RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CLEC2BQ92478 149 aa2.51□□□□□ -2.01
TMEM39A-204ENST00000468545 KCNQ1DNQ9H478 68 aa2.51□□□□□ -2.01
TMEM39A-204ENST00000468545 PSORS1C2Q9UIG4 136 aa2.51□□□□□ -2.01
TMEM39A-204ENST00000468545 CBY1Q9Y3M2 126 aa2.51□□□□□ -2.01
TMEM39A-204ENST00000468545 A0A1B0GV90 55 aa2.5□□□□□ -2.01
TMEM39A-204ENST00000468545 A0A1W2PPM0 123 aa2.5□□□□□ -2.01
TMEM39A-204ENST00000468545 H0YGX0 51 aa2.5□□□□□ -2.01
TMEM39A-204ENST00000468545 BCE1O60756 84 aa2.5□□□□□ -2.01
TMEM39A-204ENST00000468545 PRLHP81277 87 aa2.5□□□□□ -2.01
TMEM39A-204ENST00000468545 DEFB105AQ8NG35 78 aa2.5□□□□□ -2.01
TMEM39A-204ENST00000468545 SMCR5Q8TEV8 140 aa2.5□□□□□ -2.01
TMEM39A-204ENST00000468545 HIGD2AQ9BW72 106 aa2.5□□□□□ -2.01
TMEM39A-204ENST00000468545 hADV29S1A0JD25 119 aa2.49□□□□□ -2.01
TMEM39A-204ENST00000468545 SLC25A20O43772 301 aa2.49□□□□□ -2.01
TMEM39A-204ENST00000468545 SNCGO76070 127 aa2.49□□□□□ -2.01
TMEM39A-204ENST00000468545 TCL1BO95988 128 aa2.49□□□□□ -2.01
TMEM39A-204ENST00000468545 RPL37AP61513 92 aaKnown RBP2.49□□□□□ -2.01
TMEM39A-204ENST00000468545 ATXN8Q156A1 80 aa2.49□□□□□ -2.01
TMEM39A-204ENST00000468545 LYRM7Q5U5X0 104 aa2.49□□□□□ -2.01
TMEM39A-204ENST00000468545 SPCS1Q9Y6A9 102 aa2.49□□□□□ -2.01
TMEM39A-204ENST00000468545 RYR1P21817 5038 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 FAT1Q14517 4588 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 ERC2-IT1O76042 136 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 IGLV7-43P04211 117 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 INAFM2P0DMQ5 153 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 SPRR1AP35321 89 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 ELOF1P60002 83 aaKnown RBP2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 ST20-AS1Q8NBB2 130 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 Q9BRP9 147 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 OCR1Q9BZK8 76 aa2.48□□□□□ -2.01
TMEM39A-204ENST00000468545 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 TRBV20-1A0A075B6N2 111 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 TRBV7-6A0A0J9YX20 115 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 C9JAW5 83 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 KRTAP4-16G5E9R7 235 aaPredicted RBP2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 H3BMG7 143 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 K7EP34 96 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 LST1O00453 97 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 ZNF861PO60384 105 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 DNAL4O96015 105 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 Q6ZRX8 168 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 GTF2H5Q6ZYL4 71 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 MTURNQ8N3F0 131 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 DHRS4-AS1Q9P1J3 65 aa2.47□□□□□ -2.01
TMEM39A-204ENST00000468545 A0A1B0GV72 72 aa2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 BAALC-AS2P0C853 105 aa2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 NDUFV3P56181 108 aaKnown RBP2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 KRTAP10-12P60413 245 aa2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 Q6ZQY7 126 aa2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 ANAPC11Q9NYG5 84 aa2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 HSPG2P98160 4391 aa2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 KIAA1109Q2LD37 5005 aa2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
TMEM39A-204ENST00000468545 A0A1B0GX51 115 aa2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 H0Y9J4 135 aa2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 TRACP01848 142 aa2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 DSCR10P59022 87 aa2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 Q5VSD8 79 aa2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 KRTAP13-1Q8IUC0 172 aa2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 ORMDL1Q9P0S3 153 aa2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 LAMTOR3Q9UHA4 124 aa2.45□□□□□ -2.02
TMEM39A-204ENST00000468545 TEX49A0A1B0GTD5 131 aa2.44□□□□□ -2.02
TMEM39A-204ENST00000468545 SPINK6Q6UWN8 80 aa2.44□□□□□ -2.02
TMEM39A-204ENST00000468545 C3orf22Q8N5N4 141 aa2.44□□□□□ -2.02
TMEM39A-204ENST00000468545 SPRR4Q96PI1 79 aa2.44□□□□□ -2.02
TMEM39A-204ENST00000468545 ZNF706Q9Y5V0 76 aaPredicted RBP2.44□□□□□ -2.02
TMEM39A-204ENST00000468545 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
TMEM39A-204ENST00000468545 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
TMEM39A-204ENST00000468545 TMEM256-PLSCR3K7ERE1 68 aa2.43□□□□□ -2.02
TMEM39A-204ENST00000468545 OCIAD2Q56VL3 154 aa2.43□□□□□ -2.02
TMEM39A-204ENST00000468545 C9orf153Q5TBE3 101 aa2.43□□□□□ -2.02
TMEM39A-204ENST00000468545 ANKRD29Q8N6D5 301 aa2.43□□□□□ -2.02
TMEM39A-204ENST00000468545 A0A0G2JQZ4 141 aa2.42□□□□□ -2.02
TMEM39A-204ENST00000468545 F8W1H4 67 aa2.42□□□□□ -2.02
TMEM39A-204ENST00000468545 F8WEM9 126 aa2.42□□□□□ -2.02
TMEM39A-204ENST00000468545 H3BQ85 93 aa2.42□□□□□ -2.02
TMEM39A-204ENST00000468545 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
TMEM39A-204ENST00000468545 KRTAP10-4P60372 401 aaPredicted RBP2.42□□□□□ -2.02
TMEM39A-204ENST00000468545 PRO0461Q9UI25 63 aa2.42□□□□□ -2.02
TMEM39A-204ENST00000468545 IGLV5-48A0A075B6I7 105 aa2.41□□□□□ -2.02
TMEM39A-204ENST00000468545 H3BT86 120 aa2.41□□□□□ -2.02
TMEM39A-204ENST00000468545 SPRR1BP22528 89 aa2.41□□□□□ -2.02
TMEM39A-204ENST00000468545 RBM3P98179 157 aaKnown RBP2.41□□□□□ -2.02
TMEM39A-204ENST00000468545 ETDBQ3ZM63 59 aa2.41□□□□□ -2.02
TMEM39A-204ENST00000468545 HRCT1Q6UXD1 115 aa2.41□□□□□ -2.02
TMEM39A-204ENST00000468545 VPS25Q9BRG1 176 aa2.41□□□□□ -2.02
TMEM39A-204ENST00000468545 CRYGAP11844 174 aa2.4□□□□□ -2.03
TMEM39A-204ENST00000468545 MOBPQ13875 183 aa2.4□□□□□ -2.03
TMEM39A-204ENST00000468545 LINC00483Q53H64 154 aa2.4□□□□□ -2.03
TMEM39A-204ENST00000468545 TYMSOSQ8TAI1 123 aa2.4□□□□□ -2.03
TMEM39A-204ENST00000468545 PPDPFLQ8WWR9 84 aa2.4□□□□□ -2.03
TMEM39A-204ENST00000468545 DSCR8Q96T75 97 aa2.4□□□□□ -2.03
TMEM39A-204ENST00000468545 C14orf132Q9NPU4 83 aa2.4□□□□□ -2.03
TMEM39A-204ENST00000468545 HERC2O95714 4834 aa2.39□□□□□ -2.03
TMEM39A-204ENST00000468545 JMJD7-PLA2G4BH0Y9G9 81 aa2.39□□□□□ -2.03
TMEM39A-204ENST00000468545 KRTAP1-4P0C5Y4 121 aa2.39□□□□□ -2.03
TMEM39A-204ENST00000468545 KRTAP13-2Q52LG2 175 aa2.39□□□□□ -2.03
TMEM39A-204ENST00000468545 FAT3Q8TDW7 4589 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms