RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	LST1	O00453	97 aa		4.7	□□□□□ -1.66
ITSN1-223	ENST00000465143	ELOF1	P60002	83 aa	Known RBP	4.7	□□□□□ -1.66
ITSN1-223	ENST00000465143	LINC00575	Q6W349	94 aa		4.7	□□□□□ -1.66
ITSN1-223	ENST00000465143		B5MCH6	92 aa		4.69	□□□□□ -1.66
ITSN1-223	ENST00000465143	UBE2V1	Q13404	147 aa		4.69	□□□□□ -1.66
ITSN1-223	ENST00000465143	FAM19A1	Q7Z5A9	133 aa		4.69	□□□□□ -1.66
ITSN1-223	ENST00000465143	HERC1	Q15751	4861 aa		4.68	□□□□□ -1.66
ITSN1-223	ENST00000465143	hADV29S1	A0JD25	119 aa		4.68	□□□□□ -1.66
ITSN1-223	ENST00000465143	SLC25A20	O43772	301 aa		4.68	□□□□□ -1.66
ITSN1-223	ENST00000465143	BCE1	O60756	84 aa		4.68	□□□□□ -1.66
ITSN1-223	ENST00000465143	IGLV7-43	P04211	117 aa		4.68	□□□□□ -1.66
ITSN1-223	ENST00000465143		Q6ZRX8	168 aa		4.68	□□□□□ -1.66
ITSN1-223	ENST00000465143		A0A1B0GX51	115 aa		4.67	□□□□□ -1.66
ITSN1-223	ENST00000465143	SNCG	O76070	127 aa		4.67	□□□□□ -1.66
ITSN1-223	ENST00000465143	TRAC	P01848	142 aa		4.67	□□□□□ -1.66
ITSN1-223	ENST00000465143	UBE2A	P49459	152 aa		4.67	□□□□□ -1.66
ITSN1-223	ENST00000465143	PRLH	P81277	87 aa		4.67	□□□□□ -1.66
ITSN1-223	ENST00000465143	MTURN	Q8N3F0	131 aa		4.67	□□□□□ -1.66
ITSN1-223	ENST00000465143		Q9BRP9	147 aa		4.67	□□□□□ -1.66
ITSN1-223	ENST00000465143	DHRS4-AS1	Q9P1J3	65 aa		4.67	□□□□□ -1.66
ITSN1-223	ENST00000465143		C9JAW5	83 aa		4.66	□□□□□ -1.66
ITSN1-223	ENST00000465143	DNAL4	O96015	105 aa		4.66	□□□□□ -1.66
ITSN1-223	ENST00000465143	LINC01600	Q96MT4	127 aa		4.66	□□□□□ -1.66
ITSN1-223	ENST00000465143	LRP1	Q07954	4544 aa	Known RBP	4.65	□□□□□ -1.66
ITSN1-223	ENST00000465143		H0Y9J4	135 aa		4.65	□□□□□ -1.67
ITSN1-223	ENST00000465143	ERC2-IT1	O76042	136 aa		4.65	□□□□□ -1.67
ITSN1-223	ENST00000465143		Q6ZQY7	126 aa		4.65	□□□□□ -1.67
ITSN1-223	ENST00000465143	SMCR5	Q8TEV8	140 aa		4.65	□□□□□ -1.67
ITSN1-223	ENST00000465143	PRO0461	Q9UI25	63 aa		4.65	□□□□□ -1.67
ITSN1-223	ENST00000465143	BAALC-AS2	P0C853	105 aa		4.64	□□□□□ -1.67
ITSN1-223	ENST00000465143	MT1HL1	P0DM35	61 aa		4.64	□□□□□ -1.67
ITSN1-223	ENST00000465143	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.64	□□□□□ -1.67
ITSN1-223	ENST00000465143	KRTAP13-1	Q8IUC0	172 aa		4.64	□□□□□ -1.67
ITSN1-223	ENST00000465143	HIGD2A	Q9BW72	106 aa		4.64	□□□□□ -1.67
ITSN1-223	ENST00000465143	FAT3	Q8TDW7	4589 aa		4.63	□□□□□ -1.67
ITSN1-223	ENST00000465143		F8W1H4	67 aa		4.63	□□□□□ -1.67
ITSN1-223	ENST00000465143	ZNF861P	O60384	105 aa		4.63	□□□□□ -1.67
ITSN1-223	ENST00000465143	ST20-AS1	Q8NBB2	130 aa		4.63	□□□□□ -1.67
ITSN1-223	ENST00000465143	ORMDL1	Q9P0S3	153 aa		4.63	□□□□□ -1.67
ITSN1-223	ENST00000465143		H3BT86	120 aa		4.62	□□□□□ -1.67
ITSN1-223	ENST00000465143	ANKRD29	Q8N6D5	301 aa		4.62	□□□□□ -1.67
ITSN1-223	ENST00000465143	DEFB105A	Q8NG35	78 aa		4.62	□□□□□ -1.67
ITSN1-223	ENST00000465143	OCIAD2	Q56VL3	154 aa		4.61	□□□□□ -1.67
ITSN1-223	ENST00000465143		H3BQ85	93 aa		4.6	□□□□□ -1.67
ITSN1-223	ENST00000465143	TMEM256-PLSCR3	K7ERE1	68 aa		4.6	□□□□□ -1.67
ITSN1-223	ENST00000465143	LINC01547	P58512	204 aa	Predicted RBP	4.6	□□□□□ -1.67
ITSN1-223	ENST00000465143	PRR26	Q8N8Z3	221 aa		4.6	□□□□□ -1.67
ITSN1-223	ENST00000465143	IGLV5-48	A0A075B6I7	105 aa		4.59	□□□□□ -1.67
ITSN1-223	ENST00000465143	KRTAP10-8	P60410	259 aa		4.59	□□□□□ -1.67
ITSN1-223	ENST00000465143		Q8N377	158 aa		4.59	□□□□□ -1.67
ITSN1-223	ENST00000465143	PKHD1L1	Q86WI1	4243 aa		4.59	□□□□□ -1.68
ITSN1-223	ENST00000465143	TEX49	A0A1B0GTD5	131 aa		4.58	□□□□□ -1.68
ITSN1-223	ENST00000465143	ETDB	Q3ZM63	59 aa		4.58	□□□□□ -1.68
ITSN1-223	ENST00000465143	GAGE2A	Q6NT46	116 aa		4.58	□□□□□ -1.68
ITSN1-223	ENST00000465143	PPDPFL	Q8WWR9	84 aa		4.58	□□□□□ -1.68
ITSN1-223	ENST00000465143		A0A1B0GV72	72 aa		4.57	□□□□□ -1.68
ITSN1-223	ENST00000465143	NDUFV3	P56181	108 aa	Known RBP	4.57	□□□□□ -1.68
ITSN1-223	ENST00000465143	TEN1	Q86WV5	123 aa		4.57	□□□□□ -1.68
ITSN1-223	ENST00000465143	SPRR4	Q96PI1	79 aa		4.57	□□□□□ -1.68
ITSN1-223	ENST00000465143	LAMTOR3	Q9UHA4	124 aa		4.57	□□□□□ -1.68
ITSN1-223	ENST00000465143	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.57	□□□□□ -1.68
ITSN1-223	ENST00000465143	HMCN2	Q8NDA2	5059 aa		4.57	□□□□□ -1.68
ITSN1-223	ENST00000465143	KRTAP1-4	P0C5Y4	121 aa		4.56	□□□□□ -1.68
ITSN1-223	ENST00000465143	SPRR1B	P22528	89 aa		4.56	□□□□□ -1.68
ITSN1-223	ENST00000465143	SMIM29	Q86T20	159 aa		4.56	□□□□□ -1.68
ITSN1-223	ENST00000465143	C3orf22	Q8N5N4	141 aa		4.56	□□□□□ -1.68
ITSN1-223	ENST00000465143	CRYGA	P11844	174 aa		4.55	□□□□□ -1.68
ITSN1-223	ENST00000465143	OBSCN-AS1	Q96MR7	158 aa		4.55	□□□□□ -1.68
ITSN1-223	ENST00000465143	ANAPC11	Q9NYG5	84 aa		4.55	□□□□□ -1.68
ITSN1-223	ENST00000465143	LINC00483	Q53H64	154 aa		4.54	□□□□□ -1.68
ITSN1-223	ENST00000465143		F8WEM9	126 aa		4.53	□□□□□ -1.68
ITSN1-223	ENST00000465143	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.53	□□□□□ -1.68
ITSN1-223	ENST00000465143	RBM3	P98179	157 aa	Known RBP	4.53	□□□□□ -1.68
ITSN1-223	ENST00000465143	CDIP1	Q9H305	208 aa		4.53	□□□□□ -1.68
ITSN1-223	ENST00000465143	C14orf132	Q9NPU4	83 aa		4.53	□□□□□ -1.68
ITSN1-223	ENST00000465143	TNXB	P22105	4242 aa		4.53	□□□□□ -1.68
ITSN1-223	ENST00000465143	IGLV9-49	A0A0B4J1Y8	123 aa		4.52	□□□□□ -1.69
ITSN1-223	ENST00000465143	TYMSOS	Q8TAI1	123 aa		4.52	□□□□□ -1.69
ITSN1-223	ENST00000465143		A0A087X002	238 aa		4.51	□□□□□ -1.69
ITSN1-223	ENST00000465143	FAM229B	Q4G0N7	80 aa		4.51	□□□□□ -1.69
ITSN1-223	ENST00000465143	DSCR8	Q96T75	97 aa		4.51	□□□□□ -1.69
ITSN1-223	ENST00000465143	IGLV8-61	A0A075B6I0	122 aa		4.5	□□□□□ -1.69
ITSN1-223	ENST00000465143	LOC110117498	A0A087WWA1	95 aa		4.5	□□□□□ -1.69
ITSN1-223	ENST00000465143		A0A0G2JQZ4	141 aa		4.5	□□□□□ -1.69
ITSN1-223	ENST00000465143	C9orf153	Q5TBE3	101 aa		4.5	□□□□□ -1.69
ITSN1-223	ENST00000465143		Q6ZQT0	140 aa		4.5	□□□□□ -1.69
ITSN1-223	ENST00000465143	TRBV7-4	A0A0J9YYF1	115 aa		4.49	□□□□□ -1.69
ITSN1-223	ENST00000465143	MOBP	Q13875	183 aa		4.49	□□□□□ -1.69
ITSN1-223	ENST00000465143	UBR4	Q5T4S7	5183 aa		4.49	□□□□□ -1.69
ITSN1-223	ENST00000465143	CCK	P06307	115 aa		4.48	□□□□□ -1.69
ITSN1-223	ENST00000465143	PDE6G	P18545	87 aa		4.48	□□□□□ -1.69
ITSN1-223	ENST00000465143	KRTAP13-2	Q52LG2	175 aa		4.48	□□□□□ -1.69
ITSN1-223	ENST00000465143		Q6JHZ5	121 aa		4.48	□□□□□ -1.69
ITSN1-223	ENST00000465143	IGFL1	Q6UW32	110 aa		4.48	□□□□□ -1.69
ITSN1-223	ENST00000465143		Q8NBF4	154 aa		4.48	□□□□□ -1.69
ITSN1-223	ENST00000465143		A0A1W2PNM2	257 aa		4.47	□□□□□ -1.69
ITSN1-223	ENST00000465143		J3QR89	54 aa		4.47	□□□□□ -1.69
ITSN1-223	ENST00000465143	PRR4	Q16378	134 aa		4.47	□□□□□ -1.69
ITSN1-223	ENST00000465143	LINC00304	Q8N9R0	145 aa		4.47	□□□□□ -1.69
ITSN1-223	ENST00000465143	VPS25	Q9BRG1	176 aa		4.47	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms