RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PDZD2O15018 2839 aa2.2□□□□□ -2.06
COL8A1-204ENST00000462604 UNC79Q9P2D8 2635 aa2.2□□□□□ -2.06
COL8A1-204ENST00000462604 A0A0G2JQZ4 141 aa2.2□□□□□ -2.06
COL8A1-204ENST00000462604 A0A1W2PNN7 141 aa2.2□□□□□ -2.06
COL8A1-204ENST00000462604 LRCOL1A6NCL2 159 aa2.2□□□□□ -2.06
COL8A1-204ENST00000462604 KRTAP29-1A8MX34 341 aaPredicted RBP2.2□□□□□ -2.06
COL8A1-204ENST00000462604 RPL37AP61513 92 aaKnown RBP2.2□□□□□ -2.06
COL8A1-204ENST00000462604 KRTAP24-1Q3LI83 254 aa2.2□□□□□ -2.06
COL8A1-204ENST00000462604 LCE2AQ5TA79 106 aaPredicted RBP2.2□□□□□ -2.06
COL8A1-204ENST00000462604 GCN1Q92616 2671 aaKnown RBP2.2□□□□□ -2.06
COL8A1-204ENST00000462604 CMYA5Q8N3K9 4069 aa2.19□□□□□ -2.06
COL8A1-204ENST00000462604 PSPHP1O15172 72 aa2.19□□□□□ -2.06
COL8A1-204ENST00000462604 PHF5AQ7RTV0 110 aaKnown RBP2.19□□□□□ -2.06
COL8A1-204ENST00000462604 LIMD2Q9BT23 127 aa2.19□□□□□ -2.06
COL8A1-204ENST00000462604 MTORP42345 2549 aa2.19□□□□□ -2.06
COL8A1-204ENST00000462604 ANK2Q01484 3957 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 SETD2Q9BYW2 2564 aaPredicted RBP2.18□□□□□ -2.06
COL8A1-204ENST00000462604 NBEAL2Q6ZNJ1 2754 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 MMP24-AS1A0A0U1RRL7 71 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 A8MUN3 132 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 CDK2AP2O75956 126 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 PRB2P02812 416 aaPredicted RBP2.18□□□□□ -2.06
COL8A1-204ENST00000462604 SEC61BP60468 96 aaKnown RBP2.18□□□□□ -2.06
COL8A1-204ENST00000462604 MOBPQ13875 183 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 KRTAP1-5Q9BYS1 174 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 LINC00472Q9H8W2 130 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 TP53AIP1Q9HCN2 124 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 ZNF706Q9Y5V0 76 aaPredicted RBP2.18□□□□□ -2.06
COL8A1-204ENST00000462604 TENM4Q6N022 2769 aa2.18□□□□□ -2.06
COL8A1-204ENST00000462604 FN1P02751 2386 aaKnown RBP2.17□□□□□ -2.06
COL8A1-204ENST00000462604 CHKB-CPT1BH3BT56 60 aa2.17□□□□□ -2.06
COL8A1-204ENST00000462604 K7EIL1 84 aa2.17□□□□□ -2.06
COL8A1-204ENST00000462604 CHTF8P0CG12 524 aa2.17□□□□□ -2.06
COL8A1-204ENST00000462604 LCE2CQ5TA81 110 aa2.17□□□□□ -2.06
COL8A1-204ENST00000462604 Q5VV11 94 aa2.17□□□□□ -2.06
COL8A1-204ENST00000462604 COA5Q86WW8 74 aa2.17□□□□□ -2.06
COL8A1-204ENST00000462604 C9orf163Q8N9P6 203 aa2.17□□□□□ -2.06
COL8A1-204ENST00000462604 NF1P21359 2839 aa2.17□□□□□ -2.06
COL8A1-204ENST00000462604 DYNC2H1Q8NCM8 4307 aaKnown RBP2.16□□□□□ -2.06
COL8A1-204ENST00000462604 IGLV7-46A0A075B6I9 117 aa2.16□□□□□ -2.06
COL8A1-204ENST00000462604 IGLV9-49A0A0B4J1Y8 123 aa2.16□□□□□ -2.06
COL8A1-204ENST00000462604 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
COL8A1-204ENST00000462604 KRTAP13-1Q8IUC0 172 aa2.16□□□□□ -2.06
COL8A1-204ENST00000462604 KRTAP11-1Q8IUC1 163 aa2.16□□□□□ -2.06
COL8A1-204ENST00000462604 Q8N9P0 234 aaPredicted RBP2.16□□□□□ -2.06
COL8A1-204ENST00000462604 C8orf17Q9NRJ1 99 aa2.16□□□□□ -2.06
COL8A1-204ENST00000462604 APLNQ9ULZ1 77 aa2.16□□□□□ -2.06
COL8A1-204ENST00000462604 HUWE1Q7Z6Z7 4374 aaKnown RBP2.16□□□□□ -2.06
COL8A1-204ENST00000462604 FASNP49327 2511 aaKnown RBP2.16□□□□□ -2.06
COL8A1-204ENST00000462604 ACANP16112 2415 aa2.16□□□□□ -2.06
COL8A1-204ENST00000462604 NBDYA0A0U1RRE5 68 aa2.15□□□□□ -2.07
COL8A1-204ENST00000462604 A0A1B0GVX0 72 aa2.15□□□□□ -2.07
COL8A1-204ENST00000462604 LCE2BO14633 110 aa2.15□□□□□ -2.07
COL8A1-204ENST00000462604 NDUFS5O43920 106 aa2.15□□□□□ -2.07
COL8A1-204ENST00000462604 LINC00483Q53H64 154 aa2.15□□□□□ -2.07
COL8A1-204ENST00000462604 PCOTHQ58A44 107 aa2.15□□□□□ -2.07
COL8A1-204ENST00000462604 TRRAPQ9Y4A5 3859 aa2.15□□□□□ -2.07
COL8A1-204ENST00000462604 VWFP04275 2813 aa2.15□□□□□ -2.07
COL8A1-204ENST00000462604 OTOGQ6ZRI0 2925 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 HIVEP1P15822 2718 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 IGHV6-1A0A0B4J1U7 121 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 LOC101927531A0A1B0GV80 90 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 KRTAP23-1A1A580 65 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 A6NED7 52 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 NUPR2A6NF83 97 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 CD164Q04900 197 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 ASB16-AS1Q495Z4 193 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 Q6ZR54 194 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 SPACA4Q8TDM5 124 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 Q96NJ1 140 aa2.14□□□□□ -2.07
COL8A1-204ENST00000462604 ATP11AUNQ6ZP68 121 aa2.13□□□□□ -2.07
COL8A1-204ENST00000462604 MRPL34Q9BQ48 92 aaKnown RBP2.13□□□□□ -2.07
COL8A1-204ENST00000462604 LINC01558Q9Y6Z2 57 aa2.13□□□□□ -2.07
COL8A1-204ENST00000462604 NOTCH2Q04721 2471 aa2.13□□□□□ -2.07
COL8A1-204ENST00000462604 NSD1Q96L73 2696 aaPredicted RBP2.13□□□□□ -2.07
COL8A1-204ENST00000462604 TENM1Q9UKZ4 2725 aa2.12□□□□□ -2.07
COL8A1-204ENST00000462604 IGLV5-52A0A0A0MRZ9 124 aa2.12□□□□□ -2.07
COL8A1-204ENST00000462604 PANO1I0J062 215 aa2.12□□□□□ -2.07
COL8A1-204ENST00000462604 Q6ZRN7 208 aaPredicted RBP2.12□□□□□ -2.07
COL8A1-204ENST00000462604 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
COL8A1-204ENST00000462604 CDC42SE1Q9NRR8 79 aa2.12□□□□□ -2.07
COL8A1-204ENST00000462604 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.12□□□□□ -2.07
COL8A1-204ENST00000462604 A0A087WTM6 91 aa2.11□□□□□ -2.07
COL8A1-204ENST00000462604 C8orf87E5RJ46 101 aa2.11□□□□□ -2.07
COL8A1-204ENST00000462604 RTL8CO15255 209 aa2.11□□□□□ -2.07
COL8A1-204ENST00000462604 ZNF861PO60384 105 aa2.11□□□□□ -2.07
COL8A1-204ENST00000462604 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
COL8A1-204ENST00000462604 WWC2-AS2Q96NR7 200 aa2.11□□□□□ -2.07
COL8A1-204ENST00000462604 HECTD1Q9ULT8 2610 aa2.11□□□□□ -2.07
COL8A1-204ENST00000462604 ITPR2Q14571 2701 aa2.11□□□□□ -2.07
COL8A1-204ENST00000462604 ATRQ13535 2644 aa2.1□□□□□ -2.07
COL8A1-204ENST00000462604 HRES1P13985 223 aa2.1□□□□□ -2.07
COL8A1-204ENST00000462604 LORP23490 312 aaPredicted RBP2.1□□□□□ -2.07
COL8A1-204ENST00000462604 SPAG11AQ6PDA7 123 aa2.1□□□□□ -2.07
COL8A1-204ENST00000462604 PLAC8Q9NZF1 115 aa2.1□□□□□ -2.07
COL8A1-204ENST00000462604 PSORS1C2Q9UIG4 136 aa2.1□□□□□ -2.07
COL8A1-204ENST00000462604 DNAH10Q8IVF4 4471 aa2.1□□□□□ -2.07
COL8A1-204ENST00000462604 KMT2BQ9UMN6 2715 aaPredicted RBP2.09□□□□□ -2.07
COL8A1-204ENST00000462604 A6NN06 94 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms