RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 SAMD9LQ8IVG5 1584 aa1.35□□□□□ -2.19
XRN1-207ENST00000468894 IGSF10Q6WRI0 2623 aa1.35□□□□□ -2.19
XRN1-207ENST00000468894 SNRPGP62308 76 aaKnown RBP1.35□□□□□ -2.19
XRN1-207ENST00000468894 SERF2P84101 59 aa1.35□□□□□ -2.19
XRN1-207ENST00000468894 SPINK13Q1W4C9 94 aa1.35□□□□□ -2.19
XRN1-207ENST00000468894 PLAC4Q8WY50 150 aa1.35□□□□□ -2.19
XRN1-207ENST00000468894 ASPMQ8IZT6 3477 aa1.35□□□□□ -2.19
XRN1-207ENST00000468894 C5orf42Q9H799 3197 aa1.35□□□□□ -2.19
XRN1-207ENST00000468894 USP34Q70CQ2 3546 aa1.34□□□□□ -2.19
XRN1-207ENST00000468894 LY6G6CO95867 125 aa1.34□□□□□ -2.19
XRN1-207ENST00000468894 DEFB114Q30KQ6 69 aa1.34□□□□□ -2.19
XRN1-207ENST00000468894 KCNQ1DNQ9H478 68 aa1.34□□□□□ -2.19
XRN1-207ENST00000468894 TNRC6CQ9HCJ0 1690 aaKnown RBP1.34□□□□□ -2.19
XRN1-207ENST00000468894 CFAP54Q96N23 3096 aa1.34□□□□□ -2.2
XRN1-207ENST00000468894 SPG11Q96JI7 2443 aa1.34□□□□□ -2.2
XRN1-207ENST00000468894 LRRK2Q5S007 2527 aa1.33□□□□□ -2.2
XRN1-207ENST00000468894 CACNA1EQ15878 2313 aa1.33□□□□□ -2.2
XRN1-207ENST00000468894 ETDCA0A1B0GVM5 59 aa1.33□□□□□ -2.2
XRN1-207ENST00000468894 PTPRQQ9UMZ3 2332 aa1.33□□□□□ -2.2
XRN1-207ENST00000468894 EP400Q96L91 3159 aa1.33□□□□□ -2.2
XRN1-207ENST00000468894 NCOR1O75376 2440 aa1.32□□□□□ -2.2
XRN1-207ENST00000468894 CSMD1Q96PZ7 3565 aa1.32□□□□□ -2.2
XRN1-207ENST00000468894 CPSF4LA6NMK7 179 aaKnown RBP1.32□□□□□ -2.2
XRN1-207ENST00000468894 NDUFA3O95167 84 aa1.32□□□□□ -2.2
XRN1-207ENST00000468894 CRIP1P50238 77 aa1.32□□□□□ -2.2
XRN1-207ENST00000468894 RPL38P63173 70 aaKnown RBP1.32□□□□□ -2.2
XRN1-207ENST00000468894 CRIPTQ9P021 101 aa1.32□□□□□ -2.2
XRN1-207ENST00000468894 RYR1P21817 5038 aa1.31□□□□□ -2.2
XRN1-207ENST00000468894 NCOR2Q9Y618 2525 aa1.31□□□□□ -2.2
XRN1-207ENST00000468894 ANGP03950 147 aaKnown RBP1.31□□□□□ -2.2
XRN1-207ENST00000468894 POLQO75417 2590 aa1.31□□□□□ -2.2
XRN1-207ENST00000468894 RYR3Q15413 4870 aa1.31□□□□□ -2.2
XRN1-207ENST00000468894 TEX15Q9BXT5 2789 aa1.3□□□□□ -2.2
XRN1-207ENST00000468894 DCHS1Q96JQ0 3298 aa1.3□□□□□ -2.2
XRN1-207ENST00000468894 LAMA3Q16787 3333 aa1.3□□□□□ -2.2
XRN1-207ENST00000468894 UBR5O95071 2799 aaPredicted RBP1.3□□□□□ -2.2
XRN1-207ENST00000468894 PIEZO2Q9H5I5 2752 aa1.3□□□□□ -2.2
XRN1-207ENST00000468894 LOC730098B7Z3J9 87 aa1.3□□□□□ -2.2
XRN1-207ENST00000468894 FXYD6P3P58550 94 aa1.3□□□□□ -2.2
XRN1-207ENST00000468894 FAM208BQ5VWN6 2430 aa1.3□□□□□ -2.2
XRN1-207ENST00000468894 HTTP42858 3142 aa1.3□□□□□ -2.2
XRN1-207ENST00000468894 FLNAP21333 2647 aaKnown RBP1.29□□□□□ -2.2
XRN1-207ENST00000468894 FLNCQ14315 2725 aa1.29□□□□□ -2.2
XRN1-207ENST00000468894 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
XRN1-207ENST00000468894 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
XRN1-207ENST00000468894 PKD1L1Q8TDX9 2849 aa1.29□□□□□ -2.2
XRN1-207ENST00000468894 HYDINQ4G0P3 5121 aa1.28□□□□□ -2.2
XRN1-207ENST00000468894 LYNX1P0DP58 116 aa1.28□□□□□ -2.2
XRN1-207ENST00000468894 PRO3102Q9H379 93 aa1.28□□□□□ -2.2
XRN1-207ENST00000468894 PDZD2O15018 2839 aa1.28□□□□□ -2.2
XRN1-207ENST00000468894 NBEAL1Q6ZS30 2694 aa1.27□□□□□ -2.21
XRN1-207ENST00000468894 MRPL33O75394 65 aaKnown RBP1.27□□□□□ -2.21
XRN1-207ENST00000468894 USF3Q68DE3 2245 aa1.27□□□□□ -2.21
XRN1-207ENST00000468894 TPRP12270 2363 aaKnown RBP1.26□□□□□ -2.21
XRN1-207ENST00000468894 PTPRZ1P23471 2315 aaPredicted RBP1.26□□□□□ -2.21
XRN1-207ENST00000468894 DEFB131BA0A096LNP1 70 aa1.26□□□□□ -2.21
XRN1-207ENST00000468894 SPTY2D1-AS1A0A0U1RR47 76 aa1.26□□□□□ -2.21
XRN1-207ENST00000468894 H0YGX0 51 aa1.26□□□□□ -2.21
XRN1-207ENST00000468894 TFF3Q07654 80 aa1.26□□□□□ -2.21
XRN1-207ENST00000468894 CDKN2A-AS1Q9UH64 79 aa1.26□□□□□ -2.21
XRN1-207ENST00000468894 BIRC6Q9NR09 4857 aa1.26□□□□□ -2.21
XRN1-207ENST00000468894 ZANQ9Y493 2812 aa1.25□□□□□ -2.21
XRN1-207ENST00000468894 ATRQ13535 2644 aa1.25□□□□□ -2.21
XRN1-207ENST00000468894 ZFYVE26Q68DK2 2539 aa1.25□□□□□ -2.21
XRN1-207ENST00000468894 TLN1Q9Y490 2541 aaKnown RBP1.25□□□□□ -2.21
XRN1-207ENST00000468894 MAP1BP46821 2468 aaKnown RBP1.25□□□□□ -2.21
XRN1-207ENST00000468894 CNTRLQ7Z7A1 2325 aa1.25□□□□□ -2.21
XRN1-207ENST00000468894 LINC00158P58513 81 aa1.25□□□□□ -2.21
XRN1-207ENST00000468894 PRB3Q04118 309 aaPredicted RBP1.25□□□□□ -2.21
XRN1-207ENST00000468894 UBE2DNLQ8IWF7 75 aa1.25□□□□□ -2.21
XRN1-207ENST00000468894 SPTAN1Q13813 2472 aaKnown RBP1.24□□□□□ -2.21
XRN1-207ENST00000468894 KNL1Q8NG31 2342 aa1.24□□□□□ -2.21
XRN1-207ENST00000468894 IGF2RP11717 2491 aa1.24□□□□□ -2.21
XRN1-207ENST00000468894 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
XRN1-207ENST00000468894 ACACBO00763 2458 aa1.23□□□□□ -2.21
XRN1-207ENST00000468894 I3L2K1 104 aa1.23□□□□□ -2.21
XRN1-207ENST00000468894 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
XRN1-207ENST00000468894 KMT2CQ8NEZ4 4911 aaKnown RBP1.22□□□□□ -2.21
XRN1-207ENST00000468894 XIRP2A4UGR9 3374 aa1.22□□□□□ -2.21
XRN1-207ENST00000468894 PRUNE2Q8WUY3 3088 aa1.22□□□□□ -2.21
XRN1-207ENST00000468894 CDH23Q9H251 3354 aa1.22□□□□□ -2.21
XRN1-207ENST00000468894 K7EIL1 84 aa1.22□□□□□ -2.21
XRN1-207ENST00000468894 COX6B2Q6YFQ2 88 aa1.22□□□□□ -2.21
XRN1-207ENST00000468894 Q8IZM0 81 aa1.22□□□□□ -2.21
XRN1-207ENST00000468894 LINC00308Q8TCZ7 52 aa1.22□□□□□ -2.21
XRN1-207ENST00000468894 PKDREJQ9NTG1 2253 aa1.22□□□□□ -2.21
XRN1-207ENST00000468894 BSNQ9UPA5 3926 aa1.21□□□□□ -2.21
XRN1-207ENST00000468894 CREBBPQ92793 2442 aa1.21□□□□□ -2.22
XRN1-207ENST00000468894 NF1P21359 2839 aa1.21□□□□□ -2.22
XRN1-207ENST00000468894 LELP1Q5T871 98 aa1.21□□□□□ -2.22
XRN1-207ENST00000468894 USMG5Q96IX5 58 aa1.21□□□□□ -2.22
XRN1-207ENST00000468894 TMEM167BQ9NRX6 74 aa1.21□□□□□ -2.22
XRN1-207ENST00000468894 CEP250Q9BV73 2442 aa1.21□□□□□ -2.22
XRN1-207ENST00000468894 MEGF8Q7Z7M0 2845 aa1.21□□□□□ -2.22
XRN1-207ENST00000468894 H0YAA0 97 aa1.2□□□□□ -2.22
XRN1-207ENST00000468894 K7EQZ3 153 aa1.2□□□□□ -2.22
XRN1-207ENST00000468894 DEFB123Q8N688 67 aa1.2□□□□□ -2.22
XRN1-207ENST00000468894 MRPL34Q9BQ48 92 aaKnown RBP1.2□□□□□ -2.22
XRN1-207ENST00000468894 CEP295Q9C0D2 2601 aa1.2□□□□□ -2.22
XRN1-207ENST00000468894 UTP20O75691 2785 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms