RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 CACNA1EQ15878 2313 aa1.24□□□□□ -2.21
VPS50-209ENST00000467326 K7EIM0 57 aa1.22□□□□□ -2.21
VPS50-209ENST00000467326 LELP1Q5T871 98 aa1.22□□□□□ -2.21
VPS50-209ENST00000467326 TMEM167AQ8TBQ9 72 aa1.22□□□□□ -2.21
VPS50-209ENST00000467326 BPTFQ12830 3046 aa1.21□□□□□ -2.22
VPS50-209ENST00000467326 RP1L1Q8IWN7 2480 aaPredicted RBP1.21□□□□□ -2.22
VPS50-209ENST00000467326 PIEZO2Q9H5I5 2752 aa1.19□□□□□ -2.22
VPS50-209ENST00000467326 A8MTW9 85 aa1.19□□□□□ -2.22
VPS50-209ENST00000467326 DEFB106AQ8N104 65 aa1.19□□□□□ -2.22
VPS50-209ENST00000467326 S4R3F8 94 aa1.19□□□□□ -2.22
VPS50-209ENST00000467326 CLPSL2Q6UWE3 100 aa1.18□□□□□ -2.22
VPS50-209ENST00000467326 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.17□□□□□ -2.22
VPS50-209ENST00000467326 KRTAP10-4P60372 401 aaPredicted RBP1.17□□□□□ -2.22
VPS50-209ENST00000467326 KLK9Q2XQG4 91 aa1.16□□□□□ -2.22
VPS50-209ENST00000467326 ROS1P08922 2347 aa1.16□□□□□ -2.22
VPS50-209ENST00000467326 WNK2Q9Y3S1 2297 aa1.15□□□□□ -2.22
VPS50-209ENST00000467326 CNOT1A5YKK6 2376 aaKnown RBP1.15□□□□□ -2.23
VPS50-209ENST00000467326 H0YGG7 62 aa1.14□□□□□ -2.23
VPS50-209ENST00000467326 SPINK1P00995 79 aa1.14□□□□□ -2.23
VPS50-209ENST00000467326 ASH1LQ9NR48 2969 aaKnown RBP1.14□□□□□ -2.23
VPS50-209ENST00000467326 COL6A6A6NMZ7 2263 aa1.13□□□□□ -2.23
VPS50-209ENST00000467326 RPL39P5Q59GN2 51 aa1.13□□□□□ -2.23
VPS50-209ENST00000467326 TENM1Q9UKZ4 2725 aa1.13□□□□□ -2.23
VPS50-209ENST00000467326 M0QZ58 72 aa1.12□□□□□ -2.23
VPS50-209ENST00000467326 DEFB108AA8MXU0 73 aa1.11□□□□□ -2.23
VPS50-209ENST00000467326 H3BUX3 64 aa1.1□□□□□ -2.23
VPS50-209ENST00000467326 DEFB104AQ8WTQ1 72 aa1.1□□□□□ -2.23
VPS50-209ENST00000467326 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
VPS50-209ENST00000467326 PTPRQQ9UMZ3 2332 aa1.09□□□□□ -2.23
VPS50-209ENST00000467326 PTPRZ1P23471 2315 aaPredicted RBP1.09□□□□□ -2.24
VPS50-209ENST00000467326 PDE4DIPQ5VU43 2346 aa1.06□□□□□ -2.24
VPS50-209ENST00000467326 PLCE1Q9P212 2302 aa1.06□□□□□ -2.24
VPS50-209ENST00000467326 SPTBN2O15020 2390 aa1.06□□□□□ -2.24
VPS50-209ENST00000467326 TPRP12270 2363 aaKnown RBP1.06□□□□□ -2.24
VPS50-209ENST00000467326 C2CD3Q4AC94 2353 aa1.06□□□□□ -2.24
VPS50-209ENST00000467326 HELZ2Q9BYK8 2649 aaKnown RBP1.05□□□□□ -2.24
VPS50-209ENST00000467326 ZNF462Q96JM2 2506 aa1.05□□□□□ -2.24
VPS50-209ENST00000467326 USF3Q68DE3 2245 aa1.05□□□□□ -2.24
VPS50-209ENST00000467326 CACNA1HO95180 2353 aa1.04□□□□□ -2.24
VPS50-209ENST00000467326 TTC28Q96AY4 2481 aa1.04□□□□□ -2.24
VPS50-209ENST00000467326 DEFB135Q30KP9 77 aa1.04□□□□□ -2.24
VPS50-209ENST00000467326 KNL1Q8NG31 2342 aa1.03□□□□□ -2.24
VPS50-209ENST00000467326 MEGF8Q7Z7M0 2845 aa1.03□□□□□ -2.24
VPS50-209ENST00000467326 POLQO75417 2590 aa1.02□□□□□ -2.25
VPS50-209ENST00000467326 SPINK6Q6UWN8 80 aa1.02□□□□□ -2.25
VPS50-209ENST00000467326 ALMS1Q8TCU4 4167 aa1.02□□□□□ -2.25
VPS50-209ENST00000467326 RHPN1-AS1Q9BWJ2 59 aa1.02□□□□□ -2.25
VPS50-209ENST00000467326 C9orf92A6NGG3 77 aa1.01□□□□□ -2.25
VPS50-209ENST00000467326 TNP1P09430 55 aa1.01□□□□□ -2.25
VPS50-209ENST00000467326 SPART-AS1P0CW21 52 aa1.01□□□□□ -2.25
VPS50-209ENST00000467326 PKDREJQ9NTG1 2253 aa1.01□□□□□ -2.25
VPS50-209ENST00000467326 PCNX1Q96RV3 2341 aa1□□□□□ -2.25
VPS50-209ENST00000467326 ZNF292O60281 2723 aa1□□□□□ -2.25
VPS50-209ENST00000467326 M0R2T5 61 aa1□□□□□ -2.25
VPS50-209ENST00000467326 SPTBN1Q01082 2364 aaKnown RBP0.99□□□□□ -2.25
VPS50-209ENST00000467326 HTN1P15515 57 aa0.98□□□□□ -2.25
VPS50-209ENST00000467326 APELAP0DMC3 54 aa0.97□□□□□ -2.25
VPS50-209ENST00000467326 Q9Y3F1 56 aa0.97□□□□□ -2.25
VPS50-209ENST00000467326 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
VPS50-209ENST00000467326 ABCA12Q86UK0 2595 aa0.96□□□□□ -2.26
VPS50-209ENST00000467326 CHD9Q3L8U1 2897 aa0.95□□□□□ -2.26
VPS50-209ENST00000467326 PIEZO1Q92508 2521 aa0.94□□□□□ -2.26
VPS50-209ENST00000467326 GVINP1Q7Z2Y8 2422 aa0.94□□□□□ -2.26
VPS50-209ENST00000467326 IGF2RP11717 2491 aa0.93□□□□□ -2.26
VPS50-209ENST00000467326 DSPP15924 2871 aaKnown RBP0.93□□□□□ -2.26
VPS50-209ENST00000467326 ABCA2Q9BZC7 2435 aa0.93□□□□□ -2.26
VPS50-209ENST00000467326 BDP1A6H8Y1 2624 aa0.93□□□□□ -2.26
VPS50-209ENST00000467326 F8P00451 2351 aa0.92□□□□□ -2.26
VPS50-209ENST00000467326 H3BNG1 76 aa0.92□□□□□ -2.26
VPS50-209ENST00000467326 COX14Q96I36 57 aa0.92□□□□□ -2.26
VPS50-209ENST00000467326 U3KQA8 63 aa0.92□□□□□ -2.26
VPS50-209ENST00000467326 TRANK1O15050 2925 aa0.92□□□□□ -2.26
VPS50-209ENST00000467326 A0A0C4DFX4 3053 aa0.91□□□□□ -2.26
VPS50-209ENST00000467326 CELSR2Q9HCU4 2923 aa0.91□□□□□ -2.26
VPS50-209ENST00000467326 A0A096LNI7 61 aa0.9□□□□□ -2.27
VPS50-209ENST00000467326 STATHP02808 62 aa0.9□□□□□ -2.27
VPS50-209ENST00000467326 DEFB124Q8NES8 71 aa0.9□□□□□ -2.27
VPS50-209ENST00000467326 SMR3AQ99954 134 aa0.9□□□□□ -2.27
VPS50-209ENST00000467326 REV3LO60673 3130 aa0.9□□□□□ -2.27
VPS50-209ENST00000467326 TENM4Q6N022 2769 aa0.89□□□□□ -2.27
VPS50-209ENST00000467326 CSPG4Q6UVK1 2322 aa0.89□□□□□ -2.27
VPS50-209ENST00000467326 AKAP6Q13023 2319 aa0.88□□□□□ -2.27
VPS50-209ENST00000467326 DEFB1P60022 68 aa0.88□□□□□ -2.27
VPS50-209ENST00000467326 DEFB110Q30KQ9 67 aa0.88□□□□□ -2.27
VPS50-209ENST00000467326 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
VPS50-209ENST00000467326 DEFB108BQ8NET1 73 aa0.87□□□□□ -2.27
VPS50-209ENST00000467326 DEFB136Q30KP8 78 aa0.86□□□□□ -2.27
VPS50-209ENST00000467326 WNK1Q9H4A3 2382 aa0.86□□□□□ -2.27
VPS50-209ENST00000467326 KRTAP2-3P0C7H8 128 aa0.85□□□□□ -2.27
VPS50-209ENST00000467326 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
VPS50-209ENST00000467326 KRTAP2-4Q9BYR9 128 aa0.85□□□□□ -2.27
VPS50-209ENST00000467326 KRTAP2-1Q9BYU5 128 aa0.85□□□□□ -2.27
VPS50-209ENST00000467326 ATRQ13535 2644 aa0.85□□□□□ -2.27
VPS50-209ENST00000467326 PKD1L2Q7Z442 2459 aa0.84□□□□□ -2.28
VPS50-209ENST00000467326 PRRC2CQ9Y520 2896 aaKnown RBP0.83□□□□□ -2.28
VPS50-209ENST00000467326 CD52P31358 61 aa0.83□□□□□ -2.28
VPS50-209ENST00000467326 DEFB133Q30KQ1 61 aa0.83□□□□□ -2.28
VPS50-209ENST00000467326 CHD6Q8TD26 2715 aa0.82□□□□□ -2.28
VPS50-209ENST00000467326 HECTD1Q9ULT8 2610 aa0.82□□□□□ -2.28
VPS50-209ENST00000467326 SPTA1P02549 2419 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms