RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 Q8N9P0 234 aaPredicted RBP9.74□□□□□ -0.85
CHD1L-205ENST00000467213 CNBPP62633 177 aaKnown RBP9.73□□□□□ -0.85
CHD1L-205ENST00000467213 A8MUN3 132 aa9.72□□□□□ -0.85
CHD1L-205ENST00000467213 UBE2AP49459 152 aa9.72□□□□□ -0.85
CHD1L-205ENST00000467213 J3QKU1 62 aa9.72□□□□□ -0.85
CHD1L-205ENST00000467213 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
CHD1L-205ENST00000467213 IGLV7-46A0A075B6I9 117 aa9.69□□□□□ -0.86
CHD1L-205ENST00000467213 PRR4Q16378 134 aa9.69□□□□□ -0.86
CHD1L-205ENST00000467213 KMT2BQ9UMN6 2715 aaPredicted RBP9.68□□□□□ -0.86
CHD1L-205ENST00000467213 OXLD1Q5BKU9 147 aa9.68□□□□□ -0.86
CHD1L-205ENST00000467213 Q75L30 129 aa9.68□□□□□ -0.86
CHD1L-205ENST00000467213 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
CHD1L-205ENST00000467213 DEFB116Q30KQ4 102 aa9.67□□□□□ -0.86
CHD1L-205ENST00000467213 UNC79Q9P2D8 2635 aa9.66□□□□□ -0.86
CHD1L-205ENST00000467213 PRLHP81277 87 aa9.66□□□□□ -0.86
CHD1L-205ENST00000467213 TP53AIP1Q9HCN2 124 aa9.66□□□□□ -0.86
CHD1L-205ENST00000467213 A0A096LNI7 61 aa9.65□□□□□ -0.86
CHD1L-205ENST00000467213 RPL37AP61513 92 aaKnown RBP9.65□□□□□ -0.86
CHD1L-205ENST00000467213 A0A0G2JQZ4 141 aa9.65□□□□□ -0.86
CHD1L-205ENST00000467213 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
CHD1L-205ENST00000467213 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
CHD1L-205ENST00000467213 MMP24-AS1A0A0U1RRL7 71 aa9.63□□□□□ -0.87
CHD1L-205ENST00000467213 FLNBO75369 2602 aaKnown RBP9.63□□□□□ -0.87
CHD1L-205ENST00000467213 ATP11AUNQ6ZP68 121 aa9.61□□□□□ -0.87
CHD1L-205ENST00000467213 CD164Q04900 197 aa9.61□□□□□ -0.87
CHD1L-205ENST00000467213 C14orf177Q52M58 125 aa9.6□□□□□ -0.87
CHD1L-205ENST00000467213 CHKB-CPT1BH3BT56 60 aa9.6□□□□□ -0.87
CHD1L-205ENST00000467213 MOBPQ13875 183 aa9.6□□□□□ -0.87
CHD1L-205ENST00000467213 TEP1Q99973 2627 aaKnown RBP9.6□□□□□ -0.87
CHD1L-205ENST00000467213 DNAH3Q8TD57 4116 aa9.59□□□□□ -0.87
CHD1L-205ENST00000467213 Q6ZR54 194 aa9.59□□□□□ -0.87
CHD1L-205ENST00000467213 COA5Q86WW8 74 aa9.59□□□□□ -0.87
CHD1L-205ENST00000467213 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
CHD1L-205ENST00000467213 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
CHD1L-205ENST00000467213 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
CHD1L-205ENST00000467213 PKD1L1Q8TDX9 2849 aa9.57□□□□□ -0.88
CHD1L-205ENST00000467213 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
CHD1L-205ENST00000467213 TRRAPQ9Y4A5 3859 aa9.55□□□□□ -0.88
CHD1L-205ENST00000467213 ANK2Q01484 3957 aa9.55□□□□□ -0.88
CHD1L-205ENST00000467213 KTN1-AS1Q86SY8 53 aa9.55□□□□□ -0.88
CHD1L-205ENST00000467213 KRTAP13-1Q8IUC0 172 aa9.54□□□□□ -0.88
CHD1L-205ENST00000467213 CDC42SE1Q9NRR8 79 aa9.53□□□□□ -0.88
CHD1L-205ENST00000467213 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.88
CHD1L-205ENST00000467213 Q96NJ1 140 aa9.52□□□□□ -0.88
CHD1L-205ENST00000467213 NDUFS5O43920 106 aa9.52□□□□□ -0.89
CHD1L-205ENST00000467213 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
CHD1L-205ENST00000467213 KRTAP11-1Q8IUC1 163 aa9.51□□□□□ -0.89
CHD1L-205ENST00000467213 LCA10Q71F78 164 aa9.51□□□□□ -0.89
CHD1L-205ENST00000467213 CMYA5Q8N3K9 4069 aa9.5□□□□□ -0.89
CHD1L-205ENST00000467213 ATRQ13535 2644 aa9.5□□□□□ -0.89
CHD1L-205ENST00000467213 TENM3Q9P273 2699 aa9.49□□□□□ -0.89
CHD1L-205ENST00000467213 OTOGQ6ZRI0 2925 aa9.49□□□□□ -0.89
CHD1L-205ENST00000467213 A8MU10 97 aa9.48□□□□□ -0.89
CHD1L-205ENST00000467213 LINC00483Q53H64 154 aa9.48□□□□□ -0.89
CHD1L-205ENST00000467213 C8orf17Q9NRJ1 99 aa9.48□□□□□ -0.89
CHD1L-205ENST00000467213 A6NN06 94 aa9.47□□□□□ -0.89
CHD1L-205ENST00000467213 A6NED7 52 aa9.46□□□□□ -0.89
CHD1L-205ENST00000467213 PRB2P02812 416 aaPredicted RBP9.46□□□□□ -0.89
CHD1L-205ENST00000467213 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.9
CHD1L-205ENST00000467213 F8P00451 2351 aa9.44□□□□□ -0.9
CHD1L-205ENST00000467213 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
CHD1L-205ENST00000467213 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.9
CHD1L-205ENST00000467213 CHTF8P0CG12 524 aa9.4□□□□□ -0.91
CHD1L-205ENST00000467213 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.91
CHD1L-205ENST00000467213 HRES1P13985 223 aa9.38□□□□□ -0.91
CHD1L-205ENST00000467213 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
CHD1L-205ENST00000467213 KRTAP24-1Q3LI83 254 aa9.37□□□□□ -0.91
CHD1L-205ENST00000467213 SPTSSBQ8NFR3 76 aa9.36□□□□□ -0.91
CHD1L-205ENST00000467213 TENM2Q9NT68 2774 aa9.35□□□□□ -0.91
CHD1L-205ENST00000467213 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
CHD1L-205ENST00000467213 BAHCC1Q9P281 2608 aa9.34□□□□□ -0.91
CHD1L-205ENST00000467213 SPAG11AQ6PDA7 123 aa9.34□□□□□ -0.91
CHD1L-205ENST00000467213 C7orf65Q6ZTY9 151 aa9.34□□□□□ -0.91
CHD1L-205ENST00000467213 APLNQ9ULZ1 77 aa9.34□□□□□ -0.91
CHD1L-205ENST00000467213 CDK2AP2O75956 126 aa9.33□□□□□ -0.92
CHD1L-205ENST00000467213 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
CHD1L-205ENST00000467213 WWC2-AS2Q96NR7 200 aa9.32□□□□□ -0.92
CHD1L-205ENST00000467213 K7EIL1 84 aa9.31□□□□□ -0.92
CHD1L-205ENST00000467213 KRTAP13-3Q3SY46 172 aa9.31□□□□□ -0.92
CHD1L-205ENST00000467213 SPACA4Q8TDM5 124 aa9.31□□□□□ -0.92
CHD1L-205ENST00000467213 UBE2DNLQ8IWF7 75 aa9.3□□□□□ -0.92
CHD1L-205ENST00000467213 IGHV6-1A0A0B4J1U7 121 aa9.29□□□□□ -0.92
CHD1L-205ENST00000467213 DYNC2H1Q8NCM8 4307 aaKnown RBP9.29□□□□□ -0.92
CHD1L-205ENST00000467213 IGLV9-49A0A0B4J1Y8 123 aa9.29□□□□□ -0.92
CHD1L-205ENST00000467213 DNAH10Q8IVF4 4471 aa9.29□□□□□ -0.92
CHD1L-205ENST00000467213 Q6ZRN7 208 aaPredicted RBP9.27□□□□□ -0.93
CHD1L-205ENST00000467213 A0A087X002 238 aa9.26□□□□□ -0.93
CHD1L-205ENST00000467213 MAST4O15021 2626 aa9.26□□□□□ -0.93
CHD1L-205ENST00000467213 SPINK7P58062 85 aa9.25□□□□□ -0.93
CHD1L-205ENST00000467213 DNAH9Q9NYC9 4486 aa9.25□□□□□ -0.93
CHD1L-205ENST00000467213 PANO1I0J062 215 aa9.25□□□□□ -0.93
CHD1L-205ENST00000467213 LYSTQ99698 3801 aa9.25□□□□□ -0.93
CHD1L-205ENST00000467213 ACYP2P14621 99 aa9.24□□□□□ -0.93
CHD1L-205ENST00000467213 MDFIQ99750 246 aa9.24□□□□□ -0.93
CHD1L-205ENST00000467213 NBDYA0A0U1RRE5 68 aa9.24□□□□□ -0.93
CHD1L-205ENST00000467213 SRRM2Q9UQ35 2752 aaKnown RBP9.23□□□□□ -0.93
CHD1L-205ENST00000467213 ALMS1Q8TCU4 4167 aa9.23□□□□□ -0.93
CHD1L-205ENST00000467213 C8orf87E5RJ46 101 aa9.23□□□□□ -0.93
CHD1L-205ENST00000467213 IGLV5-52A0A0A0MRZ9 124 aa9.21□□□□□ -0.93
CHD1L-205ENST00000467213 CSMD3Q7Z407 3707 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms