RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 C12orf57Q99622 126 aa4.16□□□□□ -1.74
CLDN4-204ENST00000466411 PRO1854Q9UHT4 67 aa4.16□□□□□ -1.74
CLDN4-204ENST00000466411 LOC105371267A0A1B0GV96 52 aa4.15□□□□□ -1.75
CLDN4-204ENST00000466411 Q1RN00 199 aa4.15□□□□□ -1.75
CLDN4-204ENST00000466411 PPDPFLQ8WWR9 84 aa4.15□□□□□ -1.75
CLDN4-204ENST00000466411 A0A1B0GX51 115 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 H3BQ85 93 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 CFC1BP0CG36 223 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 CFC1P0CG37 223 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 LINC00483Q53H64 154 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 OCIAD2Q56VL3 154 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 SMIM11BQ8TCY0 68 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 SMCR5Q8TEV8 140 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 SPRR4Q96PI1 79 aa4.14□□□□□ -1.75
CLDN4-204ENST00000466411 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
CLDN4-204ENST00000466411 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
CLDN4-204ENST00000466411 LYRM7Q5U5X0 104 aa4.13□□□□□ -1.75
CLDN4-204ENST00000466411 Q9BRP9 147 aa4.13□□□□□ -1.75
CLDN4-204ENST00000466411 hADV29S1A0JD25 119 aa4.12□□□□□ -1.75
CLDN4-204ENST00000466411 FXYD2P54710 66 aa4.12□□□□□ -1.75
CLDN4-204ENST00000466411 SPAG11AQ6PDA7 123 aa4.12□□□□□ -1.75
CLDN4-204ENST00000466411 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
CLDN4-204ENST00000466411 TEX49A0A1B0GTD5 131 aa4.11□□□□□ -1.75
CLDN4-204ENST00000466411 SPRR1BP22528 89 aa4.11□□□□□ -1.75
CLDN4-204ENST00000466411 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.11□□□□□ -1.75
CLDN4-204ENST00000466411 LINC00575Q6W349 94 aa4.11□□□□□ -1.75
CLDN4-204ENST00000466411 PRO1933Q9H354 126 aa4.11□□□□□ -1.75
CLDN4-204ENST00000466411 LAMTOR3Q9UHA4 124 aa4.11□□□□□ -1.75
CLDN4-204ENST00000466411 IGLV5-48A0A075B6I7 105 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 F8WEM9 126 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 H7C2G1 150 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 DNAL4O96015 105 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 PSMB2P49721 201 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 GAGE2AQ6NT46 116 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 SSBP3-AS1Q7Z2R9 100 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
CLDN4-204ENST00000466411 RPS29P62273 56 aaKnown RBP4.09□□□□□ -1.75
CLDN4-204ENST00000466411 PRR26Q8N8Z3 221 aa4.09□□□□□ -1.75
CLDN4-204ENST00000466411 Q8NBF4 154 aa4.09□□□□□ -1.75
CLDN4-204ENST00000466411 LINC00304Q8N9R0 145 aa4.08□□□□□ -1.76
CLDN4-204ENST00000466411 A0A087X002 238 aa4.07□□□□□ -1.76
CLDN4-204ENST00000466411 ERC2-IT1O76042 136 aa4.07□□□□□ -1.76
CLDN4-204ENST00000466411 TSPAN13O95857 204 aa4.07□□□□□ -1.76
CLDN4-204ENST00000466411 SPINK1P00995 79 aa4.07□□□□□ -1.76
CLDN4-204ENST00000466411 Q6ZQY7 126 aa4.07□□□□□ -1.76
CLDN4-204ENST00000466411 TRACP01848 142 aa4.06□□□□□ -1.76
CLDN4-204ENST00000466411 SCGB1C2P0DMR2 95 aa4.06□□□□□ -1.76
CLDN4-204ENST00000466411 CD164Q04900 197 aa4.06□□□□□ -1.76
CLDN4-204ENST00000466411 C9orf153Q5TBE3 101 aa4.06□□□□□ -1.76
CLDN4-204ENST00000466411 Q6JHZ5 121 aa4.06□□□□□ -1.76
CLDN4-204ENST00000466411 LIMD2Q9BT23 127 aa4.06□□□□□ -1.76
CLDN4-204ENST00000466411 TRBV20-1A0A075B6N2 111 aa4.05□□□□□ -1.76
CLDN4-204ENST00000466411 IGLV9-49A0A0B4J1Y8 123 aa4.05□□□□□ -1.76
CLDN4-204ENST00000466411 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
CLDN4-204ENST00000466411 K7ERJ3 54 aa4.05□□□□□ -1.76
CLDN4-204ENST00000466411 MOBPQ13875 183 aa4.05□□□□□ -1.76
CLDN4-204ENST00000466411 SNHG12Q9BXW3 62 aa4.05□□□□□ -1.76
CLDN4-204ENST00000466411 ORMDL1Q9P0S3 153 aa4.05□□□□□ -1.76
CLDN4-204ENST00000466411 ATXN8Q156A1 80 aa4.04□□□□□ -1.76
CLDN4-204ENST00000466411 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
CLDN4-204ENST00000466411 ST20-AS1Q8NBB2 130 aa4.04□□□□□ -1.76
CLDN4-204ENST00000466411 DEFB105AQ8NG35 78 aa4.04□□□□□ -1.76
CLDN4-204ENST00000466411 LST1O00453 97 aa4.03□□□□□ -1.76
CLDN4-204ENST00000466411 BATFQ16520 125 aa4.03□□□□□ -1.76
CLDN4-204ENST00000466411 Q8N377 158 aa4.03□□□□□ -1.76
CLDN4-204ENST00000466411 ANAPC11Q9NYG5 84 aa4.03□□□□□ -1.76
CLDN4-204ENST00000466411 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
CLDN4-204ENST00000466411 LINC01547P58512 204 aaPredicted RBP4.02□□□□□ -1.77
CLDN4-204ENST00000466411 COL5A1-AS1Q5SY13 56 aa4.02□□□□□ -1.77
CLDN4-204ENST00000466411 C3orf22Q8N5N4 141 aa4.02□□□□□ -1.77
CLDN4-204ENST00000466411 CLEC2BQ92478 149 aa4.02□□□□□ -1.77
CLDN4-204ENST00000466411 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
CLDN4-204ENST00000466411 FABP2P12104 132 aa4.01□□□□□ -1.77
CLDN4-204ENST00000466411 UBE2V1Q13404 147 aa4.01□□□□□ -1.77
CLDN4-204ENST00000466411 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
CLDN4-204ENST00000466411 TCL1BO95988 128 aa4□□□□□ -1.77
CLDN4-204ENST00000466411 NDUFV3P56181 108 aaKnown RBP4□□□□□ -1.77
CLDN4-204ENST00000466411 Q5XG85 94 aa4□□□□□ -1.77
CLDN4-204ENST00000466411 SMIM29Q86T20 159 aa4□□□□□ -1.77
CLDN4-204ENST00000466411 FAM218AQ96MZ4 157 aa4□□□□□ -1.77
CLDN4-204ENST00000466411 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
CLDN4-204ENST00000466411 SS18L2Q9UHA2 77 aa4□□□□□ -1.77
CLDN4-204ENST00000466411 A0A1B0GW54 56 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 A0A1W2PPM0 123 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 JMJD7-PLA2G4BH0Y9G9 81 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 H3BMG7 143 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 H3BUT2 72 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 PDE6GP18545 87 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 Q6Q795 121 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 TEN1Q86WV5 123 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 MPLKIPQ8TAP9 179 aa3.98□□□□□ -1.77
CLDN4-204ENST00000466411 ANKRD29Q8N6D5 301 aa3.97□□□□□ -1.77
CLDN4-204ENST00000466411 DSCR8Q96T75 97 aa3.97□□□□□ -1.77
CLDN4-204ENST00000466411 H3BT86 120 aa3.96□□□□□ -1.78
CLDN4-204ENST00000466411 TAX1BP3O14907 124 aa3.96□□□□□ -1.78
CLDN4-204ENST00000466411 RBM3P98179 157 aaKnown RBP3.96□□□□□ -1.78
CLDN4-204ENST00000466411 ASB16-AS1Q495Z4 193 aa3.96□□□□□ -1.78
CLDN4-204ENST00000466411 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
CLDN4-204ENST00000466411 BAALC-AS2P0C853 105 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms