RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 A0A0B4J2C4 111 aa13.27□□□□□ -0.29
SMKR1-201ENST00000462322 CEND1Q8N111 149 aa13.26□□□□□ -0.29
SMKR1-201ENST00000462322 ASB16-AS1Q495Z4 193 aa13.25□□□□□ -0.29
SMKR1-201ENST00000462322 PYY3Q5JQD4 70 aa13.25□□□□□ -0.29
SMKR1-201ENST00000462322 Q5XG85 94 aa13.25□□□□□ -0.29
SMKR1-201ENST00000462322 TMA7Q9Y2S6 64 aaKnown RBP13.25□□□□□ -0.29
SMKR1-201ENST00000462322 SEC61BP60468 96 aaKnown RBP13.23□□□□□ -0.29
SMKR1-201ENST00000462322 TMEM238LA0A1B0GVL6 79 aa13.22□□□□□ -0.29
SMKR1-201ENST00000462322 A6NJY4 79 aa13.22□□□□□ -0.29
SMKR1-201ENST00000462322 XP32Q5T750 250 aa13.21□□□□□ -0.29
SMKR1-201ENST00000462322 H0YGX0 51 aa13.2□□□□□ -0.3
SMKR1-201ENST00000462322 SNCGO76070 127 aa13.2□□□□□ -0.3
SMKR1-201ENST00000462322 Q6JHZ5 121 aa13.2□□□□□ -0.3
SMKR1-201ENST00000462322 PPDPFLQ8WWR9 84 aa13.2□□□□□ -0.3
SMKR1-201ENST00000462322 OCIAD2Q56VL3 154 aa13.19□□□□□ -0.3
SMKR1-201ENST00000462322 SNHG12Q9BXW3 62 aa13.19□□□□□ -0.3
SMKR1-201ENST00000462322 PRO1854Q9UHT4 67 aa13.19□□□□□ -0.3
SMKR1-201ENST00000462322 IGLV8-61A0A075B6I0 122 aa13.18□□□□□ -0.3
SMKR1-201ENST00000462322 FXYD2P54710 66 aa13.18□□□□□ -0.3
SMKR1-201ENST00000462322 C1orf195Q5TG92 126 aa13.18□□□□□ -0.3
SMKR1-201ENST00000462322 TCL1BO95988 128 aa13.17□□□□□ -0.3
SMKR1-201ENST00000462322 C9orf92A6NGG3 77 aa13.16□□□□□ -0.3
SMKR1-201ENST00000462322 CLEC2BQ92478 149 aa13.16□□□□□ -0.3
SMKR1-201ENST00000462322 FAT4Q6V0I7 4981 aa13.15□□□□□ -0.3
SMKR1-201ENST00000462322 IGFL1Q6UW32 110 aa13.15□□□□□ -0.3
SMKR1-201ENST00000462322 FAM218AQ96MZ4 157 aa13.14□□□□□ -0.31
SMKR1-201ENST00000462322 HSD52Q0P140 79 aa13.12□□□□□ -0.31
SMKR1-201ENST00000462322 TRBV7-7A0A0K0K1E9 115 aa13.09□□□□□ -0.31
SMKR1-201ENST00000462322 H3BUT2 72 aa13.09□□□□□ -0.31
SMKR1-201ENST00000462322 KRTAP4-1Q9BYQ7 146 aa13.07□□□□□ -0.32
SMKR1-201ENST00000462322 UQCR10Q9UDW1 63 aa13.07□□□□□ -0.32
SMKR1-201ENST00000462322 A0A1B0GX51 115 aa13.06□□□□□ -0.32
SMKR1-201ENST00000462322 TRIAP1O43715 76 aa13.06□□□□□ -0.32
SMKR1-201ENST00000462322 K7ERJ3 54 aa13.03□□□□□ -0.32
SMKR1-201ENST00000462322 GHRHP01286 108 aa13.03□□□□□ -0.32
SMKR1-201ENST00000462322 NDUFV3P56181 108 aaKnown RBP13.03□□□□□ -0.32
SMKR1-201ENST00000462322 PSMB2P49721 201 aa13.01□□□□□ -0.33
SMKR1-201ENST00000462322 FABP2P12104 132 aa13□□□□□ -0.33
SMKR1-201ENST00000462322 LCE2AQ5TA79 106 aaPredicted RBP13□□□□□ -0.33
SMKR1-201ENST00000462322 PCOTHQ58A44 107 aa12.99□□□□□ -0.33
SMKR1-201ENST00000462322 H3BMG7 143 aa12.96□□□□□ -0.33
SMKR1-201ENST00000462322 COX6CP09669 75 aa12.95□□□□□ -0.34
SMKR1-201ENST00000462322 DNAL4O96015 105 aa12.94□□□□□ -0.34
SMKR1-201ENST00000462322 Q6Q795 121 aa12.94□□□□□ -0.34
SMKR1-201ENST00000462322 LST1O00453 97 aa12.93□□□□□ -0.34
SMKR1-201ENST00000462322 TEN1Q86WV5 123 aa12.93□□□□□ -0.34
SMKR1-201ENST00000462322 ORMDL1Q9P0S3 153 aa12.91□□□□□ -0.34
SMKR1-201ENST00000462322 SS18L2Q9UHA2 77 aa12.91□□□□□ -0.34
SMKR1-201ENST00000462322 RPL37P61927 97 aaKnown RBP12.88□□□□□ -0.35
SMKR1-201ENST00000462322 H3BQ85 93 aa12.87□□□□□ -0.35
SMKR1-201ENST00000462322 A0A087WSZ3 146 aa12.85□□□□□ -0.35
SMKR1-201ENST00000462322 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
SMKR1-201ENST00000462322 A0A1B0GV72 72 aa12.82□□□□□ -0.36
SMKR1-201ENST00000462322 TMEM256-PLSCR3K7ERE1 68 aa12.82□□□□□ -0.36
SMKR1-201ENST00000462322 OBSCN-AS1Q96MR7 158 aa12.82□□□□□ -0.36
SMKR1-201ENST00000462322 ANKRD29Q8N6D5 301 aa12.81□□□□□ -0.36
SMKR1-201ENST00000462322 A0A1W2PNM2 257 aa12.8□□□□□ -0.36
SMKR1-201ENST00000462322 TRACP01848 142 aa12.78□□□□□ -0.36
SMKR1-201ENST00000462322 M0R143 59 aa12.74□□□□□ -0.37
SMKR1-201ENST00000462322 SMIM6P0DI80 62 aa12.74□□□□□ -0.37
SMKR1-201ENST00000462322 UBE2V1Q13404 147 aa12.74□□□□□ -0.37
SMKR1-201ENST00000462322 TRBV7-4A0A0J9YYF1 115 aa12.73□□□□□ -0.37
SMKR1-201ENST00000462322 Q96NJ1 140 aa12.73□□□□□ -0.37
SMKR1-201ENST00000462322 LCE2CQ5TA81 110 aa12.7□□□□□ -0.38
SMKR1-201ENST00000462322 Q75L30 129 aa12.7□□□□□ -0.38
SMKR1-201ENST00000462322 CCKP06307 115 aa12.69□□□□□ -0.38
SMKR1-201ENST00000462322 KRTAP19-2Q3LHN2 52 aa12.69□□□□□ -0.38
SMKR1-201ENST00000462322 ATP11AUNQ6ZP68 121 aa12.68□□□□□ -0.38
SMKR1-201ENST00000462322 SIGMAR1Q99720 223 aa12.67□□□□□ -0.38
SMKR1-201ENST00000462322 BAALC-AS2P0C853 105 aa12.64□□□□□ -0.39
SMKR1-201ENST00000462322 RBM3P98179 157 aaKnown RBP12.64□□□□□ -0.39
SMKR1-201ENST00000462322 NAA38Q9BRA0 125 aaKnown RBP12.64□□□□□ -0.39
SMKR1-201ENST00000462322 IGKV4-1P06312 121 aa12.62□□□□□ -0.39
SMKR1-201ENST00000462322 DSCR8Q96T75 97 aa12.61□□□□□ -0.39
SMKR1-201ENST00000462322 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
SMKR1-201ENST00000462322 DSCR10P59022 87 aa12.6□□□□□ -0.39
SMKR1-201ENST00000462322 KRTAP9-2Q9BYQ4 174 aa12.6□□□□□ -0.39
SMKR1-201ENST00000462322 TSTD3H0UI37 97 aa12.59□□□□□ -0.39
SMKR1-201ENST00000462322 ATXN8Q156A1 80 aa12.59□□□□□ -0.39
SMKR1-201ENST00000462322 C20orf166-AS1Q96NR2 134 aa12.59□□□□□ -0.39
SMKR1-201ENST00000462322 A8MUU9 505 aa12.56□□□□□ -0.4
SMKR1-201ENST00000462322 DEFB116Q30KQ4 102 aa12.56□□□□□ -0.4
SMKR1-201ENST00000462322 LINC00472Q9H8W2 130 aa12.56□□□□□ -0.4
SMKR1-201ENST00000462322 MT1HP80294 61 aa12.55□□□□□ -0.4
SMKR1-201ENST00000462322 LINC00313P59037 77 aa12.54□□□□□ -0.4
SMKR1-201ENST00000462322 COX6B2Q6YFQ2 88 aa12.54□□□□□ -0.4
SMKR1-201ENST00000462322 C9JAW5 83 aa12.53□□□□□ -0.4
SMKR1-201ENST00000462322 BATFQ16520 125 aa12.53□□□□□ -0.4
SMKR1-201ENST00000462322 LOC105371267A0A1B0GV96 52 aa12.5□□□□□ -0.41
SMKR1-201ENST00000462322 LYRM7Q5U5X0 104 aa12.49□□□□□ -0.41
SMKR1-201ENST00000462322 IGHV6-1A0A0B4J1U7 121 aa12.46□□□□□ -0.41
SMKR1-201ENST00000462322 JMJD7-PLA2G4BH0Y9G9 81 aa12.46□□□□□ -0.41
SMKR1-201ENST00000462322 C21orf62-AS1Q17RA5 79 aa12.46□□□□□ -0.41
SMKR1-201ENST00000462322 NOTCH2NLQ7Z3S9 236 aa12.45□□□□□ -0.42
SMKR1-201ENST00000462322 KRTAP16-1A8MUX0 517 aa12.44□□□□□ -0.42
SMKR1-201ENST00000462322 TRBV20-1A0A075B6N2 111 aa12.43□□□□□ -0.42
SMKR1-201ENST00000462322 Q6ZQT0 140 aa12.41□□□□□ -0.42
SMKR1-201ENST00000462322 LOC110117498A0A087WWA1 95 aa12.39□□□□□ -0.43
SMKR1-201ENST00000462322 M0R2T5 61 aa12.39□□□□□ -0.43
SMKR1-201ENST00000462322 A0A1B0GVX0 72 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms