RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 PRO1933Q9H354 126 aa2.62□□□□□ -1.99
BRCA1-206ENST00000461574 LINC00846Q9NV44 126 aa2.62□□□□□ -1.99
BRCA1-206ENST00000461574 MYMXA0A1B0GTQ4 84 aa2.61□□□□□ -1.99
BRCA1-206ENST00000461574 TMEM223A0PJW6 202 aa2.61□□□□□ -1.99
BRCA1-206ENST00000461574 S100PP25815 95 aa2.61□□□□□ -1.99
BRCA1-206ENST00000461574 FABP9Q0Z7S8 132 aa2.61□□□□□ -1.99
BRCA1-206ENST00000461574 Q1RN00 199 aa2.61□□□□□ -1.99
BRCA1-206ENST00000461574 C1orf195Q5TG92 126 aa2.61□□□□□ -1.99
BRCA1-206ENST00000461574 ATP11AUNQ6ZP68 121 aa2.61□□□□□ -1.99
BRCA1-206ENST00000461574 LITAFQ99732 161 aa2.61□□□□□ -1.99
BRCA1-206ENST00000461574 TRBV20-1A0A075B6N2 111 aa2.6□□□□□ -1.99
BRCA1-206ENST00000461574 C20orf202A1L168 122 aa2.6□□□□□ -1.99
BRCA1-206ENST00000461574 E9PLD3 99 aa2.6□□□□□ -1.99
BRCA1-206ENST00000461574 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
BRCA1-206ENST00000461574 Q6ZVH6 145 aa2.6□□□□□ -1.99
BRCA1-206ENST00000461574 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
BRCA1-206ENST00000461574 DEFB105AQ8NG35 78 aa2.6□□□□□ -1.99
BRCA1-206ENST00000461574 A0A096LNJ9 63 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 NDUFC2O95298 119 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 TCL1BO95988 128 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 AKR1D1P51857 326 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 NPC2P61916 151 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 IFITM2Q01629 132 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 PCP2Q8IVA1 136 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 OR13C6PQ8NH95 151 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 SEC11CQ9BY50 192 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 DHRS4-AS1Q9P1J3 65 aa2.59□□□□□ -1.99
BRCA1-206ENST00000461574 FAM236DA0A1B0GTK5 79 aa2.58□□□□□ -2
BRCA1-206ENST00000461574 FAM236CP0DP71 79 aa2.58□□□□□ -2
BRCA1-206ENST00000461574 SPRR1BP22528 89 aa2.58□□□□□ -2
BRCA1-206ENST00000461574 Q5XG85 94 aa2.58□□□□□ -2
BRCA1-206ENST00000461574 NOTCH2NLQ7Z3S9 236 aa2.58□□□□□ -2
BRCA1-206ENST00000461574 LOC107984156A0A0G2JMH3 177 aa2.57□□□□□ -2
BRCA1-206ENST00000461574 KRTAP10-10P60014 251 aa2.57□□□□□ -2
BRCA1-206ENST00000461574 RHEBQ15382 184 aa2.57□□□□□ -2
BRCA1-206ENST00000461574 ARL17AQ8IVW1 177 aa2.57□□□□□ -2
BRCA1-206ENST00000461574 C18orf32Q8TCD1 76 aa2.57□□□□□ -2
BRCA1-206ENST00000461574 OBSCN-AS1Q96MR7 158 aa2.57□□□□□ -2
BRCA1-206ENST00000461574 HIST1H4GQ99525 98 aa2.57□□□□□ -2
BRCA1-206ENST00000461574 TRAV12-1A0A0B4J245 112 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 A0A0G2JQZ4 141 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 TEX49A0A1B0GTD5 131 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 A0A1B0GV90 55 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 LEPROTO15243 131 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 MT2AP02795 61 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 LGALS3P17931 250 aaKnown RBP2.56□□□□□ -2
BRCA1-206ENST00000461574 COX7BP24311 80 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 TSPEAR-AS2P59090 65 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 HERVK_113P61574 105 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 C10orf91Q5T1B1 145 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 IFI27L1Q96BM0 104 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 RPS10P5Q9NQ39 176 aa2.56□□□□□ -2
BRCA1-206ENST00000461574 F8WEM9 126 aa2.55□□□□□ -2
BRCA1-206ENST00000461574 J3QQQ9 107 aa2.55□□□□□ -2
BRCA1-206ENST00000461574 NMUP48645 174 aa2.55□□□□□ -2
BRCA1-206ENST00000461574 ELOF1P60002 83 aaKnown RBP2.55□□□□□ -2
BRCA1-206ENST00000461574 BATFQ16520 125 aa2.55□□□□□ -2
BRCA1-206ENST00000461574 SPANXCQ9NY87 97 aa2.55□□□□□ -2
BRCA1-206ENST00000461574 TRAPPC1Q9Y5R8 145 aa2.55□□□□□ -2
BRCA1-206ENST00000461574 DLEU1O43261 78 aa2.54□□□□□ -2
BRCA1-206ENST00000461574 MT1FP04733 61 aa2.54□□□□□ -2
BRCA1-206ENST00000461574 C6orf99Q4VX62 202 aa2.54□□□□□ -2
BRCA1-206ENST00000461574 SOSTDC1Q6X4U4 206 aa2.54□□□□□ -2
BRCA1-206ENST00000461574 Q96NJ1 140 aa2.54□□□□□ -2
BRCA1-206ENST00000461574 C20orf166-AS1Q96NR2 134 aa2.54□□□□□ -2
BRCA1-206ENST00000461574 C12orf57Q99622 126 aa2.54□□□□□ -2
BRCA1-206ENST00000461574 NEBP20929 6669 aa2.53□□□□□ -2
BRCA1-206ENST00000461574 PLNP26678 52 aa2.53□□□□□ -2
BRCA1-206ENST00000461574 PMAIP1Q13794 54 aa2.53□□□□□ -2
BRCA1-206ENST00000461574 SCGB1D4Q6XE38 83 aa2.53□□□□□ -2
BRCA1-206ENST00000461574 SPANXDQ9BXN6 97 aa2.53□□□□□ -2
BRCA1-206ENST00000461574 SS18L2Q9UHA2 77 aa2.53□□□□□ -2
BRCA1-206ENST00000461574 KRTAP16-1A8MUX0 517 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 C8orf87E5RJ46 101 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 NDUFS5O43920 106 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 SMIM6P0DI80 62 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 DSCR10P59022 87 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 ADAMTSL4-AS1Q5T5F5 129 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 IGFL1Q6UW32 110 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 CHCHD1Q96BP2 118 aaKnown RBP2.52□□□□□ -2.01
BRCA1-206ENST00000461574 RBM12B-AS1Q9P1G2 102 aa2.52□□□□□ -2.01
BRCA1-206ENST00000461574 IGLV5-48A0A075B6I7 105 aa2.51□□□□□ -2.01
BRCA1-206ENST00000461574 A0A0J9YXY3 114 aa2.51□□□□□ -2.01
BRCA1-206ENST00000461574 PSPHP1O15172 72 aa2.51□□□□□ -2.01
BRCA1-206ENST00000461574 DPM2O94777 84 aa2.51□□□□□ -2.01
BRCA1-206ENST00000461574 PSMB2P49721 201 aa2.51□□□□□ -2.01
BRCA1-206ENST00000461574 KRTAP19-6Q3LI70 58 aa2.51□□□□□ -2.01
BRCA1-206ENST00000461574 VPS25Q9BRG1 176 aa2.51□□□□□ -2.01
BRCA1-206ENST00000461574 NHP2Q9NX24 153 aaKnown RBP2.51□□□□□ -2.01
BRCA1-206ENST00000461574 TRBV7-6A0A0J9YX20 115 aa2.5□□□□□ -2.01
BRCA1-206ENST00000461574 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
BRCA1-206ENST00000461574 TMEM218A2RU14 115 aa2.5□□□□□ -2.01
BRCA1-206ENST00000461574 IGKCP01834 107 aa2.5□□□□□ -2.01
BRCA1-206ENST00000461574 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
BRCA1-206ENST00000461574 LINC00308Q8TCZ7 52 aa2.5□□□□□ -2.01
BRCA1-206ENST00000461574 CLEC2BQ92478 149 aa2.5□□□□□ -2.01
BRCA1-206ENST00000461574 A0A1B0GX51 115 aa2.49□□□□□ -2.01
BRCA1-206ENST00000461574 LST1O00453 97 aa2.49□□□□□ -2.01
BRCA1-206ENST00000461574 LEPROTL1O95214 131 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms