RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 H0YAA0 97 aa1.26□□□□□ -2.21
HMGXB4-205ENST00000464480 RPL37P61927 97 aaKnown RBP1.26□□□□□ -2.21
HMGXB4-205ENST00000464480 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
HMGXB4-205ENST00000464480 CLPSL2Q6UWE3 100 aa1.26□□□□□ -2.21
HMGXB4-205ENST00000464480 RHPN1-AS1Q9BWJ2 59 aa1.26□□□□□ -2.21
HMGXB4-205ENST00000464480 TPRP12270 2363 aaKnown RBP1.26□□□□□ -2.21
HMGXB4-205ENST00000464480 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.26□□□□□ -2.21
HMGXB4-205ENST00000464480 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
HMGXB4-205ENST00000464480 Q6ZSA8 131 aa1.25□□□□□ -2.21
HMGXB4-205ENST00000464480 DEFB108BQ8NET1 73 aa1.25□□□□□ -2.21
HMGXB4-205ENST00000464480 WNK2Q9Y3S1 2297 aa1.24□□□□□ -2.21
HMGXB4-205ENST00000464480 H3BUX3 64 aa1.24□□□□□ -2.21
HMGXB4-205ENST00000464480 CD52P31358 61 aa1.24□□□□□ -2.21
HMGXB4-205ENST00000464480 COL6A6A6NMZ7 2263 aa1.23□□□□□ -2.21
HMGXB4-205ENST00000464480 DEFB130BP0DP73 79 aa1.23□□□□□ -2.21
HMGXB4-205ENST00000464480 DEFB130AP0DP74 79 aa1.23□□□□□ -2.21
HMGXB4-205ENST00000464480 HTN1P15515 57 aa1.23□□□□□ -2.21
HMGXB4-205ENST00000464480 SPRR1AP35321 89 aa1.23□□□□□ -2.21
HMGXB4-205ENST00000464480 UNQ6190/PRO20217Q6UXQ8 127 aa1.23□□□□□ -2.21
HMGXB4-205ENST00000464480 PRLHP81277 87 aa1.22□□□□□ -2.21
HMGXB4-205ENST00000464480 SPRR1BP22528 89 aa1.21□□□□□ -2.22
HMGXB4-205ENST00000464480 DEFB1P60022 68 aa1.21□□□□□ -2.22
HMGXB4-205ENST00000464480 CEP350Q5VT06 3117 aa1.21□□□□□ -2.22
HMGXB4-205ENST00000464480 SPTBN1Q01082 2364 aaKnown RBP1.2□□□□□ -2.22
HMGXB4-205ENST00000464480 WNK1Q9H4A3 2382 aa1.2□□□□□ -2.22
HMGXB4-205ENST00000464480 LYNX1P0DP58 116 aa1.2□□□□□ -2.22
HMGXB4-205ENST00000464480 NOP10Q9NPE3 64 aaKnown RBP1.2□□□□□ -2.22
HMGXB4-205ENST00000464480 PIEZO1Q92508 2521 aa1.2□□□□□ -2.22
HMGXB4-205ENST00000464480 RP1L1Q8IWN7 2480 aaPredicted RBP1.2□□□□□ -2.22
HMGXB4-205ENST00000464480 ZDBF2Q9HCK1 2354 aa1.19□□□□□ -2.22
HMGXB4-205ENST00000464480 K7EIL1 84 aa1.19□□□□□ -2.22
HMGXB4-205ENST00000464480 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
HMGXB4-205ENST00000464480 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
HMGXB4-205ENST00000464480 PRO0255Q9UI72 69 aa1.19□□□□□ -2.22
HMGXB4-205ENST00000464480 SPINK1P00995 79 aa1.18□□□□□ -2.22
HMGXB4-205ENST00000464480 TTC28Q96AY4 2481 aa1.17□□□□□ -2.22
HMGXB4-205ENST00000464480 LELP1Q5T871 98 aa1.17□□□□□ -2.22
HMGXB4-205ENST00000464480 APLNQ9ULZ1 77 aa1.17□□□□□ -2.22
HMGXB4-205ENST00000464480 IGF2RP11717 2491 aa1.17□□□□□ -2.22
HMGXB4-205ENST00000464480 ALMS1Q8TCU4 4167 aa1.17□□□□□ -2.22
HMGXB4-205ENST00000464480 FLG2Q5D862 2391 aaPredicted RBP1.16□□□□□ -2.22
HMGXB4-205ENST00000464480 AKAP6Q13023 2319 aa1.16□□□□□ -2.22
HMGXB4-205ENST00000464480 GOLGB1Q14789 3259 aaKnown RBP1.16□□□□□ -2.22
HMGXB4-205ENST00000464480 PKDREJQ9NTG1 2253 aa1.16□□□□□ -2.22
HMGXB4-205ENST00000464480 CEP290O15078 2479 aa1.16□□□□□ -2.22
HMGXB4-205ENST00000464480 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
HMGXB4-205ENST00000464480 UTRNP46939 3433 aa1.16□□□□□ -2.22
HMGXB4-205ENST00000464480 FBN3Q75N90 2809 aa1.16□□□□□ -2.22
HMGXB4-205ENST00000464480 PTPRZ1P23471 2315 aaPredicted RBP1.15□□□□□ -2.23
HMGXB4-205ENST00000464480 PCNX1Q96RV3 2341 aa1.15□□□□□ -2.23
HMGXB4-205ENST00000464480 SPTA1P02549 2419 aa1.15□□□□□ -2.23
HMGXB4-205ENST00000464480 FAM208BQ5VWN6 2430 aa1.15□□□□□ -2.23
HMGXB4-205ENST00000464480 S4R3F8 94 aa1.15□□□□□ -2.23
HMGXB4-205ENST00000464480 ACACAQ13085 2346 aa1.15□□□□□ -2.23
HMGXB4-205ENST00000464480 DEFB133Q30KQ1 61 aa1.14□□□□□ -2.23
HMGXB4-205ENST00000464480 DEFB124Q8NES8 71 aa1.14□□□□□ -2.23
HMGXB4-205ENST00000464480 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
HMGXB4-205ENST00000464480 CACNA1HO95180 2353 aa1.14□□□□□ -2.23
HMGXB4-205ENST00000464480 NCOR1O75376 2440 aa1.13□□□□□ -2.23
HMGXB4-205ENST00000464480 DEFB136Q30KP8 78 aa1.13□□□□□ -2.23
HMGXB4-205ENST00000464480 Q5VSD8 79 aa1.13□□□□□ -2.23
HMGXB4-205ENST00000464480 FAM186AA6NE01 2351 aa1.12□□□□□ -2.23
HMGXB4-205ENST00000464480 MAP1BP46821 2468 aaKnown RBP1.12□□□□□ -2.23
HMGXB4-205ENST00000464480 PIEZO2Q9H5I5 2752 aa1.12□□□□□ -2.23
HMGXB4-205ENST00000464480 SPTBN2O15020 2390 aa1.11□□□□□ -2.23
HMGXB4-205ENST00000464480 CACNA1AO00555 2505 aa1.11□□□□□ -2.23
HMGXB4-205ENST00000464480 A0A0D9SG42 100 aa1.11□□□□□ -2.23
HMGXB4-205ENST00000464480 HTTP42858 3142 aa1.11□□□□□ -2.23
HMGXB4-205ENST00000464480 ROS1P08922 2347 aa1.11□□□□□ -2.23
HMGXB4-205ENST00000464480 RIF1Q5UIP0 2472 aaKnown RBP1.11□□□□□ -2.23
HMGXB4-205ENST00000464480 WDR87Q6ZQQ6 2873 aa1.1□□□□□ -2.23
HMGXB4-205ENST00000464480 GVINP1Q7Z2Y8 2422 aa1.1□□□□□ -2.23
HMGXB4-205ENST00000464480 CSPG4Q6UVK1 2322 aa1.1□□□□□ -2.23
HMGXB4-205ENST00000464480 PKD1L2Q7Z442 2459 aa1.1□□□□□ -2.23
HMGXB4-205ENST00000464480 CHD8Q9HCK8 2581 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 EP300Q09472 2414 aaPredicted RBP1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 CEP250Q9BV73 2442 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 ACACBO00763 2458 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 JMJD1CQ15652 2540 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 ZNF462Q96JM2 2506 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 A0A096LNI7 61 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 H3BNG1 76 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 M0QZ58 72 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 SPINK6Q6UWN8 80 aa1.09□□□□□ -2.23
HMGXB4-205ENST00000464480 PCNTO95613 3336 aa1.09□□□□□ -2.24
HMGXB4-205ENST00000464480 NCOR2Q9Y618 2525 aa1.09□□□□□ -2.24
HMGXB4-205ENST00000464480 APC2O95996 2303 aa1.08□□□□□ -2.24
HMGXB4-205ENST00000464480 A0A096LPF7 62 aa1.08□□□□□ -2.24
HMGXB4-205ENST00000464480 RANBP2P49792 3224 aaKnown RBP1.08□□□□□ -2.24
HMGXB4-205ENST00000464480 A0A0C4DFX4 3053 aa1.08□□□□□ -2.24
HMGXB4-205ENST00000464480 MKI67P46013 3256 aaKnown RBP1.07□□□□□ -2.24
HMGXB4-205ENST00000464480 SPTBN4Q9H254 2564 aa1.07□□□□□ -2.24
HMGXB4-205ENST00000464480 TNRC18O15417 2968 aaPredicted RBP1.07□□□□□ -2.24
HMGXB4-205ENST00000464480 SPART-AS1P0CW21 52 aa1.07□□□□□ -2.24
HMGXB4-205ENST00000464480 LINC01556Q5JQF7 62 aa1.07□□□□□ -2.24
HMGXB4-205ENST00000464480 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
HMGXB4-205ENST00000464480 BDP1A6H8Y1 2624 aa1.07□□□□□ -2.24
HMGXB4-205ENST00000464480 LAMA3Q16787 3333 aa1.07□□□□□ -2.24
HMGXB4-205ENST00000464480 EPG5Q9HCE0 2579 aa1.06□□□□□ -2.24
HMGXB4-205ENST00000464480 KRTAP10-4P60372 401 aaPredicted RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms