RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 UBE2L5PA0A1B0GUS4 154 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 HCG22E2RYF7 251 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 GNGT2O14610 69 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 SSSCA1O60232 199 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 SFT2D2O95562 160 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 CFDP00746 253 aaPredicted RBP0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 ASIPP42127 132 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 UBE2D1P51668 147 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 UBE2L3P68036 154 aaKnown RBP0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 C9orf116Q5BN46 136 aaPredicted RBP0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 PSMG4Q5JS54 123 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 SPANXN1Q5VSR9 72 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 MYOZ3Q8TDC0 251 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 IFI27L1Q96BM0 104 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 S100A16Q96FQ6 103 aaKnown RBP0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 LINC01600Q96MT4 127 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 S100A13Q99584 98 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 PMCHL2Q9BQD1 86 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 SMCO4Q9NRQ5 59 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 STAB2Q8WWQ8 2551 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 ALMS1Q8TCU4 4167 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 PKHD1P08F94 4074 aa0.57□□□□□ -2.32
GAPVD1-211ENST00000467707 A0A087WTM6 91 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 PIGBOS1A0A0B4J2F0 54 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 FAM24AA6NFZ4 105 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 H7BZZ5 65 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 SNCGO76070 127 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 KRTAP2-3P0C7H8 128 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 LINC00032P0C843 101 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 S100A3P33764 101 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 SERF2P84101 59 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 DEFB136Q30KP8 78 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 Q5VSD8 79 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 HEPN1Q6WQI6 88 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 VMO1Q7Z5L0 202 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 UBE2DNLQ8IWF7 75 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 FAM223AQ8IWN6 122 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 SPTSSBQ8NFR3 76 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 SMIM4Q8WVI0 70 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 COPS9Q8WXC6 57 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 KRTAP2-4Q9BYR9 128 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 KRTAP2-1Q9BYU5 128 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 NMES1Q9C002 83 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 HIGD1BQ9P298 99 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 CACFD1Q9UGQ2 172 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 DNAH3Q8TD57 4116 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 PLCE1Q9P212 2302 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 DNAJC13O75165 2243 aa0.56□□□□□ -2.32
GAPVD1-211ENST00000467707 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 DOCK11Q5JSL3 2073 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 DMBT1Q9UGM3 2413 aaPredicted RBP0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 FAT4Q6V0I7 4981 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 TRBV7-1A0A0A6YYK4 115 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 TRAV13-2A0A0B4J235 113 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 TRAV12-3A0A0B4J271 114 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 TRAV22A0A0B4J277 110 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 TRBV10-3A0A0K0K1G6 114 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 C7orf77A4D0Y5 90 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 UMAD1C9J7I0 102 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 GYPAP02724 150 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 SMR3BP02814 79 aaPredicted RBP0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 ATP5EP56381 51 aaPredicted RBP0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 UBE2D3P61077 147 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 UBE2D2P62837 147 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 WFDC2Q14508 124 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 TOMM5Q8N4H5 51 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 CMC2Q9NRP2 79 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 RABAC1Q9UI14 185 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 HILPDAQ9Y5L2 63 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 WNK2Q9Y3S1 2297 aa0.55□□□□□ -2.32
GAPVD1-211ENST00000467707 DNAH2Q9P225 4427 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 DNAH11Q96DT5 4516 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 FAT1Q14517 4588 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 FSIP2Q5CZC0 6907 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 MYCBP2O75592 4640 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 KANTRA0A1W2PQU2 76 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 TMEM14DPA8MWL7 114 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 SYS1-DBNDD2H3BUS1 97 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 HMGN4O00479 90 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 DEFB4AO15263 64 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 SIX6O95475 246 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 CYB5AP00167 134 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 APOC3P02656 99 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 IGLC2P0DOY2 106 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 IGLC3P0DOY3 106 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 FAUP35544 74 aaKnown RBP0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 SEC11AP67812 179 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 HAMPP81172 84 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 PLECQ15149 4684 aaKnown RBP0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 ETDBQ3ZM63 59 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 NMSQ5H8A3 153 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 BVES-AS1Q5T3Y7 98 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 LINC01590Q5TEZ4 76 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 SERP2Q8N6R1 65 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 DEFB104AQ8WTQ1 72 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 CDC42SE2Q9NRR3 84 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 NDUFA4L2Q9NRX3 87 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 HECTD4Q9Y4D8 3996 aa0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 APOBP04114 4563 aaKnown RBP0.54□□□□□ -2.32
GAPVD1-211ENST00000467707 STARD9Q9P2P6 4700 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms