RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 C2CD3Q4AC94 2353 aa2.34□□□□□ -2.03
SGCE-209ENST00000462731 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
SGCE-209ENST00000462731 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
SGCE-209ENST00000462731 CDKN2A-AS1Q9UH64 79 aa2.34□□□□□ -2.03
SGCE-209ENST00000462731 MYO9AB2RTY4 2548 aa2.34□□□□□ -2.04
SGCE-209ENST00000462731 HELZ2Q9BYK8 2649 aaKnown RBP2.34□□□□□ -2.04
SGCE-209ENST00000462731 MYO15AQ9UKN7 3530 aa2.33□□□□□ -2.04
SGCE-209ENST00000462731 RELNP78509 3460 aa2.32□□□□□ -2.04
SGCE-209ENST00000462731 DMDP11532 3685 aa2.32□□□□□ -2.04
SGCE-209ENST00000462731 CFAP46Q8IYW2 2715 aa2.32□□□□□ -2.04
SGCE-209ENST00000462731 OTOGLQ3ZCN5 2332 aa2.31□□□□□ -2.04
SGCE-209ENST00000462731 Q6ZSA8 131 aa2.31□□□□□ -2.04
SGCE-209ENST00000462731 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.3□□□□□ -2.04
SGCE-209ENST00000462731 Q8IZM0 81 aa2.3□□□□□ -2.04
SGCE-209ENST00000462731 PRO0255Q9UI72 69 aa2.3□□□□□ -2.04
SGCE-209ENST00000462731 SPTAN1Q13813 2472 aaKnown RBP2.3□□□□□ -2.04
SGCE-209ENST00000462731 RP1L1Q8IWN7 2480 aaPredicted RBP2.3□□□□□ -2.04
SGCE-209ENST00000462731 TRPM2O94759 1503 aa2.29□□□□□ -2.04
SGCE-209ENST00000462731 KRTAP21-3Q3LHN1 58 aa2.29□□□□□ -2.04
SGCE-209ENST00000462731 FAM186AA6NE01 2351 aa2.29□□□□□ -2.04
SGCE-209ENST00000462731 SPTBN2O15020 2390 aa2.29□□□□□ -2.04
SGCE-209ENST00000462731 PTPRZ1P23471 2315 aaPredicted RBP2.29□□□□□ -2.04
SGCE-209ENST00000462731 CNOT1A5YKK6 2376 aaKnown RBP2.28□□□□□ -2.04
SGCE-209ENST00000462731 NDUFA3O95167 84 aa2.28□□□□□ -2.04
SGCE-209ENST00000462731 LINC00158P58513 81 aa2.28□□□□□ -2.04
SGCE-209ENST00000462731 CLTCL1P53675 1640 aa2.28□□□□□ -2.05
SGCE-209ENST00000462731 RIF1Q5UIP0 2472 aaKnown RBP2.27□□□□□ -2.05
SGCE-209ENST00000462731 PRO3102Q9H379 93 aa2.27□□□□□ -2.05
SGCE-209ENST00000462731 SPG11Q96JI7 2443 aa2.27□□□□□ -2.05
SGCE-209ENST00000462731 ABCA2Q9BZC7 2435 aa2.27□□□□□ -2.05
SGCE-209ENST00000462731 SORL1Q92673 2214 aa2.26□□□□□ -2.05
SGCE-209ENST00000462731 LYNX1G3V0Z9 82 aa2.26□□□□□ -2.05
SGCE-209ENST00000462731 GVINP1Q7Z2Y8 2422 aa2.26□□□□□ -2.05
SGCE-209ENST00000462731 KALRNO60229 2985 aa2.25□□□□□ -2.05
SGCE-209ENST00000462731 POLQO75417 2590 aa2.25□□□□□ -2.05
SGCE-209ENST00000462731 TEX15Q9BXT5 2789 aa2.25□□□□□ -2.05
SGCE-209ENST00000462731 DMXL1Q9Y485 3027 aa2.25□□□□□ -2.05
SGCE-209ENST00000462731 NBPF19A0A087WUL8 3843 aa2.25□□□□□ -2.05
SGCE-209ENST00000462731 A0A0D9SG42 100 aa2.24□□□□□ -2.05
SGCE-209ENST00000462731 Q5VSD8 79 aa2.24□□□□□ -2.05
SGCE-209ENST00000462731 SETD2Q9BYW2 2564 aaPredicted RBP2.24□□□□□ -2.05
SGCE-209ENST00000462731 CACNA1HO95180 2353 aa2.23□□□□□ -2.05
SGCE-209ENST00000462731 TOGARAM1Q9Y4F4 1720 aa2.23□□□□□ -2.05
SGCE-209ENST00000462731 TMEM167BQ9NRX6 74 aa2.23□□□□□ -2.05
SGCE-209ENST00000462731 CELSR3Q9NYQ7 3312 aa2.23□□□□□ -2.05
SGCE-209ENST00000462731 FRYQ5TBA9 3013 aa2.23□□□□□ -2.05
SGCE-209ENST00000462731 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
SGCE-209ENST00000462731 DOPEY2Q9Y3R5 2298 aa2.22□□□□□ -2.05
SGCE-209ENST00000462731 SPTA1P02549 2419 aa2.22□□□□□ -2.05
SGCE-209ENST00000462731 FBN2P35556 2912 aa2.22□□□□□ -2.05
SGCE-209ENST00000462731 CDC42BPAQ5VT25 1732 aa2.22□□□□□ -2.05
SGCE-209ENST00000462731 NFAT5O94916 1531 aa2.22□□□□□ -2.05
SGCE-209ENST00000462731 UBR5O95071 2799 aaPredicted RBP2.21□□□□□ -2.05
SGCE-209ENST00000462731 PIEZO2Q9H5I5 2752 aa2.21□□□□□ -2.05
SGCE-209ENST00000462731 LOC400499M0QZD8 3231 aa2.21□□□□□ -2.06
SGCE-209ENST00000462731 COL6A6A6NMZ7 2263 aa2.21□□□□□ -2.06
SGCE-209ENST00000462731 SPRR1AP35321 89 aa2.21□□□□□ -2.06
SGCE-209ENST00000462731 TENM4Q6N022 2769 aa2.21□□□□□ -2.06
SGCE-209ENST00000462731 ZZEF1O43149 2961 aa2.2□□□□□ -2.06
SGCE-209ENST00000462731 PCLOQ9Y6V0 5065 aa2.2□□□□□ -2.06
SGCE-209ENST00000462731 SPINK4O60575 86 aa2.2□□□□□ -2.06
SGCE-209ENST00000462731 TIMM8BQ9Y5J9 83 aaPredicted RBP2.2□□□□□ -2.06
SGCE-209ENST00000462731 GCC2Q8IWJ2 1684 aa2.2□□□□□ -2.06
SGCE-209ENST00000462731 VPS13AQ96RL7 3174 aa2.19□□□□□ -2.06
SGCE-209ENST00000462731 H0YAA0 97 aa2.19□□□□□ -2.06
SGCE-209ENST00000462731 C4AP0C0L4 1744 aa2.19□□□□□ -2.06
SGCE-209ENST00000462731 TLN1Q9Y490 2541 aaKnown RBP2.18□□□□□ -2.06
SGCE-209ENST00000462731 C4BP0C0L5 1744 aa2.18□□□□□ -2.06
SGCE-209ENST00000462731 LOC730098B7Z3J9 87 aa2.18□□□□□ -2.06
SGCE-209ENST00000462731 WDFY3Q8IZQ1 3526 aa2.18□□□□□ -2.06
SGCE-209ENST00000462731 WDR87Q6ZQQ6 2873 aa2.17□□□□□ -2.06
SGCE-209ENST00000462731 PCNX1Q96RV3 2341 aa2.17□□□□□ -2.06
SGCE-209ENST00000462731 LINC00308Q8TCZ7 52 aa2.17□□□□□ -2.06
SGCE-209ENST00000462731 DDX60Q8IY21 1712 aaKnown RBP2.17□□□□□ -2.06
SGCE-209ENST00000462731 RYR3Q15413 4870 aa2.17□□□□□ -2.06
SGCE-209ENST00000462731 NBEAQ8NFP9 2946 aa2.16□□□□□ -2.06
SGCE-209ENST00000462731 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
SGCE-209ENST00000462731 ROS1P08922 2347 aa2.16□□□□□ -2.06
SGCE-209ENST00000462731 LELP1Q5T871 98 aa2.16□□□□□ -2.06
SGCE-209ENST00000462731 PLCE1Q9P212 2302 aa2.16□□□□□ -2.06
SGCE-209ENST00000462731 BIRC6Q9NR09 4857 aa2.16□□□□□ -2.06
SGCE-209ENST00000462731 APLNQ9ULZ1 77 aa2.15□□□□□ -2.07
SGCE-209ENST00000462731 IGF2RP11717 2491 aa2.15□□□□□ -2.07
SGCE-209ENST00000462731 IGSF10Q6WRI0 2623 aa2.15□□□□□ -2.07
SGCE-209ENST00000462731 LMO7Q8WWI1 1683 aa2.15□□□□□ -2.07
SGCE-209ENST00000462731 CEP295Q9C0D2 2601 aa2.14□□□□□ -2.07
SGCE-209ENST00000462731 KRTAP10-4P60372 401 aaPredicted RBP2.14□□□□□ -2.07
SGCE-209ENST00000462731 PRB3Q04118 309 aaPredicted RBP2.14□□□□□ -2.07
SGCE-209ENST00000462731 RYR1P21817 5038 aa2.14□□□□□ -2.07
SGCE-209ENST00000462731 EP300Q09472 2414 aaPredicted RBP2.13□□□□□ -2.07
SGCE-209ENST00000462731 CREBBPQ92793 2442 aa2.13□□□□□ -2.07
SGCE-209ENST00000462731 TRIOO75962 3097 aa2.13□□□□□ -2.07
SGCE-209ENST00000462731 LAMA5O15230 3695 aa2.13□□□□□ -2.07
SGCE-209ENST00000462731 SPRR1BP22528 89 aa2.13□□□□□ -2.07
SGCE-209ENST00000462731 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
SGCE-209ENST00000462731 MINOS1Q5TGZ0 78 aa2.13□□□□□ -2.07
SGCE-209ENST00000462731 DEFB105AQ8NG35 78 aa2.13□□□□□ -2.07
SGCE-209ENST00000462731 LRRK2Q5S007 2527 aa2.13□□□□□ -2.07
SGCE-209ENST00000462731 FREM2Q5SZK8 3169 aa2.12□□□□□ -2.07
SGCE-209ENST00000462731 PTPRQQ9UMZ3 2332 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms