RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 HECTD4Q9Y4D8 3996 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 IFITM1P13164 125 aa2.86□□□□□ -1.95
CSMD3-205ENST00000462254 RPS28P62857 69 aaKnown RBP2.86□□□□□ -1.95
CSMD3-205ENST00000462254 BVES-AS1Q5T3Y7 98 aa2.86□□□□□ -1.95
CSMD3-205ENST00000462254 SPANXA2-OT1Q8N9U9 137 aa2.86□□□□□ -1.95
CSMD3-205ENST00000462254 RYR3Q15413 4870 aa2.86□□□□□ -1.95
CSMD3-205ENST00000462254 DNAH5Q8TE73 4624 aa2.85□□□□□ -1.95
CSMD3-205ENST00000462254 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
CSMD3-205ENST00000462254 IGKV2-24A0A0C4DH68 120 aa2.85□□□□□ -1.95
CSMD3-205ENST00000462254 C16orf90A8MZG2 172 aa2.85□□□□□ -1.95
CSMD3-205ENST00000462254 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
CSMD3-205ENST00000462254 KRTAP10-5P60370 271 aa2.85□□□□□ -1.95
CSMD3-205ENST00000462254 Q5W150 140 aa2.85□□□□□ -1.95
CSMD3-205ENST00000462254 IMUPQ9GZP8 106 aa2.85□□□□□ -1.95
CSMD3-205ENST00000462254 A0A1W2PNN7 141 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 NCR3O14931 201 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 ZNF861PO60384 105 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 INAFM2P0DMQ5 153 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 FABP2P12104 132 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 KRTAP10-1P60331 282 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 DEFB116Q30KQ4 102 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 SPACA4Q8TDM5 124 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 NHP2Q9NX24 153 aaKnown RBP2.84□□□□□ -1.95
CSMD3-205ENST00000462254 LAMTOR3Q9UHA4 124 aa2.84□□□□□ -1.95
CSMD3-205ENST00000462254 A0A0B4J2C4 111 aa2.83□□□□□ -1.96
CSMD3-205ENST00000462254 A8MWP4 228 aa2.83□□□□□ -1.96
CSMD3-205ENST00000462254 F8W1H4 67 aa2.83□□□□□ -1.96
CSMD3-205ENST00000462254 K7ERJ3 54 aa2.83□□□□□ -1.96
CSMD3-205ENST00000462254 Q6ZSA8 131 aa2.83□□□□□ -1.96
CSMD3-205ENST00000462254 TMEM126AQ9H061 195 aa2.83□□□□□ -1.96
CSMD3-205ENST00000462254 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
CSMD3-205ENST00000462254 TRBV10-2A0A0K0K1G8 114 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 A0A1B0GX51 115 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 K7EP34 96 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 TAX1BP3O14907 124 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 HAMPP81172 84 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 LYRM7Q5U5X0 104 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 PHF5AQ7RTV0 110 aaKnown RBP2.82□□□□□ -1.96
CSMD3-205ENST00000462254 COPS9Q8WXC6 57 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 C22orf24Q9Y442 160 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 DNAH8Q96JB1 4490 aa2.82□□□□□ -1.96
CSMD3-205ENST00000462254 TRBV10-3A0A0K0K1G6 114 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 J3KT08 172 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 M0R378 163 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
CSMD3-205ENST00000462254 ADM2Q7Z4H4 148 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 KRTAP11-1Q8IUC1 163 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 C3orf22Q8N5N4 141 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 RAB37Q96AX2 223 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 LINC00167Q96N53 147 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 NAA38Q9BRA0 125 aaKnown RBP2.81□□□□□ -1.96
CSMD3-205ENST00000462254 PLAC8Q9NZF1 115 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 LINC00474Q9P2X8 69 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 PRO1854Q9UHT4 67 aa2.81□□□□□ -1.96
CSMD3-205ENST00000462254 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
CSMD3-205ENST00000462254 TRAV13-2A0A0B4J235 113 aa2.8□□□□□ -1.96
CSMD3-205ENST00000462254 H7C2G1 150 aa2.8□□□□□ -1.96
CSMD3-205ENST00000462254 IGLV6-57P01721 117 aa2.8□□□□□ -1.96
CSMD3-205ENST00000462254 S100A7L2Q5SY68 101 aa2.8□□□□□ -1.96
CSMD3-205ENST00000462254 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
CSMD3-205ENST00000462254 KTN1-AS1Q86SY8 53 aa2.8□□□□□ -1.96
CSMD3-205ENST00000462254 SMIM11BQ8TCY0 68 aa2.8□□□□□ -1.96
CSMD3-205ENST00000462254 SPCS1Q9Y6A9 102 aa2.8□□□□□ -1.96
CSMD3-205ENST00000462254 A0A1W2PPM0 123 aa2.79□□□□□ -1.96
CSMD3-205ENST00000462254 A6NED7 52 aa2.79□□□□□ -1.96
CSMD3-205ENST00000462254 SLC25A20O43772 301 aa2.79□□□□□ -1.96
CSMD3-205ENST00000462254 LCA10Q71F78 164 aa2.79□□□□□ -1.96
CSMD3-205ENST00000462254 DPH3Q96FX2 82 aa2.79□□□□□ -1.96
CSMD3-205ENST00000462254 LRP1BQ9NZR2 4599 aa2.78□□□□□ -1.96
CSMD3-205ENST00000462254 TRAV23DV6A0A075B6W5 121 aa2.78□□□□□ -1.96
CSMD3-205ENST00000462254 H3BUT2 72 aa2.78□□□□□ -1.96
CSMD3-205ENST00000462254 ZNF73O43830 326 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-205ENST00000462254 SPRR1AP35321 89 aa2.78□□□□□ -1.96
CSMD3-205ENST00000462254 RPL28P46779 137 aaKnown RBP2.78□□□□□ -1.96
CSMD3-205ENST00000462254 DSCR10P59022 87 aa2.78□□□□□ -1.96
CSMD3-205ENST00000462254 UBE2BP63146 152 aa2.78□□□□□ -1.96
CSMD3-205ENST00000462254 KCNQ1DNQ9H478 68 aa2.78□□□□□ -1.96
CSMD3-205ENST00000462254 APOBP04114 4563 aaKnown RBP2.77□□□□□ -1.97
CSMD3-205ENST00000462254 A8MUU9 505 aa2.77□□□□□ -1.97
CSMD3-205ENST00000462254 CLEC2BQ92478 149 aa2.77□□□□□ -1.97
CSMD3-205ENST00000462254 DIRC1Q969H9 104 aa2.77□□□□□ -1.97
CSMD3-205ENST00000462254 PSORS1C2Q9UIG4 136 aa2.77□□□□□ -1.97
CSMD3-205ENST00000462254 TRBV20-1A0A075B6N2 111 aa2.76□□□□□ -1.97
CSMD3-205ENST00000462254 TCL1BO95988 128 aa2.76□□□□□ -1.97
CSMD3-205ENST00000462254 IGLV7-43P04211 117 aa2.76□□□□□ -1.97
CSMD3-205ENST00000462254 ELOF1P60002 83 aaKnown RBP2.76□□□□□ -1.97
CSMD3-205ENST00000462254 HIST1H4AP62805 103 aaKnown RBP2.76□□□□□ -1.97
CSMD3-205ENST00000462254 PRLHP81277 87 aa2.76□□□□□ -1.97
CSMD3-205ENST00000462254 EPPK1P58107 5090 aaKnown RBP2.75□□□□□ -1.97
CSMD3-205ENST00000462254 TRBV7-6A0A0J9YX20 115 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 ETDCA0A1B0GVM5 59 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 H3BMG7 143 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 SMR3BP02814 79 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-205ENST00000462254 COX7BP24311 80 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 Q6ZRX8 168 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 PRR15Q8IV56 129 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 ST20-AS1Q8NBB2 130 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 Q9BRP9 147 aa2.75□□□□□ -1.97
CSMD3-205ENST00000462254 H0YGX0 51 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms