENST00000469300 UQCR11O14957 56 aa9.75□□□□□ -0.85
LIMS2-213ENST00000469300 IGFL1Q6UW32 110 aa9.74□□□□□ -0.85
LIMS2-213ENST00000469300 Q8N377 158 aa9.74□□□□□ -0.85
LIMS2-213ENST00000469300 CASC10Q5T4H9 136 aa9.74□□□□□ -0.85
LIMS2-213ENST00000469300 A0A1W2PNN7 141 aa9.73□□□□□ -0.85
LIMS2-213ENST00000469300 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
LIMS2-213ENST00000469300 MRPL34Q9BQ48 92 aaKnown RBP9.72□□□□□ -0.85
LIMS2-213ENST00000469300 LINC01600Q96MT4 127 aa9.71□□□□□ -0.85
LIMS2-213ENST00000469300 Q96NJ1 140 aa9.71□□□□□ -0.85
LIMS2-213ENST00000469300 WDFY3Q8IZQ1 3526 aa9.71□□□□□ -0.85
LIMS2-213ENST00000469300 TNRC18O15417 2968 aaPredicted RBP9.71□□□□□ -0.86
LIMS2-213ENST00000469300 K7EQZ3 153 aa9.7□□□□□ -0.86
LIMS2-213ENST00000469300 NBEAL1Q6ZS30 2694 aa9.7□□□□□ -0.86
LIMS2-213ENST00000469300 SPRR4Q96PI1 79 aa9.68□□□□□ -0.86
LIMS2-213ENST00000469300 BAHCC1Q9P281 2608 aa9.67□□□□□ -0.86
LIMS2-213ENST00000469300 IGLV8-61A0A075B6I0 122 aa9.66□□□□□ -0.86
LIMS2-213ENST00000469300 SMR3BP02814 79 aaPredicted RBP9.65□□□□□ -0.86
LIMS2-213ENST00000469300 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.86
LIMS2-213ENST00000469300 ZANQ9Y493 2812 aa9.65□□□□□ -0.87
LIMS2-213ENST00000469300 FAM104AQ969W3 186 aa9.64□□□□□ -0.87
LIMS2-213ENST00000469300 TNP2Q05952 138 aa9.64□□□□□ -0.87
LIMS2-213ENST00000469300 MIR22HGQ0VDD5 57 aa9.63□□□□□ -0.87
LIMS2-213ENST00000469300 C8orf17Q9NRJ1 99 aa9.63□□□□□ -0.87
LIMS2-213ENST00000469300 A0A1B0GVX0 72 aa9.63□□□□□ -0.87
LIMS2-213ENST00000469300 Q1T7F1 81 aa9.63□□□□□ -0.87
LIMS2-213ENST00000469300 UTP20O75691 2785 aaKnown RBP9.62□□□□□ -0.87
LIMS2-213ENST00000469300 Q5XG85 94 aa9.62□□□□□ -0.87
LIMS2-213ENST00000469300 RBM12B-AS1Q9P1G2 102 aa9.61□□□□□ -0.87
LIMS2-213ENST00000469300 SPANXA2-OT1Q8N9U9 137 aa9.6□□□□□ -0.87
LIMS2-213ENST00000469300 IGLV5-48A0A075B6I7 105 aa9.57□□□□□ -0.88
LIMS2-213ENST00000469300 ITPR2Q14571 2701 aa9.55□□□□□ -0.88
LIMS2-213ENST00000469300 A0A0G2JQZ4 141 aa9.55□□□□□ -0.88
LIMS2-213ENST00000469300 OBSCN-AS1Q96MR7 158 aa9.55□□□□□ -0.88
LIMS2-213ENST00000469300 NSD1Q96L73 2696 aaPredicted RBP9.55□□□□□ -0.88
LIMS2-213ENST00000469300 DSCR10P59022 87 aa9.54□□□□□ -0.88
LIMS2-213ENST00000469300 A0A1W2PNM2 257 aa9.53□□□□□ -0.88
LIMS2-213ENST00000469300 ASPMQ8IZT6 3477 aa9.53□□□□□ -0.88
LIMS2-213ENST00000469300 DCHS1Q96JQ0 3298 aa9.53□□□□□ -0.88
LIMS2-213ENST00000469300 ANAPC11Q9NYG5 84 aa9.53□□□□□ -0.88
LIMS2-213ENST00000469300 H3BS24 57 aa9.52□□□□□ -0.89
LIMS2-213ENST00000469300 CELSR2Q9HCU4 2923 aa9.51□□□□□ -0.89
LIMS2-213ENST00000469300 OCR1Q9BZK8 76 aa9.5□□□□□ -0.89
LIMS2-213ENST00000469300 MUC3AQ02505 3323 aa9.5□□□□□ -0.89
LIMS2-213ENST00000469300 FAM229BQ4G0N7 80 aa9.49□□□□□ -0.89
LIMS2-213ENST00000469300 FP248Q71RG6 208 aaPredicted RBP9.49□□□□□ -0.89
LIMS2-213ENST00000469300 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
LIMS2-213ENST00000469300 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.49□□□□□ -0.89
LIMS2-213ENST00000469300 CRIPTQ9P021 101 aa9.47□□□□□ -0.89
LIMS2-213ENST00000469300 LINC01554Q52M75 96 aa9.47□□□□□ -0.89
LIMS2-213ENST00000469300 COX6B2Q6YFQ2 88 aa9.45□□□□□ -0.9
LIMS2-213ENST00000469300 NF1P21359 2839 aa9.45□□□□□ -0.9
LIMS2-213ENST00000469300 RELNP78509 3460 aa9.44□□□□□ -0.9
LIMS2-213ENST00000469300 CRYBG3Q68DQ2 2970 aa9.44□□□□□ -0.9
LIMS2-213ENST00000469300 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
LIMS2-213ENST00000469300 SPRR1AP35321 89 aa9.42□□□□□ -0.9
LIMS2-213ENST00000469300 Q75L30 129 aa9.42□□□□□ -0.9
LIMS2-213ENST00000469300 CYSTM1Q9H1C7 97 aa9.42□□□□□ -0.9
LIMS2-213ENST00000469300 FBN2P35556 2912 aa9.41□□□□□ -0.9
LIMS2-213ENST00000469300 HIVEP1P15822 2718 aa9.4□□□□□ -0.9
LIMS2-213ENST00000469300 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.9
LIMS2-213ENST00000469300 LAMA5O15230 3695 aa9.4□□□□□ -0.91
LIMS2-213ENST00000469300 LCE6AA0A183 80 aa9.38□□□□□ -0.91
LIMS2-213ENST00000469300 Q8NDZ9 215 aa9.37□□□□□ -0.91
LIMS2-213ENST00000469300 ZFHX4Q86UP3 3567 aa9.37□□□□□ -0.91
LIMS2-213ENST00000469300 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
LIMS2-213ENST00000469300 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
LIMS2-213ENST00000469300 DCHS2Q6V1P9 2916 aa9.34□□□□□ -0.91
LIMS2-213ENST00000469300 Q8N9P0 234 aaPredicted RBP9.34□□□□□ -0.91
LIMS2-213ENST00000469300 SPRR1BP22528 89 aa9.34□□□□□ -0.91
LIMS2-213ENST00000469300 PRR26Q8N8Z3 221 aa9.33□□□□□ -0.92
LIMS2-213ENST00000469300 APCP25054 2843 aa9.32□□□□□ -0.92
LIMS2-213ENST00000469300 DMDP11532 3685 aa9.32□□□□□ -0.92
LIMS2-213ENST00000469300 OXTP01178 125 aa9.31□□□□□ -0.92
LIMS2-213ENST00000469300 STAB2Q8WWQ8 2551 aa9.29□□□□□ -0.92
LIMS2-213ENST00000469300 IGLV7-46A0A075B6I9 117 aa9.29□□□□□ -0.92
LIMS2-213ENST00000469300 LINC01558Q9Y6Z2 57 aa9.28□□□□□ -0.92
LIMS2-213ENST00000469300 Q5VV11 94 aa9.26□□□□□ -0.93
LIMS2-213ENST00000469300 PRAC1Q96KF2 57 aa9.25□□□□□ -0.93
LIMS2-213ENST00000469300 KRTAP21-3Q3LHN1 58 aa9.25□□□□□ -0.93
LIMS2-213ENST00000469300 NIPBLQ6KC79 2804 aaeCLIP9.23□□□□□ -0.93
LIMS2-213ENST00000469300 Q6ZR54 194 aa9.23□□□□□ -0.93
LIMS2-213ENST00000469300 Q6ZSA8 131 aa9.21□□□□□ -0.93
LIMS2-213ENST00000469300 KMT2BQ9UMN6 2715 aaPredicted RBP9.18□□□□□ -0.94
LIMS2-213ENST00000469300 LUZP6Q538Z0 58 aa9.18□□□□□ -0.94
LIMS2-213ENST00000469300 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
LIMS2-213ENST00000469300 MXRA5Q9NR99 2828 aa9.15□□□□□ -0.94
LIMS2-213ENST00000469300 KRTAP10-2P60368 255 aa9.14□□□□□ -0.95
LIMS2-213ENST00000469300 Q5VSD8 79 aa9.12□□□□□ -0.95
LIMS2-213ENST00000469300 CSAG1Q6PB30 78 aa9.12□□□□□ -0.95
LIMS2-213ENST00000469300 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
LIMS2-213ENST00000469300 Q8N1X5 172 aa9.11□□□□□ -0.95
LIMS2-213ENST00000469300 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms